BLASTX nr result

ID: Cimicifuga21_contig00023617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023617
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635220.1| PREDICTED: uncharacterized protein LOC100242...    68   3e-09
emb|CAN76871.1| hypothetical protein VITISV_038835 [Vitis vinifera]    68   3e-09
emb|CAN80078.1| hypothetical protein VITISV_029999 [Vitis vinifera]    45   6e-08
emb|CBI38579.3| unnamed protein product [Vitis vinifera]               45   6e-08
ref|XP_002879534.1| hypothetical protein ARALYDRAFT_902613 [Arab...    62   1e-07

>ref|XP_003635220.1| PREDICTED: uncharacterized protein LOC100242100 [Vitis vinifera]
          Length = 1109

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 54/148 (36%), Positives = 73/148 (49%), Gaps = 40/148 (27%)
 Frame = -1

Query: 599  INSGKQILATVPWVDVCDDFHY*VKL-----------------------ATSILASVIYK 489
            +N+GKQI+  VP V+V D+F Y V+L                       ATSI+AS  Y 
Sbjct: 644  VNTGKQIIGPVPGVEVGDEFQYRVELGIIGLHRPTQGGIDYRKHDGKILATSIVASGGYA 703

Query: 488  ISG*VENP---IKEGAKNNII-----------TIGNCVLKNNMDAKNHVKVIRELEEEIS 351
                ++N    I  G   N+I             GN  LKN++DAKN V+VIR  +E  +
Sbjct: 704  DD--LDNSDVLIYSGQGGNLIGGDKQPEDQKLERGNLALKNSIDAKNLVRVIRGFKETKA 761

Query: 350  ---VDAEIYMVATLSYDGLYLVENYWKE 276
               +D+   +V T  YDGLYLVE YW+E
Sbjct: 762  PEYMDSRAKVVTTYIYDGLYLVEKYWQE 789


>emb|CAN76871.1| hypothetical protein VITISV_038835 [Vitis vinifera]
          Length = 1126

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 54/148 (36%), Positives = 73/148 (49%), Gaps = 40/148 (27%)
 Frame = -1

Query: 599  INSGKQILATVPWVDVCDDFHY*VKL-----------------------ATSILASVIYK 489
            +N+GKQI+  VP V+V D+F Y V+L                       ATSI+AS  Y 
Sbjct: 661  VNTGKQIIGPVPGVEVGDEFQYRVELGIIGLHRPTQGGIDYRKHXGKILATSIVASGGYA 720

Query: 488  ISG*VENP---IKEGAKNNII-----------TIGNCVLKNNMDAKNHVKVIRELEEEIS 351
                ++N    I  G   N+I             GN  LKN++DAKN V+VIR  +E  +
Sbjct: 721  DD--LDNSDVLIYSGQGGNLIGGDKQPEDQKLERGNLALKNSIDAKNLVRVIRGFKETKA 778

Query: 350  ---VDAEIYMVATLSYDGLYLVENYWKE 276
               +D+   +V T  YDGLYLVE YW+E
Sbjct: 779  PEYMDSRAKVVTTYIYDGLYLVEKYWQE 806


>emb|CAN80078.1| hypothetical protein VITISV_029999 [Vitis vinifera]
          Length = 959

 Score = 45.1 bits (105), Expect(3) = 6e-08
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = -1

Query: 506 ASVIYKISG*VENPI--KEGAKNNIITIGNCVLKNNMDAKNHVKVIRELEEEISVDAEIY 333
           +S I   SG   NP+   + A++  +  GN  LKN+MDAK  V+V R  +    V ++ Y
Sbjct: 479 SSDILIYSGQGGNPMVGHKQAEDQKLERGNLALKNSMDAKTPVRVTRGFQAT-KVTSQGY 537

Query: 332 MVATLSYDGLYLVENYWKETWCLRTRVF 249
                +YDGLY V+ YW+E     T +F
Sbjct: 538 -----TYDGLYFVDKYWQEIGQFGTLIF 560



 Score = 35.8 bits (81), Expect(3) = 6e-08
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -3

Query: 117 PIGVFNIIDDEKPPPYEYVTNLIY 46
           PI V N IDDEKP P+ Y+  ++Y
Sbjct: 626 PIRVVNTIDDEKPQPFSYIARMVY 649



 Score = 21.6 bits (44), Expect(3) = 6e-08
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -2

Query: 256 ESLCSKENFGVTKTCYIRIEEIDESN*QR*VRAFG*MNDISRGKED 119
           ES  SK  + +T     R  E+++    + VR    +NDIS+GKE+
Sbjct: 580 ESKKSKVRWKITFNDISRGRELNKPKKSK-VRMKTILNDISQGKEE 624


>emb|CBI38579.3| unnamed protein product [Vitis vinifera]
          Length = 556

 Score = 45.1 bits (105), Expect(3) = 6e-08
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = -1

Query: 506 ASVIYKISG*VENPI--KEGAKNNIITIGNCVLKNNMDAKNHVKVIRELEEEISVDAEIY 333
           +S I   SG   NP+   + A++  +  GN  LKN+MDAK  V+V R  +    V ++ Y
Sbjct: 166 SSDILIYSGQGGNPMVGHKQAEDQKLERGNLALKNSMDAKTPVRVTRGFQAT-KVTSQGY 224

Query: 332 MVATLSYDGLYLVENYWKETWCLRTRVF 249
                +YDGLY V+ YW+E     T +F
Sbjct: 225 -----TYDGLYFVDKYWQEIGQFGTLIF 247



 Score = 35.8 bits (81), Expect(3) = 6e-08
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -3

Query: 117 PIGVFNIIDDEKPPPYEYVTNLIY 46
           PI V N IDDEKP P+ Y+  ++Y
Sbjct: 313 PIRVVNTIDDEKPQPFSYIARMVY 336



 Score = 21.6 bits (44), Expect(3) = 6e-08
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -2

Query: 256 ESLCSKENFGVTKTCYIRIEEIDESN*QR*VRAFG*MNDISRGKED 119
           ES  SK  + +T     R  E+++    + VR    +NDIS+GKE+
Sbjct: 267 ESKKSKVRWKITFNDISRGRELNKPKKSK-VRMKTILNDISQGKEE 311


>ref|XP_002879534.1| hypothetical protein ARALYDRAFT_902613 [Arabidopsis lyrata subsp.
           lyrata] gi|297325373|gb|EFH55793.1| hypothetical protein
           ARALYDRAFT_902613 [Arabidopsis lyrata subsp. lyrata]
          Length = 802

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 42/152 (27%)
 Frame = -1

Query: 602 SINSGKQILATVPWVDVCDDFHY*VKL------------------------ATSILASVI 495
           ++NSG QI+ TVP V+V D+F Y +++                        ATSI++S  
Sbjct: 362 NLNSGTQIIGTVPGVEVGDEFQYRMEMNFLGIHRPSQSGIDYMKDDGEELVATSIVSSGG 421

Query: 494 YK----------ISG*VENPIKEGAKNN-----IITIGNCVLKNNMDAKNHVKVIRELEE 360
           Y            +G   N  K+G KNN      +  GN  LKN++  KN V+VIR ++ 
Sbjct: 422 YDDVVDNSDVLIYTGQGGNVGKKGKKNNEPKDQQLVTGNLALKNSIHKKNPVRVIRGIKN 481

Query: 359 ---EISVDAEIYMVATLSYDGLYLVENYWKET 273
              + S  A+ Y+     YDGLYLVE YW ET
Sbjct: 482 TTLQSSAVAKNYV-----YDGLYLVEEYWDET 508


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