BLASTX nr result

ID: Cimicifuga21_contig00023701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023701
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554413.1| PREDICTED: cullin-3A-like [Glycine max]           241   4e-62
ref|XP_003543771.1| PREDICTED: cullin-3A-like [Glycine max]           241   4e-62
emb|CBI22194.3| unnamed protein product [Vitis vinifera]              239   2e-61
gb|ABR17308.1| unknown [Picea sitchensis]                             239   2e-61
ref|XP_002283300.1| PREDICTED: cullin-3B [Vitis vinifera] gi|147...   239   2e-61

>ref|XP_003554413.1| PREDICTED: cullin-3A-like [Glycine max]
          Length = 733

 Score =  241 bits (615), Expect = 4e-62
 Identities = 120/131 (91%), Positives = 125/131 (95%)
 Frame = -3

Query: 438 CVKGKNVLGKEPMSKDIGEDDVFFFNDKFTSKFYKVKIGTVAAQKESEPENQETRQKVEE 259
           CVKGKNVL KEPMSKDI EDD FFFNDKFTSKF+KVKIGTV AQ+ESEPEN ETRQ+VEE
Sbjct: 603 CVKGKNVLRKEPMSKDIAEDDAFFFNDKFTSKFFKVKIGTVVAQRESEPENLETRQRVEE 662

Query: 258 DRKPQIEAAVVRIMKSRRVLDHNNLVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD 79
           DRKPQIEAA+VRIMKSRR LDHNN+VAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD
Sbjct: 663 DRKPQIEAAIVRIMKSRRTLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD 722

Query: 78  KVDRKLYRYLA 46
           KVDRKLYRYLA
Sbjct: 723 KVDRKLYRYLA 733


>ref|XP_003543771.1| PREDICTED: cullin-3A-like [Glycine max]
          Length = 733

 Score =  241 bits (615), Expect = 4e-62
 Identities = 120/131 (91%), Positives = 125/131 (95%)
 Frame = -3

Query: 438 CVKGKNVLGKEPMSKDIGEDDVFFFNDKFTSKFYKVKIGTVAAQKESEPENQETRQKVEE 259
           CVKGKNVL KEPMSKDI EDD FFFNDKFTSKF+KVKIGTV AQ+ESEPEN ETRQ+VEE
Sbjct: 603 CVKGKNVLRKEPMSKDIAEDDAFFFNDKFTSKFFKVKIGTVVAQRESEPENLETRQRVEE 662

Query: 258 DRKPQIEAAVVRIMKSRRVLDHNNLVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD 79
           DRKPQIEAA+VRIMKSRR LDHNN+VAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD
Sbjct: 663 DRKPQIEAAIVRIMKSRRTLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD 722

Query: 78  KVDRKLYRYLA 46
           KVDRKLYRYLA
Sbjct: 723 KVDRKLYRYLA 733


>emb|CBI22194.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  239 bits (610), Expect = 2e-61
 Identities = 118/131 (90%), Positives = 126/131 (96%)
 Frame = -3

Query: 438 CVKGKNVLGKEPMSKDIGEDDVFFFNDKFTSKFYKVKIGTVAAQKESEPENQETRQKVEE 259
           CVKGKN+L KEPMSKDI EDD FF NDKF+SKFYKVKIGTV AQ+ESEPENQETRQ+VEE
Sbjct: 594 CVKGKNILRKEPMSKDIAEDDAFFVNDKFSSKFYKVKIGTVVAQRESEPENQETRQRVEE 653

Query: 258 DRKPQIEAAVVRIMKSRRVLDHNNLVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD 79
           DRKPQIEAA+VRIMKSRRVLDHNN+VAEVTKQLQSRFLP+PV+IKKRIESLIEREFLERD
Sbjct: 654 DRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPSPVLIKKRIESLIEREFLERD 713

Query: 78  KVDRKLYRYLA 46
           KVDRKLYRYLA
Sbjct: 714 KVDRKLYRYLA 724


>gb|ABR17308.1| unknown [Picea sitchensis]
          Length = 735

 Score =  239 bits (610), Expect = 2e-61
 Identities = 117/131 (89%), Positives = 127/131 (96%)
 Frame = -3

Query: 438 CVKGKNVLGKEPMSKDIGEDDVFFFNDKFTSKFYKVKIGTVAAQKESEPENQETRQKVEE 259
           CVKG+NVLGKEPMSKDIGE+D F+FN+KF+SKFYKVKIGTVAAQKE+EPE QETRQ+VEE
Sbjct: 605 CVKGRNVLGKEPMSKDIGEEDDFYFNEKFSSKFYKVKIGTVAAQKETEPEKQETRQRVEE 664

Query: 258 DRKPQIEAAVVRIMKSRRVLDHNNLVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD 79
           DRKPQIEAA+VRIMK+RRVLDHNN+VAEVTKQLQSRFLPNP VIKKRIESLIEREFLERD
Sbjct: 665 DRKPQIEAAIVRIMKARRVLDHNNIVAEVTKQLQSRFLPNPAVIKKRIESLIEREFLERD 724

Query: 78  KVDRKLYRYLA 46
           K DRKLYRYLA
Sbjct: 725 KTDRKLYRYLA 735


>ref|XP_002283300.1| PREDICTED: cullin-3B [Vitis vinifera] gi|147833364|emb|CAN72935.1|
           hypothetical protein VITISV_020617 [Vitis vinifera]
          Length = 733

 Score =  239 bits (610), Expect = 2e-61
 Identities = 118/131 (90%), Positives = 126/131 (96%)
 Frame = -3

Query: 438 CVKGKNVLGKEPMSKDIGEDDVFFFNDKFTSKFYKVKIGTVAAQKESEPENQETRQKVEE 259
           CVKGKN+L KEPMSKDI EDD FF NDKF+SKFYKVKIGTV AQ+ESEPENQETRQ+VEE
Sbjct: 603 CVKGKNILRKEPMSKDIAEDDAFFVNDKFSSKFYKVKIGTVVAQRESEPENQETRQRVEE 662

Query: 258 DRKPQIEAAVVRIMKSRRVLDHNNLVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD 79
           DRKPQIEAA+VRIMKSRRVLDHNN+VAEVTKQLQSRFLP+PV+IKKRIESLIEREFLERD
Sbjct: 663 DRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPSPVLIKKRIESLIEREFLERD 722

Query: 78  KVDRKLYRYLA 46
           KVDRKLYRYLA
Sbjct: 723 KVDRKLYRYLA 733


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