BLASTX nr result

ID: Cimicifuga21_contig00023637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023637
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256...   337   1e-90
ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|2...   334   8e-90
dbj|BAK07723.1| predicted protein [Hordeum vulgare subsp. vulgare]    332   5e-89
ref|XP_002520749.1| conserved hypothetical protein [Ricinus comm...   331   8e-89
ref|XP_004167583.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   330   1e-88

>ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256371 [Vitis vinifera]
            gi|296086702|emb|CBI32337.3| unnamed protein product
            [Vitis vinifera]
          Length = 926

 Score =  337 bits (864), Expect = 1e-90
 Identities = 164/218 (75%), Positives = 192/218 (88%)
 Frame = +3

Query: 3    FNSGKSSVINALLGRRYLNEGVVPTTNEITLLCYSERDTNAQERCERHPDGQFICYLPAP 182
            FNSGKS+VINALLGRRYL EGVVPTTNEIT L YSE D++ ++RCERHPDGQ+ICYLPAP
Sbjct: 379  FNSGKSTVINALLGRRYLKEGVVPTTNEITFLRYSELDSDGKQRCERHPDGQYICYLPAP 438

Query: 183  ILKDMNLVDTPGTNVILQRQQRLTEEFVPRADLLLFVLSADRPLTESEVEFLRYIQQWKK 362
            ILK+MN+VDTPGTNVILQRQQRLTEEFVPRADLLLFV+SADRPLTESEV FLRY QQW+K
Sbjct: 439  ILKEMNIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPLTESEVAFLRYTQQWRK 498

Query: 363  KVVFILNKADLYQNNSELEEAVAFIKENAQKLLKTEHVTLYPVSARSAIKAKLNVYSVAG 542
            K+VF+LNKADLYQN SELEEAV+FIK+N QKLL  +HV LYPVSAR A++AKL+   + G
Sbjct: 499  KIVFVLNKADLYQNASELEEAVSFIKKNVQKLLNVKHVILYPVSARLALEAKLSASGI-G 557

Query: 543  KNHEELLLSDSFWRSSGFNDLENFLFSFLDGSTDTGME 656
            K++E  +   S W+++ F++ ENFL+SFLDGST TGME
Sbjct: 558  KDYEPSVADSSHWKATSFSEFENFLYSFLDGSTSTGME 595


>ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|222857029|gb|EEE94576.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score =  334 bits (857), Expect = 8e-90
 Identities = 166/218 (76%), Positives = 191/218 (87%)
 Frame = +3

Query: 3   FNSGKSSVINALLGRRYLNEGVVPTTNEITLLCYSERDTNAQERCERHPDGQFICYLPAP 182
           FNSGKS+VINALLG+RYLNEGVVPTTNEIT L YS+ D+  Q+RCERHPDGQ+ICYLPAP
Sbjct: 320 FNSGKSTVINALLGKRYLNEGVVPTTNEITFLRYSKSDSEEQQRCERHPDGQYICYLPAP 379

Query: 183 ILKDMNLVDTPGTNVILQRQQRLTEEFVPRADLLLFVLSADRPLTESEVEFLRYIQQWKK 362
           ILK+MN+VDTPGTNVILQRQQRLTEEFVPRADLLLFV+SADRPLTESEV FLRY QQWKK
Sbjct: 380 ILKEMNIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPLTESEVSFLRYTQQWKK 439

Query: 363 KVVFILNKADLYQNNSELEEAVAFIKENAQKLLKTEHVTLYPVSARSAIKAKLNVYSVAG 542
           KVVF+LNK+DLY+N+SELEEA+ FIKEN +KLLKT  V LYP+SARSA++AKL+  S  G
Sbjct: 440 KVVFVLNKSDLYRNSSELEEAMLFIKENTRKLLKTNDVILYPISARSALEAKLSASSDLG 499

Query: 543 KNHEELLLSDSFWRSSGFNDLENFLFSFLDGSTDTGME 656
           K++ EL +S S  + S F +LE FL+SFLD ST TGME
Sbjct: 500 KDYTELSVSKSHLKISRFYELEQFLYSFLDASTTTGME 537


>dbj|BAK07723.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 967

 Score =  332 bits (850), Expect = 5e-89
 Identities = 169/220 (76%), Positives = 192/220 (87%), Gaps = 2/220 (0%)
 Frame = +3

Query: 3    FNSGKSSVINALLGRRYLNEGVVPTTNEITLLCYSERDTNAQERCERHPDGQFICYLPAP 182
            FNSGKS+ INALLGR+YL EGVVPTTNEITLL YSE D+ + ERCERHPDGQF CYL AP
Sbjct: 418  FNSGKSTFINALLGRKYLEEGVVPTTNEITLLSYSEVDSESIERCERHPDGQFTCYLSAP 477

Query: 183  ILKDMNLVDTPGTNVILQRQQRLTEEFVPRADLLLFVLSADRPLTESEVEFLRYIQQWKK 362
            ILK+MNLVDTPGTNVILQRQQRLTEE+VPRADL+LFVLS+DRPLTESEV FL+Y+QQWKK
Sbjct: 478  ILKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLSSDRPLTESEVGFLQYVQQWKK 537

Query: 363  KVVFILNKADLYQNNSELEEAVAFIKENAQKLLKTEHVTLYPVSARSAIKAKLNVYSVAG 542
            KVVF+LNK DLY+NNSELEEA AFIKENA+KLL TE VTL+PVS+RSA++ KL+ YS   
Sbjct: 538  KVVFVLNKLDLYRNNSELEEATAFIKENARKLLNTEDVTLFPVSSRSALEVKLS-YSKNN 596

Query: 543  --KNHEELLLSDSFWRSSGFNDLENFLFSFLDGSTDTGME 656
              ++H E+LLSD  WRSS F DLE++L SFLDGSTD G E
Sbjct: 597  DREHHGEVLLSDPRWRSSKFYDLEHYLLSFLDGSTDNGKE 636


>ref|XP_002520749.1| conserved hypothetical protein [Ricinus communis]
            gi|223540134|gb|EEF41711.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 921

 Score =  331 bits (848), Expect = 8e-89
 Identities = 162/218 (74%), Positives = 190/218 (87%)
 Frame = +3

Query: 3    FNSGKSSVINALLGRRYLNEGVVPTTNEITLLCYSERDTNAQERCERHPDGQFICYLPAP 182
            FNSGKS+VINALLG RYL EGVVPTTNEIT L YS+ ++   +RCERHPDGQ++CYLPAP
Sbjct: 373  FNSGKSTVINALLGERYLKEGVVPTTNEITFLRYSQYNSEEPQRCERHPDGQYVCYLPAP 432

Query: 183  ILKDMNLVDTPGTNVILQRQQRLTEEFVPRADLLLFVLSADRPLTESEVEFLRYIQQWKK 362
            IL +MN+VDTPGTNVILQRQQRLTEEFVPRADLLLFV+SADRPLTESEV FLRY QQWKK
Sbjct: 433  ILNEMNIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPLTESEVAFLRYTQQWKK 492

Query: 363  KVVFILNKADLYQNNSELEEAVAFIKENAQKLLKTEHVTLYPVSARSAIKAKLNVYSVAG 542
            KVVF+LNK+DLYQN SELEEA +FIKEN +KLL TE V LYPVSARSA++AKL+  S + 
Sbjct: 493  KVVFVLNKSDLYQNASELEEAKSFIKENTRKLLNTESVILYPVSARSALEAKLSASSDSE 552

Query: 543  KNHEELLLSDSFWRSSGFNDLENFLFSFLDGSTDTGME 656
            +++ E L S+S W++S F++ E FL+SFLDGST+TGME
Sbjct: 553  RDYTESLNSESHWKTSSFDEFEKFLYSFLDGSTETGME 590


>ref|XP_004167583.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101213431 [Cucumis
            sativus]
          Length = 924

 Score =  330 bits (846), Expect = 1e-88
 Identities = 164/218 (75%), Positives = 189/218 (86%)
 Frame = +3

Query: 3    FNSGKSSVINALLGRRYLNEGVVPTTNEITLLCYSERDTNAQERCERHPDGQFICYLPAP 182
            FNSGKS+VINALLGRRYL +GVVPTTNEIT L +SE ++N Q+RCERHPDGQ+ICYLPAP
Sbjct: 379  FNSGKSTVINALLGRRYLKDGVVPTTNEITFLKFSELNSNEQQRCERHPDGQYICYLPAP 438

Query: 183  ILKDMNLVDTPGTNVILQRQQRLTEEFVPRADLLLFVLSADRPLTESEVEFLRYIQQWKK 362
            IL +MN+VDTPGTNVIL+RQQRLTEEFVPRADLLLFV+SADRPLTESEV FLRY QQWKK
Sbjct: 439  ILNEMNIVDTPGTNVILERQQRLTEEFVPRADLLLFVISADRPLTESEVNFLRYTQQWKK 498

Query: 363  KVVFILNKADLYQNNSELEEAVAFIKENAQKLLKTEHVTLYPVSARSAIKAKLNVYSVAG 542
            KVVF+LNK+DLYQN+ ELEEA++FIKENA KLL TEHV ++PVSARSA+  KL+    +G
Sbjct: 499  KVVFVLNKSDLYQNSDELEEALSFIKENAAKLLNTEHVFVFPVSARSALDEKLSATLESG 558

Query: 543  KNHEELLLSDSFWRSSGFNDLENFLFSFLDGSTDTGME 656
               E L  S S+WRSS F++LENFL+SFLDGST  G E
Sbjct: 559  ---EVLSPSSSYWRSSSFHELENFLYSFLDGSTSNGKE 593


Top