BLASTX nr result

ID: Cimicifuga21_contig00023685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023685
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24978.3| unnamed protein product [Vitis vinifera]              207   3e-51
ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...   206   6e-51
ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro...   202   8e-50
emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]   200   3e-49
ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ric...   192   7e-47

>emb|CBI24978.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  207 bits (526), Expect = 3e-51
 Identities = 102/163 (62%), Positives = 125/163 (76%), Gaps = 2/163 (1%)
 Frame = -3

Query: 584 LSSDQRVASLRSTDSTGIRTLCYNPCSSLVFAGSTYGYLHCWDLRTMKLLWEKRASTNVI 405
           LSSDQR+A LRSTDSTGIRTLC+NP S LVF+GST GY  CWDLRTM+ LWE R S NVI
Sbjct: 265 LSSDQRIAKLRSTDSTGIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNVI 324

Query: 404 YSVQHMRNDTLSLVVGGIDGVLRILNQNTGDLLSSYVIGQGSMREASSENRYCV--GKAR 231
           YS+QH+ +DT +LV GGIDGVLRIL+QNTG ++S  V+       +S +    +   K R
Sbjct: 325 YSMQHLCSDTHTLVAGGIDGVLRILDQNTGKVVSGCVMDDSPAPTSSQKTDSIIERKKGR 384

Query: 230 KLSEDTHLDSVPKHLRPPVTCLAVGMRKVVTTHNSSVIRVWKF 102
           +++EDT +DS+PK  RPP+TCLAVGM+KVVTTHN   IR+WKF
Sbjct: 385 RITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKF 427


>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  206 bits (524), Expect = 6e-51
 Identities = 99/166 (59%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
 Frame = -3

Query: 584 LSSDQRVASLRSTDSTGIRTLCYNPCSSLVFAGSTYGYLHCWDLRTMKLLWEKRASTNVI 405
           LSSDQRVA+LR TDSTGI++LC+NP S  VFAG+T GY  CWDLRTM+ LW+ R S NV+
Sbjct: 276 LSSDQRVATLRPTDSTGIKSLCFNPVSHQVFAGTTAGYASCWDLRTMRQLWKTRVSPNVV 335

Query: 404 YSVQHMRNDTLSLVVGGIDGVLRILNQNTGDLLSSYVIGQGSMREASSENRYCVGK-ARK 228
           YS+QHMR+DT +LVVGGIDGVLR+L+QNTG++LSSYV+  G+   +   +     K  ++
Sbjct: 336 YSLQHMRSDTSTLVVGGIDGVLRVLDQNTGEVLSSYVMDHGTSTSSGYTHGVIERKIGKR 395

Query: 227 LSEDTHLDSVPKHLRPPVTCLAVGMRKVVTTHNSSVIRVWKFDS*R 90
           L  D ++D +PK +RPP+TCLAVGM+KV+TTHN   IR+WKF++ R
Sbjct: 396 LPYDYNIDRIPKTVRPPITCLAVGMQKVITTHNIKNIRMWKFNNLR 441


>ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Vitis vinifera]
          Length = 421

 Score =  202 bits (514), Expect = 8e-50
 Identities = 102/164 (62%), Positives = 125/164 (76%), Gaps = 3/164 (1%)
 Frame = -3

Query: 584 LSSDQRVASLRSTDSTG-IRTLCYNPCSSLVFAGSTYGYLHCWDLRTMKLLWEKRASTNV 408
           LSSDQR+A LRSTDSTG IRTLC+NP S LVF+GST GY  CWDLRTM+ LWE R S NV
Sbjct: 250 LSSDQRIAKLRSTDSTGGIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNV 309

Query: 407 IYSVQHMRNDTLSLVVGGIDGVLRILNQNTGDLLSSYVIGQGSMREASSENRYCV--GKA 234
           IYS+QH+ +DT +LV GGIDGVLRIL+QNTG ++S  V+       +S +    +   K 
Sbjct: 310 IYSMQHLCSDTHTLVAGGIDGVLRILDQNTGKVVSGCVMDDSPAPTSSQKTDSIIERKKG 369

Query: 233 RKLSEDTHLDSVPKHLRPPVTCLAVGMRKVVTTHNSSVIRVWKF 102
           R+++EDT +DS+PK  RPP+TCLAVGM+KVVTTHN   IR+WKF
Sbjct: 370 RRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKF 413


>emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]
          Length = 471

 Score =  200 bits (509), Expect = 3e-49
 Identities = 101/164 (61%), Positives = 124/164 (75%), Gaps = 3/164 (1%)
 Frame = -3

Query: 584 LSSDQRVASLRSTDSTG-IRTLCYNPCSSLVFAGSTYGYLHCWDLRTMKLLWEKRASTNV 408
           LSSDQR+A LRSTDSTG IRTLC+NP S LVF+GST GY  CWDLRTM+ LWE R S N 
Sbjct: 300 LSSDQRIAKLRSTDSTGGIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNX 359

Query: 407 IYSVQHMRNDTLSLVVGGIDGVLRILNQNTGDLLSSYVIGQGSMREASSENRYCV--GKA 234
           IYS+QH+ +DT +LV GGIDGVLRIL+QNTG ++S  V+       +S +    +   K 
Sbjct: 360 IYSMQHLCSDTHTLVAGGIDGVLRILDQNTGKVVSGCVMDDSPAPTSSQKTDSIIERKKG 419

Query: 233 RKLSEDTHLDSVPKHLRPPVTCLAVGMRKVVTTHNSSVIRVWKF 102
           R+++EDT +DS+PK  RPP+TCLAVGM+KVVTTHN   IR+WKF
Sbjct: 420 RRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKF 463


>ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223543025|gb|EEF44560.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 336

 Score =  192 bits (489), Expect = 7e-47
 Identities = 95/162 (58%), Positives = 118/162 (72%), Gaps = 2/162 (1%)
 Frame = -3

Query: 581 SSDQRVASLRSTDSTGIRTLCYNPCSSLVFAGSTYGYLHCWDLRTMKLLWEKRASTNVIY 402
           SSDQ +A+L+ TDSTGI+TLC+NP S +VF+G+  GY  CWDLR M+ +WE R S NV+Y
Sbjct: 173 SSDQCIATLKPTDSTGIKTLCFNPRSHMVFSGTAAGYTSCWDLRMMRRVWETRVSPNVVY 232

Query: 401 SVQHMRNDTLSLVVGGIDGVLRILNQNTGDLLSSYVIGQ--GSMREASSENRYCVGKARK 228
           S+QH+ ND  SLVVGGIDGVLRIL+QN+G +LSSYVI    GS     S       K + 
Sbjct: 233 SLQHLSNDKSSLVVGGIDGVLRILDQNSGIILSSYVIDHDAGSSSSGYSHGTIERRKGKS 292

Query: 227 LSEDTHLDSVPKHLRPPVTCLAVGMRKVVTTHNSSVIRVWKF 102
           L  +T +D +P+  RP +TCLAVGM+KVVTTHNS  IRVWKF
Sbjct: 293 LPSETIIDQIPRSSRPSITCLAVGMKKVVTTHNSKYIRVWKF 334


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