BLASTX nr result

ID: Cimicifuga21_contig00023703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023703
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454847.1| hypothetical protein SORBIDRAFT_04g038420 [S...    50   1e-09
gb|AAF79718.1|AC020889_26 T1N15.2 [Arabidopsis thaliana]               49   3e-09
dbj|BAJ34113.1| unnamed protein product [Thellungiella halophila]      49   3e-09
ref|XP_002894111.1| hypothetical protein ARALYDRAFT_473977 [Arab...    49   3e-09
ref|NP_849784.1| protein argonaute [Arabidopsis thaliana] gi|334...    49   3e-09

>ref|XP_002454847.1| hypothetical protein SORBIDRAFT_04g038420 [Sorghum bicolor]
           gi|241934678|gb|EES07823.1| hypothetical protein
           SORBIDRAFT_04g038420 [Sorghum bicolor]
          Length = 1028

 Score = 50.1 bits (118), Expect(2) = 1e-09
 Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 6/38 (15%)
 Frame = +2

Query: 824 VEASQDWPDITKYAGLVCVQDHR------LFKVWHELQ 919
           V ASQDWP++TKYAGLVC Q HR      L+KVW + Q
Sbjct: 758 VVASQDWPEVTKYAGLVCAQAHRQELIEDLYKVWQDPQ 795



 Score = 39.7 bits (91), Expect(2) = 1e-09
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 699 DVTHPHPGEDSCPSIATVI 755
           DVTHPHPGEDS PSIA V+
Sbjct: 741 DVTHPHPGEDSSPSIAAVV 759


>gb|AAF79718.1|AC020889_26 T1N15.2 [Arabidopsis thaliana]
          Length = 1123

 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 24/38 (63%), Positives = 26/38 (68%), Gaps = 6/38 (15%)
 Frame = +2

Query: 824 VEASQDWPDITKYAGLVCVQDHR------LFKVWHELQ 919
           V ASQDWP+ITKYAGLVC Q HR      LFK W + Q
Sbjct: 837 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQ 874



 Score = 39.7 bits (91), Expect(2) = 3e-09
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 699 DVTHPHPGEDSCPSIATVI 755
           DVTHPHPGEDS PSIA V+
Sbjct: 820 DVTHPHPGEDSSPSIAAVV 838


>dbj|BAJ34113.1| unnamed protein product [Thellungiella halophila]
          Length = 1084

 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 24/38 (63%), Positives = 26/38 (68%), Gaps = 6/38 (15%)
 Frame = +2

Query: 824 VEASQDWPDITKYAGLVCVQDHR------LFKVWHELQ 919
           V ASQDWP+ITKYAGLVC Q HR      LFK W + Q
Sbjct: 813 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQ 850



 Score = 39.7 bits (91), Expect(2) = 3e-09
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 699 DVTHPHPGEDSCPSIATVI 755
           DVTHPHPGEDS PSIA V+
Sbjct: 796 DVTHPHPGEDSSPSIAAVV 814


>ref|XP_002894111.1| hypothetical protein ARALYDRAFT_473977 [Arabidopsis lyrata subsp.
           lyrata] gi|297339953|gb|EFH70370.1| hypothetical protein
           ARALYDRAFT_473977 [Arabidopsis lyrata subsp. lyrata]
          Length = 1052

 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 24/38 (63%), Positives = 26/38 (68%), Gaps = 6/38 (15%)
 Frame = +2

Query: 824 VEASQDWPDITKYAGLVCVQDHR------LFKVWHELQ 919
           V ASQDWP+ITKYAGLVC Q HR      LFK W + Q
Sbjct: 781 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQ 818



 Score = 39.7 bits (91), Expect(2) = 3e-09
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 699 DVTHPHPGEDSCPSIATVI 755
           DVTHPHPGEDS PSIA V+
Sbjct: 764 DVTHPHPGEDSSPSIAAVV 782


>ref|NP_849784.1| protein argonaute [Arabidopsis thaliana]
           gi|334183151|ref|NP_001185169.1| protein argonaute
           [Arabidopsis thaliana] gi|332194167|gb|AEE32288.1|
           protein argonaute [Arabidopsis thaliana]
           gi|332194168|gb|AEE32289.1| protein argonaute
           [Arabidopsis thaliana]
          Length = 1050

 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 24/38 (63%), Positives = 26/38 (68%), Gaps = 6/38 (15%)
 Frame = +2

Query: 824 VEASQDWPDITKYAGLVCVQDHR------LFKVWHELQ 919
           V ASQDWP+ITKYAGLVC Q HR      LFK W + Q
Sbjct: 779 VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQ 816



 Score = 39.7 bits (91), Expect(2) = 3e-09
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 699 DVTHPHPGEDSCPSIATVI 755
           DVTHPHPGEDS PSIA V+
Sbjct: 762 DVTHPHPGEDSSPSIAAVV 780


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