BLASTX nr result

ID: Cimicifuga21_contig00023661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023661
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311131.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_004143592.1| PREDICTED: uncharacterized protein LOC101219...    75   2e-11
ref|XP_002879791.1| SAC3/GANP family protein [Arabidopsis lyrata...    72   1e-10
ref|XP_002525081.1| leukocyte receptor cluster (lrc) member, put...    72   1e-10
ref|XP_003536783.1| PREDICTED: uncharacterized protein LOC100778...    72   2e-10

>ref|XP_002311131.1| predicted protein [Populus trichocarpa] gi|222850951|gb|EEE88498.1|
           predicted protein [Populus trichocarpa]
          Length = 964

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = -1

Query: 448 GGNTDTMPQLDLSSLQ---VVDPTQGGSSAYSPLNPGVASTTGSKAVSWTLQWTDNRSTE 278
           G NT T+  +D +SL+   VVD +QG +S+Y+P      +   S+A  WT+   DN STE
Sbjct: 4   GVNTQTIASVDPNSLEGRYVVDVSQGQTSSYNP------TAYESEAAPWTMHRVDNHSTE 57

Query: 277 NGVTPNSSYHHSQRAEPLARDVQDGPNAAPQAVASSSLGSSHGPQEHA 134
           NG+  NSSYHH  R + LAR  QD  N A  A +SS+ G+    Q+H+
Sbjct: 58  NGILSNSSYHHDHRTQQLARSAQDSLNTASLA-SSSTQGTMSVTQDHS 104


>ref|XP_004143592.1| PREDICTED: uncharacterized protein LOC101219647 [Cucumis sativus]
           gi|449507553|ref|XP_004163064.1| PREDICTED:
           uncharacterized LOC101219647 [Cucumis sativus]
          Length = 1001

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
 Frame = -1

Query: 448 GGNTDTMPQLDLSSLQ---VVDPTQG-GSSAYSPLNPGVASTTGSKAVSWTLQWTDNRST 281
           GGNT+T      SSL+   + D  Q   +S Y PL       +  +A++W     D  S 
Sbjct: 4   GGNTETFVPAQPSSLENQHIGDGNQSVAASTYLPL------ASAPEAITWANHKVDGSSN 57

Query: 280 ENGVTPNSSYHHSQRAEPLARDVQDGPNAAPQAVASSSLGSSHGPQEHAXXXXXXXXXXX 101
           E+G+  NS+Y ++Q+  P AR+VQDG N +  A +SSS  +S+ PQ++            
Sbjct: 58  ESGLLSNSTYQYNQQVLPPARNVQDGLNVSSVACSSSSFVTSNAPQDYNAYAQYSNSTDP 117

Query: 100 XXXXXXXXXXXXXXYQQQTSNMYPQQVGTYQNT 2
                         YQQQ ++ Y Q VG YQNT
Sbjct: 118 YGYANAGYQGYYNNYQQQPNHSYSQPVGAYQNT 150


>ref|XP_002879791.1| SAC3/GANP family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325630|gb|EFH56050.1| SAC3/GANP family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1004

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
 Frame = -1

Query: 448 GGNTDTMPQLDLSSLQV---VDPTQGGSSAYSPLNPGVASTTGSKAVSWTLQWTDNRSTE 278
           GGNT  +  +D +S++    VD +Q    +Y         +TGS +  WT    +N++ E
Sbjct: 4   GGNTQAVAPMDPNSIENRYGVDGSQAHKYSYQ-------YSTGSDSAPWTAHSVENQAVE 56

Query: 277 NGVTPNSSYHHSQRAEPLARDVQDGPNAAPQAVASSSLGSSHGPQEHAXXXXXXXXXXXX 98
           NG   NS+Y+H Q   P   +VQ+ PN +    +SS+ G+++  Q+++            
Sbjct: 57  NGNYSNSNYYHPQPTGPATSNVQEIPNTS-SFTSSSTSGTANVAQDYSGYTPYQTSSDPH 115

Query: 97  XXXXXXXXXXXXXYQQQTSNMYPQQVGTYQNT 2
                        YQQQ S  YPQ VGTYQNT
Sbjct: 116 NYSNTGYSNYYSGYQQQPSQSYPQPVGTYQNT 147


>ref|XP_002525081.1| leukocyte receptor cluster (lrc) member, putative [Ricinus
           communis] gi|223535662|gb|EEF37328.1| leukocyte receptor
           cluster (lrc) member, putative [Ricinus communis]
          Length = 1058

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
 Frame = -1

Query: 448 GGNTDTMPQLDLSSLQV---VDPTQGGSSAYSPLNPGVASTTGSKAVSWTLQWTDNRSTE 278
           G N  T+  +D +SL+     D +Q   S+Y P      STTG +A SWT+   DN S E
Sbjct: 5   GVNMQTISSVDSNSLEARYTADASQPHDSSYFP------STTGPEAASWTMHRVDNHSAE 58

Query: 277 NGVTPNSSYHHSQRAEPLARDVQDGPNAAPQAVASSSLGSSHGPQEHAXXXXXXXXXXXX 98
           NG+  +S++ H Q AEP   +VQ G NA   A +SS+L S+   Q+++            
Sbjct: 59  NGIPSDSTFQHDQPAEPSTSNVQHGLNATSVA-SSSTLASASASQDYSSYASYSNATDPY 117

Query: 97  XXXXXXXXXXXXXYQQQTSNMYPQQ 23
                        YQQQ ++ Y QQ
Sbjct: 118 GYTSTGYPGYYNGYQQQLNHSYSQQ 142


>ref|XP_003536783.1| PREDICTED: uncharacterized protein LOC100778996 [Glycine max]
          Length = 999

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
 Frame = -1

Query: 448 GGNTDTMPQLD--LSSLQVVDPTQGGSSAYSPLNPGVASTTGSKAVSWTLQWTDNRSTEN 275
           G NT+T+P  +  L   + VD +Q   ++Y+P      +TTGS+A  WT+    + ST N
Sbjct: 5   GSNTETLPPAEPHLFENRHVDASQHHPTSYAP------TTTGSEAAPWTV----HSSTGN 54

Query: 274 GVTPNSSYHHSQRAEPLARDVQDGPNAAPQAVASSSLGSSHGPQEH-AXXXXXXXXXXXX 98
           GV  N +Y + Q  +P  R +QDG N +  A  SS+LG+++  Q++ A            
Sbjct: 55  GVYSNPTYLYDQHPQPPGRSIQDGQNVSSVAGNSSNLGTANVTQDYNAYASYPSSSNPYG 114

Query: 97  XXXXXXXXXXXXXYQQQTSNMYPQQVGTYQNT 2
                         QQQ ++ Y Q VG YQNT
Sbjct: 115 YGSMGFSGYYNNYQQQQPNHTYSQPVGAYQNT 146


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