BLASTX nr result

ID: Cimicifuga21_contig00023655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023655
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279901.1| PREDICTED: uncharacterized protein LOC100251...    79   5e-13
emb|CAN81170.1| hypothetical protein VITISV_022560 [Vitis vinifera]    79   5e-13
ref|XP_002512613.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_002325462.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
gb|AAS21015.1| unknown [Hyacinthus orientalis]                         69   3e-10

>ref|XP_002279901.1| PREDICTED: uncharacterized protein LOC100251233 [Vitis vinifera]
          Length = 513

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = -2

Query: 290 LRVGKKIVITGMVLSSAPFVLPPILVVSTIGFAFAVPFGLVFAGYACTEKVMSKLL 123
           L +GKK ++TG+V+SS PFVLPP++V S +G AF+VP GL  A YACTEK+MSKLL
Sbjct: 30  LMLGKKALLTGIVISSVPFVLPPLVVFSALGLAFSVPSGLAVATYACTEKIMSKLL 85


>emb|CAN81170.1| hypothetical protein VITISV_022560 [Vitis vinifera]
          Length = 532

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = -2

Query: 290 LRVGKKIVITGMVLSSAPFVLPPILVVSTIGFAFAVPFGLVFAGYACTEKVMSKLL 123
           L +GKK ++TG+V+SS PFVLPP++V S +G AF+VP GL  A YACTEK+MSKLL
Sbjct: 30  LMLGKKALLTGIVISSVPFVLPPLVVFSALGLAFSVPSGLAVATYACTEKIMSKLL 85


>ref|XP_002512613.1| conserved hypothetical protein [Ricinus communis]
           gi|223548574|gb|EEF50065.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 501

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/56 (58%), Positives = 47/56 (83%)
 Frame = -2

Query: 290 LRVGKKIVITGMVLSSAPFVLPPILVVSTIGFAFAVPFGLVFAGYACTEKVMSKLL 123
           L +GKKI++TG V+SSAPF+LPP++V+S +G A +VP+G+  A +ACTEK+ SKLL
Sbjct: 26  LALGKKILVTGFVISSAPFLLPPLVVISALGLACSVPYGIYLASHACTEKLTSKLL 81


>ref|XP_002325462.1| predicted protein [Populus trichocarpa] gi|222862337|gb|EEE99843.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = -2

Query: 290 LRVGKKIVITGMVLSSAPFVLPPILVVSTIGFAFAVPFGLVFAGYACTEKVMSKLL 123
           L VGK I++TG V+SSAP  L P +VVS IGFA +VP+GL  A YA TE++MSKLL
Sbjct: 34  LSVGKMILVTGFVISSAPVFLLPFVVVSAIGFACSVPYGLFLASYALTEQLMSKLL 89


>gb|AAS21015.1| unknown [Hyacinthus orientalis]
          Length = 223

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = -2

Query: 317 VGNSTKSLILRVGKKIVITGMVLSSAPFVLPPILVVSTIGFAFAVPFGLVFAGYACTEKV 138
           VG++  S    +G+K  I G  L+SAP V+PP+LV S +  AFAVPFG+ F G ACT+KV
Sbjct: 40  VGSTVLSRGWSIGRKAAIAGAALTSAPVVIPPLLVASFVIIAFAVPFGVFFTGVACTDKV 99

Query: 137 MSKLL 123
           M  LL
Sbjct: 100 MRSLL 104


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