BLASTX nr result

ID: Cimicifuga21_contig00023631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023631
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   132   2e-37
ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [S...    77   1e-12
ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [S...    64   1e-08
ref|XP_003593389.1| hypothetical protein MTR_2g010910 [Medicago ...    44   1e-07
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               43   1e-07

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  132 bits (332), Expect(2) = 2e-37
 Identities = 62/69 (89%), Positives = 65/69 (94%)
 Frame = +2

Query: 2   RPIDHGTNRVGRPNHHTKRIDANPPRYRTCDSHRIRLAQRLLNPSRAFFSTYPLKSSIKL 181
           RPIDHGTNRVGRPNHHT RIDANPPRYRTCDSHRIRLAQRLLNPSRAF ST+PL+SSIKL
Sbjct: 6   RPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKL 65

Query: 182 AFPRRYEIG 208
           AF RR E+G
Sbjct: 66  AFSRRSEMG 74



 Score = 48.5 bits (114), Expect(2) = 2e-37
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +1

Query: 208 GVLPSPIVCIGLASSRTKEAFWRARACRNADY 303
           GV PSPIVCIGLASSR+K  + RARACR AD+
Sbjct: 74  GVFPSPIVCIGLASSRSK-LYLRARACRKADH 104


>ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [Sorghum bicolor]
           gi|241937305|gb|EES10450.1| hypothetical protein
           SORBIDRAFT_06g002025 [Sorghum bicolor]
          Length = 132

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = +2

Query: 2   RPIDHGTNRVGRPNHHTKRIDANPPRYRTCDSHRIRLAQR 121
           RPIDHGTNRV RPNHHT  IDANPP YRTCDSHRIRL  R
Sbjct: 9   RPIDHGTNRVSRPNHHTTCIDANPPPYRTCDSHRIRLTVR 48


>ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [Sorghum bicolor]
           gi|241944862|gb|EES18007.1| hypothetical protein
           SORBIDRAFT_09g014016 [Sorghum bicolor]
          Length = 100

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/48 (66%), Positives = 32/48 (66%)
 Frame = -3

Query: 145 KGSGWI*ESLCEPYXXXXXXXXXXXXXVYTFSVVVGPTHPICSMIYGS 2
           K SGWI ESLCEPY             VYT SVVVGPTHPICSMIYGS
Sbjct: 2   KSSGWIFESLCEPYAVRVARTVRRGVRVYTCSVVVGPTHPICSMIYGS 49


>ref|XP_003593389.1| hypothetical protein MTR_2g010910 [Medicago truncatula]
          gi|355482437|gb|AES63640.1| hypothetical protein
          MTR_2g010910 [Medicago truncatula]
          Length = 60

 Score = 43.5 bits (101), Expect(2) = 1e-07
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -3

Query: 61 YTFSVVVGPTHPICSMIYGS 2
          YTFSVV+GPTHPICSMIY S
Sbjct: 25 YTFSVVLGPTHPICSMIYAS 44



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 134 MDLGVFVRAVCGESRTYGNEG 72
           MDLGVFVR +CGESR  GN+G
Sbjct: 1   MDLGVFVREMCGESRRCGNKG 21


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 43.1 bits (100), Expect(3) = 1e-07
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -3

Query: 61 YTFSVVVGPTHPICSMIYGS 2
          YT+SV VGPTHPICSMIYGS
Sbjct: 34 YTYSVRVGPTHPICSMIYGS 53



 Score = 33.5 bits (75), Expect(3) = 1e-07
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -1

Query: 249 RSQADTYDRRRKHPP 205
           RSQADTYDRRRK PP
Sbjct: 8   RSQADTYDRRRKDPP 22



 Score = 23.1 bits (48), Expect(3) = 1e-07
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 209 PQFHSAWGTQV 177
           P FHS WGT V
Sbjct: 21  PPFHSTWGTGV 31


Top