BLASTX nr result
ID: Cimicifuga21_contig00023693
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00023693
(777 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxy... 206 7e-78
emb|CBI25318.3| unnamed protein product [Vitis vinifera] 206 7e-76
ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygen... 181 6e-68
ref|XP_002878015.1| SET domain-containing protein [Arabidopsis l... 186 1e-66
ref|NP_191068.2| SET domain-containing protein [Arabidopsis thal... 180 1e-63
>ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
subunit N-methyltransferase, chloroplastic-like [Vitis
vinifera]
Length = 480
Score = 206 bits (523), Expect(2) = 7e-78
Identities = 103/174 (59%), Positives = 134/174 (77%)
Frame = +2
Query: 254 YGKFPNSTLLLDFGFTLSYNIYDQVQIQMNVPQHDPLHTEKLEILHKHSAAIVKDASSLD 433
YGKFPN+TLLLDFGFTL YNIYDQVQIQ+N+P HD L T KLE+LH+H + D +S
Sbjct: 266 YGKFPNATLLLDFGFTLPYNIYDQVQIQVNIPHHDLLRTLKLELLHRHCPPKIGDVNSFS 325
Query: 434 SHQDCFIIKEVRSAKGKGKGIPQSLRAFSRVLCADTFQELKDLELEAVQTDGRVARRPLK 613
S + F IKEV+SA+GKG+GIPQSLRAF+R+ C + QEL DL +EA Q DGR+ARRPLK
Sbjct: 326 SMGNSFTIKEVKSARGKGRGIPQSLRAFARIFCCTSPQELSDLAVEAAQNDGRLARRPLK 385
Query: 614 NTSREIQSHELLLSRITHLIQDYDASVKSLKVVNSDCNDGKLAIRRRMAQDLLS 775
+ +REIQ+H++LLS IT LI +Y+ S+KSL + + A+R++MA+DLL+
Sbjct: 386 SWNREIQAHQVLLSWITRLINEYNTSIKSLPLASPLYE--TFALRKQMARDLLT 437
Score = 111 bits (278), Expect(2) = 7e-78
Identities = 52/92 (56%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 EYLALKPALDQFPR-IFKDTTLTDFVHAFALVASRAWGSSRAVSLVPFADFLNHDGVSEA 177
++LA+KP L F +FKD +L +F+HA ALV SRAWGS++ +SL+PFADF+NHDG S++
Sbjct: 178 DFLAIKPVLHHFSENLFKDISLKEFMHACALVGSRAWGSTKGLSLIPFADFVNHDGFSDS 237
Query: 178 MLLTDEDKQISEVIADQDYAPGFSKIWKISQF 273
+LL DEDKQ+SEVIAD++YAPG + + +F
Sbjct: 238 VLLGDEDKQLSEVIADRNYAPGEQVLIRYGKF 269
>emb|CBI25318.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 206 bits (523), Expect(2) = 7e-76
Identities = 103/174 (59%), Positives = 134/174 (77%)
Frame = +2
Query: 254 YGKFPNSTLLLDFGFTLSYNIYDQVQIQMNVPQHDPLHTEKLEILHKHSAAIVKDASSLD 433
YGKFPN+TLLLDFGFTL YNIYDQVQIQ+N+P HD L T KLE+LH+H + D +S
Sbjct: 273 YGKFPNATLLLDFGFTLPYNIYDQVQIQVNIPHHDLLRTLKLELLHRHCPPKIGDVNSFS 332
Query: 434 SHQDCFIIKEVRSAKGKGKGIPQSLRAFSRVLCADTFQELKDLELEAVQTDGRVARRPLK 613
S + F IKEV+SA+GKG+GIPQSLRAF+R+ C + QEL DL +EA Q DGR+ARRPLK
Sbjct: 333 SMGNSFTIKEVKSARGKGRGIPQSLRAFARIFCCTSPQELSDLAVEAAQNDGRLARRPLK 392
Query: 614 NTSREIQSHELLLSRITHLIQDYDASVKSLKVVNSDCNDGKLAIRRRMAQDLLS 775
+ +REIQ+H++LLS IT LI +Y+ S+KSL + + A+R++MA+DLL+
Sbjct: 393 SWNREIQAHQVLLSWITRLINEYNTSIKSLPLASPLYE--TFALRKQMARDLLT 444
Score = 105 bits (261), Expect(2) = 7e-76
Identities = 52/98 (53%), Positives = 73/98 (74%), Gaps = 7/98 (7%)
Frame = +1
Query: 1 EYLALKPALDQFPR-IFKDTTLTDFVHAFALVASRAWGSSRAVSLVPFADFLNHDGVSEA 177
++LA+KP L F +FKD +L +F+HA ALV SRAWGS++ +SL+PFADF+NHDG S++
Sbjct: 179 DFLAIKPVLHHFSENLFKDISLKEFMHACALVGSRAWGSTKGLSLIPFADFVNHDGFSDS 238
Query: 178 MLLTDEDKQIS------EVIADQDYAPGFSKIWKISQF 273
+LL DEDKQ+S EVIAD++YAPG + + +F
Sbjct: 239 VLLGDEDKQLSESSSTLEVIADRNYAPGEQVLIRYGKF 276
>ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
N-methyltransferase [Medicago truncatula]
gi|355481825|gb|AES63028.1| Ribulose-1,5 bisphosphate
carboxylase/oxygenase large subunit N-methyltransferase
[Medicago truncatula]
Length = 451
Score = 181 bits (459), Expect(2) = 6e-68
Identities = 91/173 (52%), Positives = 124/173 (71%)
Frame = +2
Query: 254 YGKFPNSTLLLDFGFTLSYNIYDQVQIQMNVPQHDPLHTEKLEILHKHSAAIVKDASSLD 433
YGKF N+TL+LDFGFT+ YNIYDQVQIQ ++P++DPL KLE+L ++ KDA
Sbjct: 257 YGKFSNATLMLDFGFTIPYNIYDQVQIQYDIPKYDPLRHTKLELLQQYFVPPTKDAKGSK 316
Query: 434 SHQDCFIIKEVRSAKGKGKGIPQSLRAFSRVLCADTFQELKDLELEAVQTDGRVARRPLK 613
+ F IKEV+SA GKGKG+PQSLRA +RVL T QEL L +EA QTDGR+AR PL+
Sbjct: 317 YSVNSFAIKEVKSAGGKGKGVPQSLRALARVLSCTTLQELNHLVMEAAQTDGRLARHPLQ 376
Query: 614 NTSREIQSHELLLSRITHLIQDYDASVKSLKVVNSDCNDGKLAIRRRMAQDLL 772
+ +EIQ+H++L S LI +++A++ SL +S + +L +RR+MA+DLL
Sbjct: 377 DRIKEIQAHKMLSSLFIQLIGEHNATITSLDSCDSSSSSERLPVRRQMARDLL 429
Score = 103 bits (256), Expect(2) = 6e-68
Identities = 45/91 (49%), Positives = 66/91 (72%)
Frame = +1
Query: 1 EYLALKPALDQFPRIFKDTTLTDFVHAFALVASRAWGSSRAVSLVPFADFLNHDGVSEAM 180
++L +KP F + F D T DF+HA LV SRAWGS++ +SL+PFADFLNHDG+SEA+
Sbjct: 170 DFLEIKPVFQPFCQSFGDFTWKDFMHACTLVGSRAWGSTKGLSLIPFADFLNHDGISEAI 229
Query: 181 LLTDEDKQISEVIADQDYAPGFSKIWKISQF 273
+++D+D + SEV +D+DY PG + + +F
Sbjct: 230 VMSDDDNKCSEVFSDRDYVPGEQVLIRYGKF 260
>ref|XP_002878015.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297323853|gb|EFH54274.1| SET domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 186 bits (473), Expect(2) = 1e-66
Identities = 94/173 (54%), Positives = 122/173 (70%)
Frame = +2
Query: 254 YGKFPNSTLLLDFGFTLSYNIYDQVQIQMNVPQHDPLHTEKLEILHKHSAAIVKDASSLD 433
YG+F N+TL+LDFGFT+ YNI+D+VQIQM+VP DPL KL +L H IVKD +
Sbjct: 267 YGEFSNATLMLDFGFTVPYNIHDEVQIQMDVPNDDPLRDMKLGLLQTHHTRIVKDINIFH 326
Query: 434 SHQDCFIIKEVRSAKGKGKGIPQSLRAFSRVLCADTFQELKDLELEAVQTDGRVARRPLK 613
S D F IKEV+S GKG+GIPQSLRAF+RVLC QEL DL EA + DGR+AR P K
Sbjct: 327 SSCDTFTIKEVKSTSGKGRGIPQSLRAFARVLCCTIPQELNDLSKEAAKNDGRLARLPFK 386
Query: 614 NTSREIQSHELLLSRITHLIQDYDASVKSLKVVNSDCNDGKLAIRRRMAQDLL 772
+ SRE+++H++LLS I LI+D+ A +K L+ + A+RR+MA+DLL
Sbjct: 387 DRSRELEAHKILLSHINRLIEDHSACIKELEESKCYFVSQRFAVRRKMAKDLL 439
Score = 93.2 bits (230), Expect(2) = 1e-66
Identities = 40/80 (50%), Positives = 61/80 (76%)
Frame = +1
Query: 34 FPRIFKDTTLTDFVHAFALVASRAWGSSRAVSLVPFADFLNHDGVSEAMLLTDEDKQISE 213
+P + + L DF++A+ALV SRAW +S+ +SL+PFADF+NHDG+S +++L+DED Q+SE
Sbjct: 191 YPMVIERPYLEDFMYAYALVGSRAWETSKGISLIPFADFMNHDGLSASIVLSDEDNQLSE 250
Query: 214 VIADQDYAPGFSKIWKISQF 273
V AD++Y+PG K +F
Sbjct: 251 VTADRNYSPGDEVFIKYGEF 270
>ref|NP_191068.2| SET domain-containing protein [Arabidopsis thaliana]
gi|56236044|gb|AAV84478.1| At3g55080 [Arabidopsis
thaliana] gi|59958342|gb|AAX12881.1| At3g55080
[Arabidopsis thaliana] gi|332645816|gb|AEE79337.1| SET
domain-containing protein [Arabidopsis thaliana]
Length = 463
Score = 180 bits (457), Expect(2) = 1e-63
Identities = 94/175 (53%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Frame = +2
Query: 254 YGKFPNSTLLLDFGFTLSYNIYDQVQIQMNVPQHDPLHTEKLEILHKHSAAIVKDASSLD 433
YG+F N+TL+LDFGFT YNI+D+VQIQM+VP DPL KL +L H VKD +
Sbjct: 267 YGEFSNATLMLDFGFTFPYNIHDEVQIQMDVPNDDPLRNMKLGLLQTHHTRTVKDINIFH 326
Query: 434 SHQDCFIIKEVRSAKGKGKGIPQSLRAFSRVLCADTFQELKDLELEAVQTDGRVARRPLK 613
S D F IKEV+SA GKGKGIPQSLRAF+RVLC QEL DL EA Q DGR+AR P K
Sbjct: 327 SSCDTFTIKEVKSAIGKGKGIPQSLRAFARVLCCIIPQELNDLSKEAAQNDGRLARLPFK 386
Query: 614 NTSREIQSHELLLSRITHLIQDYDASVKSLKVVNSDCN--DGKLAIRRRMAQDLL 772
+ +RE+++H++LLS I LI+D+ +K ++ +C + A+RR+MA+DLL
Sbjct: 387 DGNRELEAHKILLSHINRLIEDHSVCIKEME----ECYFVSQRFAVRRQMARDLL 437
Score = 89.7 bits (221), Expect(2) = 1e-63
Identities = 40/79 (50%), Positives = 59/79 (74%)
Frame = +1
Query: 37 PRIFKDTTLTDFVHAFALVASRAWGSSRAVSLVPFADFLNHDGVSEAMLLTDEDKQISEV 216
P + + L DF++A+ALV SRAW +S+ +SL+PFADF+NHDG+S +++L DED Q+SEV
Sbjct: 192 PIVTERPDLEDFMYAYALVGSRAWENSKRISLIPFADFMNHDGLSASIVLRDEDNQLSEV 251
Query: 217 IADQDYAPGFSKIWKISQF 273
AD++Y+PG K +F
Sbjct: 252 TADRNYSPGDEVFIKYGEF 270