BLASTX nr result

ID: Cimicifuga21_contig00023621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023621
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144925.1| PREDICTED: mechanosensitive ion channel prot...   112   2e-23
ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel prot...   112   4e-23
ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel prot...   112   4e-23
ref|XP_002521237.1| conserved hypothetical protein [Ricinus comm...   110   9e-23
ref|XP_002305537.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23

>ref|XP_004144925.1| PREDICTED: mechanosensitive ion channel protein 6-like [Cucumis
           sativus] gi|449529323|ref|XP_004171649.1| PREDICTED:
           mechanosensitive ion channel protein 6-like [Cucumis
           sativus]
          Length = 955

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/83 (69%), Positives = 64/83 (77%)
 Frame = -2

Query: 257 CLLVATLLWLVKTLFVKVLASSFHVSTYFDRIQESLFNQYVIEKLSGPPLXXXXXXXXXX 78
           CLL++TL+WLVKTL VKVLASSFHVSTYFDRIQESLFNQYVIE LSGPPL          
Sbjct: 457 CLLISTLIWLVKTLMVKVLASSFHVSTYFDRIQESLFNQYVIETLSGPPLVEIRKNEEEE 516

Query: 77  EKVMAEVQNLQKAGANMPADLKA 9
           E++  EVQ LQ AG  +P DLKA
Sbjct: 517 ERIADEVQKLQNAGIIIPPDLKA 539


>ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
           sativus]
          Length = 923

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/84 (69%), Positives = 65/84 (77%)
 Frame = -2

Query: 257 CLLVATLLWLVKTLFVKVLASSFHVSTYFDRIQESLFNQYVIEKLSGPPLXXXXXXXXXX 78
           CLLV+TL+WLVKTL VKVLASSFHVSTYFDRIQ++LFNQYVIE LSGPPL          
Sbjct: 430 CLLVSTLVWLVKTLMVKVLASSFHVSTYFDRIQDALFNQYVIETLSGPPLIEIQKNEEEE 489

Query: 77  EKVMAEVQNLQKAGANMPADLKAT 6
           E++  EV  LQ AGA +P DLKAT
Sbjct: 490 ERLAEEVIKLQNAGATIPPDLKAT 513


>ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
           sativus]
          Length = 923

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/84 (69%), Positives = 65/84 (77%)
 Frame = -2

Query: 257 CLLVATLLWLVKTLFVKVLASSFHVSTYFDRIQESLFNQYVIEKLSGPPLXXXXXXXXXX 78
           CLLV+TL+WLVKTL VKVLASSFHVSTYFDRIQ++LFNQYVIE LSGPPL          
Sbjct: 430 CLLVSTLVWLVKTLMVKVLASSFHVSTYFDRIQDALFNQYVIETLSGPPLIEIQKNEEEE 489

Query: 77  EKVMAEVQNLQKAGANMPADLKAT 6
           E++  EV  LQ AGA +P DLKAT
Sbjct: 490 ERLAEEVIKLQNAGATIPPDLKAT 513


>ref|XP_002521237.1| conserved hypothetical protein [Ricinus communis]
           gi|223539505|gb|EEF41093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 882

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = -2

Query: 257 CLLVATLLWLVKTLFVKVLASSFHVSTYFDRIQESLFNQYVIEKLSGPPLXXXXXXXXXX 78
           C LVA  +WL+KTL VKVLASSFHVSTYFDRIQES+FNQY+IE LSGPPL          
Sbjct: 426 CFLVANFVWLLKTLMVKVLASSFHVSTYFDRIQESIFNQYIIETLSGPPLIEIRRNEDEV 485

Query: 77  EKVMAEVQNLQKAGANMPADLKATM 3
           EK  AE++ LQ AG NMP +LKA +
Sbjct: 486 EKTAAEIRKLQNAGLNMPPELKAAV 510


>ref|XP_002305537.1| predicted protein [Populus trichocarpa] gi|222848501|gb|EEE86048.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/85 (64%), Positives = 64/85 (75%)
 Frame = -2

Query: 257 CLLVATLLWLVKTLFVKVLASSFHVSTYFDRIQESLFNQYVIEKLSGPPLXXXXXXXXXX 78
           C LV   +WL+KTL VKVLASSFHVSTYFDRIQESLFNQ+VIE LSGPPL          
Sbjct: 215 CFLVGNFIWLIKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIEIQKAEDDV 274

Query: 77  EKVMAEVQNLQKAGANMPADLKATM 3
           E++ AEV+ LQ AG  MPA+LKA++
Sbjct: 275 ERIAAEVRKLQNAGVTMPAELKASV 299


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