BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023615
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isof...   247   6e-64
gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays] g...   247   6e-64
ref|XP_003574558.1| PREDICTED: splicing factor 3B subunit 1 isof...   247   6e-64
ref|XP_003557702.1| PREDICTED: splicing factor 3B subunit 1-like...   247   6e-64
ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like...   247   6e-64

>gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isoform 1 [Zea mays]
           gi|413935578|gb|AFW70129.1| antigenic determinant of
           rec-A protein, mRNA isoform 2 [Zea mays]
           gi|413935579|gb|AFW70130.1| antigenic determinant of
           rec-A protein, mRNA isoform 3 [Zea mays]
           gi|413935580|gb|AFW70131.1| antigenic determinant of
           rec-A protein, mRNA isoform 4 [Zea mays]
          Length = 1280

 Score =  247 bits (631), Expect = 6e-64
 Identities = 124/156 (79%), Positives = 139/156 (89%)
 Frame = +2

Query: 50  RMVMKLLLRFKNGTPPQRKIALRQLTNKARVFGSGPLVNCILPLLKKQTLEDQERHLLVK 229
           R +MKLLL+ KNGTPPQRK ALRQLT+KAR FG+GPL N ILPLL + TLEDQERHLLVK
Sbjct: 470 RKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVK 529

Query: 230 VIGRMIYKLDELVRPFVHKILTVIEPLLLDKDYYARIEGREIISNLSKTAGLLTMITVMR 409
           VI R++YKLDELVRPFVHKIL VIEPLL+D+DYYAR+EGREIISNLSK AGL TMI  MR
Sbjct: 530 VIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMR 589

Query: 410 PNVDDIDEYVRNVTSKALGVVASALGIPALLPFLKA 517
           P++D+IDEYVRN T++A  VVASALGIPALLPFLKA
Sbjct: 590 PDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKA 625


>gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
           gi|413926603|gb|AFW66535.1| hypothetical protein
           ZEAMMB73_641784 [Zea mays]
          Length = 1280

 Score =  247 bits (631), Expect = 6e-64
 Identities = 124/156 (79%), Positives = 139/156 (89%)
 Frame = +2

Query: 50  RMVMKLLLRFKNGTPPQRKIALRQLTNKARVFGSGPLVNCILPLLKKQTLEDQERHLLVK 229
           R +MKLLL+ KNGTPPQRK ALRQLT+KAR FG+GPL N ILPLL + TLEDQERHLLVK
Sbjct: 470 RKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVK 529

Query: 230 VIGRMIYKLDELVRPFVHKILTVIEPLLLDKDYYARIEGREIISNLSKTAGLLTMITVMR 409
           VI R++YKLDELVRPFVHKIL VIEPLL+D+DYYAR+EGREIISNLSK AGL TMI  MR
Sbjct: 530 VIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMR 589

Query: 410 PNVDDIDEYVRNVTSKALGVVASALGIPALLPFLKA 517
           P++D+IDEYVRN T++A  VVASALGIPALLPFLKA
Sbjct: 590 PDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKA 625


>ref|XP_003574558.1| PREDICTED: splicing factor 3B subunit 1 isoform 1 [Brachypodium
           distachyon] gi|357147949|ref|XP_003574559.1| PREDICTED:
           splicing factor 3B subunit 1 isoform 2 [Brachypodium
           distachyon] gi|357147951|ref|XP_003574560.1| PREDICTED:
           splicing factor 3B subunit 1 isoform 3 [Brachypodium
           distachyon]
          Length = 1279

 Score =  247 bits (631), Expect = 6e-64
 Identities = 124/156 (79%), Positives = 139/156 (89%)
 Frame = +2

Query: 50  RMVMKLLLRFKNGTPPQRKIALRQLTNKARVFGSGPLVNCILPLLKKQTLEDQERHLLVK 229
           R +MKLLL+ KNGTPPQRK ALRQLT+KAR FG+GPL N ILPLL + TLEDQERHLLVK
Sbjct: 469 RKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVK 528

Query: 230 VIGRMIYKLDELVRPFVHKILTVIEPLLLDKDYYARIEGREIISNLSKTAGLLTMITVMR 409
           VI R++YKLDELVRPFVHKIL VIEPLL+D+DYYAR+EGREIISNLSK AGL TMI  MR
Sbjct: 529 VIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMR 588

Query: 410 PNVDDIDEYVRNVTSKALGVVASALGIPALLPFLKA 517
           P++D+IDEYVRN T++A  VVASALGIPALLPFLKA
Sbjct: 589 PDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKA 624


>ref|XP_003557702.1| PREDICTED: splicing factor 3B subunit 1-like isoform 1
           [Brachypodium distachyon]
           gi|357111810|ref|XP_003557703.1| PREDICTED: splicing
           factor 3B subunit 1-like isoform 2 [Brachypodium
           distachyon] gi|357111812|ref|XP_003557704.1| PREDICTED:
           splicing factor 3B subunit 1-like isoform 3
           [Brachypodium distachyon]
          Length = 1276

 Score =  247 bits (631), Expect = 6e-64
 Identities = 124/156 (79%), Positives = 139/156 (89%)
 Frame = +2

Query: 50  RMVMKLLLRFKNGTPPQRKIALRQLTNKARVFGSGPLVNCILPLLKKQTLEDQERHLLVK 229
           R +MKLLL+ KNGTPPQRK ALRQLT+KAR FG+GPL N ILPLL + TLEDQERHLLVK
Sbjct: 466 RKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVK 525

Query: 230 VIGRMIYKLDELVRPFVHKILTVIEPLLLDKDYYARIEGREIISNLSKTAGLLTMITVMR 409
           VI R++YKLDELVRPFVHKIL VIEPLL+D+DYYAR+EGREIISNLSK AGL TMI  MR
Sbjct: 526 VIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMR 585

Query: 410 PNVDDIDEYVRNVTSKALGVVASALGIPALLPFLKA 517
           P++D+IDEYVRN T++A  VVASALGIPALLPFLKA
Sbjct: 586 PDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKA 621


>ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max]
          Length = 1172

 Score =  247 bits (631), Expect = 6e-64
 Identities = 124/156 (79%), Positives = 139/156 (89%)
 Frame = +2

Query: 50  RMVMKLLLRFKNGTPPQRKIALRQLTNKARVFGSGPLVNCILPLLKKQTLEDQERHLLVK 229
           R +MKLLL+ KNGTPPQRK ALRQLT+KAR FG+GPL N ILPLL + TLEDQERHLLVK
Sbjct: 362 RKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVK 421

Query: 230 VIGRMIYKLDELVRPFVHKILTVIEPLLLDKDYYARIEGREIISNLSKTAGLLTMITVMR 409
           VI R++YKLDELVRPFVHKIL VIEPLL+D+DYYAR+EGREIISNLSK AGL TMI  MR
Sbjct: 422 VIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMR 481

Query: 410 PNVDDIDEYVRNVTSKALGVVASALGIPALLPFLKA 517
           P++D+IDEYVRN T++A  VVASALGIPALLPFLKA
Sbjct: 482 PDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKA 517