BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023619
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...    94   2e-17
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...    91   2e-16
ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               65   1e-08

>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
            gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
            putative [Ricinus communis]
          Length = 774

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 77/221 (34%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
 Frame = +1

Query: 52   PAVEESGTVPV-EDTCLATGGTVPVEDALATGATVSVVVANLEARGTV---PVENSHVKA 219
            PA+E    +P   D       TV + +++A  +  S      E+R T    P   +  + 
Sbjct: 479  PAIE---VIPEWRDATSPARSTVAILESIAATSPTSATEMISESRTTTSPAPATENIPEP 535

Query: 220  REANSPAPMPEFDMEIERLRFEEDQAYGSALPE-------FTSSPFRGDEFTPFPTSNID 378
              A    P  E D+EIERLR  E       LPE       F  SPFR D+FTP    ++ 
Sbjct: 536  MFAQPSVPEVEPDLEIERLRQHEGHDANILLPELLPSPGRFPPSPFRRDDFTPNSMKSLG 595

Query: 379  SXXXXXXXXXXXXXXXXXXXXXXXXXXX---MGTPMTLFEQQSGMDGTGLSDIPELRNSA 549
            S                              + TP T  E+Q     TGLSDIPE  N+A
Sbjct: 596  SETAHWAGTSAGTEVLPTPDIAASTGTYTTDLETPRTFLEEQFDAGHTGLSDIPEFVNTA 655

Query: 550  EEEDLCFLDADSTPAGY-SEKEVHALSVRTRAVAQYLKDQS 669
            E EDL FL+AD++PAG    + + +LSVRTRAVAQYLK  S
Sbjct: 656  EAEDLYFLEADNSPAGSPGSQGIDSLSVRTRAVAQYLKRNS 696


>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
            vinifera]
          Length = 761

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 69/167 (41%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
 Frame = +1

Query: 232  SPAPMPEFDMEIERLRFEEDQAYGSALPE--------------FTSSPFRGDEFTPFPTS 369
            SPAPMP+ D+EIERLR  E  A  + LPE              F SS  RGD FTP  T 
Sbjct: 529  SPAPMPDLDIEIERLRDHEGNAGSNILPEIMPSPTRLIYSPTRFPSSSIRGD-FTPISTG 587

Query: 370  NIDSXXXXXXXXXXXXXXXXXXXXXXXXXXX---MGTPMTLFEQQSGMDGTGLSDIPELR 540
            +  S                              + TP T  E Q G++ TGLSDIPEL 
Sbjct: 588  DKGSELDPMVGTDFGTRSLPTPDFSMSAGTFGSDLETPATFMEDQLGVENTGLSDIPELV 647

Query: 541  NSAEE--EDLCFLDADS-TPAGY-SEKEVHALSVRTRAVAQYLKDQS 669
            NSAE    +L FL+AD  TP G    ++V  LS+RTRAVAQYL++ S
Sbjct: 648  NSAEVSLSELNFLEADDMTPTGSPGTQDVSTLSIRTRAVAQYLQNHS 694


>ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|222846910|gb|EEE84457.1|
            predicted protein [Populus trichocarpa]
          Length = 818

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 58/157 (36%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
 Frame = +1

Query: 244  MPEFDMEIERLRFE---EDQAYGSALPE----------FTSSPFRGDEFTPFPTSNIDSX 384
            +PE DMEIERLR +   +   + S LP           F  S  R D+FTP P S+  S 
Sbjct: 589  LPEIDMEIERLRNDGGHDGNDFLSDLPSPAMSMPSPGRFMPSSLRRDDFTPMPISSFGSG 648

Query: 385  XXXXXXXXXXXXXXXXXXXXXXXXXXMGTPMTLFEQQSGMDGTGLSDIPELRNSAEEEDL 564
                                        +P T    Q G   TGLSDIPEL  +AE++DL
Sbjct: 649  TVPQEGTSTTVHTPEFS----------ASPGTY---QLGEQNTGLSDIPELMKTAEDDDL 695

Query: 565  C-FLDADSTPAG-YSEKEVHALSVRTRAVAQYLKDQS 669
               L+AD+TP G    +++ +LSVRTR VA+YLK+ S
Sbjct: 696  AKILEADNTPVGSLGTRDIDSLSVRTRGVAKYLKEHS 732


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
 Frame = +1

Query: 232 SPAPMPEFDMEIERLRFEEDQAYGSALPE--------------FTSSPFRGDEFTPFPTS 369
           SPAPMP+ D+EIERLR  E  A  + LPE              F SS  RGD FTP  T 
Sbjct: 505 SPAPMPDLDIEIERLRDHEGNAGSNILPEIMPSPTRLIYSPTRFPSSSIRGD-FTPISTG 563

Query: 370 NIDS---XXXXXXXXXXXXXXXXXXXXXXXXXXXMGTPMTLFEQQSGMDGTGLSDIPELR 540
           +  S                              + TP T  E Q G++ TGLSDIPEL 
Sbjct: 564 DKGSELDPMVGTDFGTRSLPTPDFSMSAGTFGSDLETPATFMEDQLGVENTGLSDIPELV 623

Query: 541 NSAE 552
           NSAE
Sbjct: 624 NSAE 627