BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023614
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...   374   e-101
ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase ac...   363   6e-98
ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase ac...   361   2e-97
ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [M...   358   2e-96
ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96

>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1 [Vitis
            vinifera] gi|297743001|emb|CBI35868.3| unnamed protein
            product [Vitis vinifera]
          Length = 391

 Score =  374 bits (961), Expect = e-101
 Identities = 198/385 (51%), Positives = 269/385 (69%), Gaps = 28/385 (7%)
 Frame = -2

Query: 1190 DNRTVALLAQL----DGVVAGLALAYIAIKTWSKFKCNSSALDKIRRAKTVPISDLRSLI 1023
            D    A+LAQ+    DG + GLALAY+A++++ +    SSAL +I ++ +  +SDLRSL+
Sbjct: 5    DQAAAAILAQVALAADGAILGLALAYVAVRSFIRLSSTSSALRQIDQSPSFRVSDLRSLL 64

Query: 1022 SSCANES--ETEPSDEKLVVVRGLVEAMPG------SSRPNVLLCHNSGDRGVALQETHN 867
            S  +++   ++  SD  LVVVRG VEA         S RPNVL+ H SG++GV LQ T  
Sbjct: 65   SPSSDDESDQSTSSDGLLVVVRGTVEAKSAIDGNWKSLRPNVLVSHESGEKGVILQRTQT 124

Query: 866  YILFNEWKRFSFHVRAV--LLGKSWRCVKSSSLRTVPFILVGSAREPLSDYVIVNLDGST 693
             I +NEW+ F      +  L  +SW+  +S+SLRTVPFILV   R P SDYVIVN+DGS 
Sbjct: 125  CI-YNEWRGFFGWTSDIRTLFARSWKEKESTSLRTVPFILVEGGRWPQSDYVIVNMDGSR 183

Query: 692  HPLPLSTVYHQ-SPYHTTP--FLRAIFGYEYPVGLI-EEKILPLGKEISAVGICSSQDGN 525
            HPLPL+TVYHQ  P + +P  FL+A+FG++YPVGL+ EEK+LPLGKEI+AVGICS ++G 
Sbjct: 184  HPLPLTTVYHQLQPVNASPYTFLQALFGHDYPVGLLDEEKLLPLGKEITAVGICSLKNGI 243

Query: 524  PQMKACEELPYFLSDMTKDEMVENLSYKANILFWSVIILGPLSVGILGYALTRNWVHWKE 345
            P++K+C++LPYFLS+M+KD+MV +L +K+ +LFWS +ILG +S+G+LGYA+ RNW  WKE
Sbjct: 244  PEIKSCKDLPYFLSEMSKDQMVVDLVFKSKVLFWSGVILGSVSIGVLGYAVVRNWNRWKE 303

Query: 344  WRQKR------QAQQSRNDADDVDDCTRGIPDGELCIICLARKRRFAFVPCGHLVCCHRC 183
            WRQ+R      QA     D    +D    +PDGELC+ICL R++R AFVPCGHLVCC RC
Sbjct: 304  WRQQRGVRPPSQAVTDDTDTQIAEDDAGDVPDGELCVICLMRRKRSAFVPCGHLVCCQRC 363

Query: 182  VTSAK----TMCPICRREIRTSVRV 120
              S +      CP+CR+ IR+SVR+
Sbjct: 364  ALSVERELSPKCPVCRQIIRSSVRI 388


>ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            [Glycine max]
          Length = 388

 Score =  363 bits (931), Expect = 6e-98
 Identities = 192/379 (50%), Positives = 262/379 (69%), Gaps = 26/379 (6%)
 Frame = -2

Query: 1178 VALLAQL----DGVVAGLALAYIAIKTWSKFKCNSSALDKIRRAKTVPISDLRSLISSCA 1011
            V+LL+QL    DG V GLALAY A++T  KF   S+AL K+ RA +V +SDLRSL++   
Sbjct: 9    VSLLSQLALSFDGAVLGLALAYAAVRTLFKFTATSAALRKLHRAPSVSVSDLRSLLAEIP 68

Query: 1010 NESETEPSDEKLVVVRGLVEA---MPGSS----RPNVLLCHNSGDRGVALQETHNYILFN 852
            ++++       +V+VRG V+A   + G +    RP VL+   SGD+ V LQ T   I +N
Sbjct: 69   SDADGNSDGGNIVIVRGTVDAKSTVEGGTWKTLRPGVLVSRESGDKSVILQRTQTCI-YN 127

Query: 851  EWKR---FSFHVRAVLLGKSWRCVKSSSLRTVPFILVGSAREPLSDYVIVNLDGSTHPLP 681
            EWK    ++  +RA+   +SWR  +S+SLR VPF+L+   R P ++YV+VN+DGS HPLP
Sbjct: 128  EWKGLFGWTSDLRAIF-ARSWRQQESTSLRKVPFVLIDVGRWPNAEYVVVNMDGSRHPLP 186

Query: 680  LSTVYHQ-SPYHTTP--FLRAIFGYEYPVGLI-EEKILPLGKEISAVGICSSQDGNPQMK 513
            LSTVYH+  P   +P  FL+A+FG+EYPVGL+ EEKILPLGK I+AVG+CS ++G  ++K
Sbjct: 187  LSTVYHKLQPITASPYTFLQALFGHEYPVGLLDEEKILPLGKNITAVGLCSLKNGIAEIK 246

Query: 512  ACEELPYFLSDMTKDEMVENLSYKANILFWSVIILGPLSVGILGYALTRNWVHWKEWRQK 333
            +C++LPYFLSD++KD+M+ +LS K  ILFW  I LG +SVG+LGYA+ RNW  WK+W+Q+
Sbjct: 247  SCKDLPYFLSDLSKDQMIVDLSSKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWKQQ 306

Query: 332  RQAQQSRNDADDV----DDCTRGIPDGELCIICLARKRRFAFVPCGHLVCCHRCVTSAK- 168
            RQ QQ R    DV    DD    +PDG+LC+ICL R+RR  F+PCGHLVCC  C  S + 
Sbjct: 307  RQLQQQRQAVSDVEPQMDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVER 366

Query: 167  ---TMCPICRREIRTSVRV 120
                 CP+CR+EIR SVR+
Sbjct: 367  EVAPKCPVCRQEIRDSVRI 385


>ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            [Glycine max]
          Length = 387

 Score =  361 bits (927), Expect = 2e-97
 Identities = 191/378 (50%), Positives = 258/378 (68%), Gaps = 25/378 (6%)
 Frame = -2

Query: 1178 VALLAQL----DGVVAGLALAYIAIKTWSKFKCNSSALDKIRRAKTVPISDLRSLISSCA 1011
            V+LL+QL    DG V G ALAY A++T  KF   SSAL K+RRA ++ +SDLRSL++   
Sbjct: 9    VSLLSQLALSLDGAVLGFALAYAAVRTLFKFTATSSALRKLRRAPSLSVSDLRSLLAEIP 68

Query: 1010 NESETEPSDEKLVVVRGLVEAMPG------SSRPNVLLCHNSGDRGVALQETHNYILFNE 849
            ++ +       +V+VRG V+A         + RP VL+   SGD+GV LQ T   I +NE
Sbjct: 69   SDGDGNSKGGIIVIVRGTVDAKSAVDGTWKTLRPGVLVSRESGDKGVILQRTQTCI-YNE 127

Query: 848  WKR---FSFHVRAVLLGKSWRCVKSSSLRTVPFILVGSAREPLSDYVIVNLDGSTHPLPL 678
            WK    ++  +RA+   +SWR  +S+SLR VPF+L    R P ++YV+VN+DGS HPLPL
Sbjct: 128  WKGLFGWTSDLRAIF-ARSWRQQESTSLRKVPFLLTDVGRRPNAEYVVVNMDGSRHPLPL 186

Query: 677  STVYHQ-SPYHTTP--FLRAIFGYEYPVGLI-EEKILPLGKEISAVGICSSQDGNPQMKA 510
            +TVYH+  P   +P  FL+A+FG+EYPVGL+ EEKILPLGK+I+AVG+CS ++G  ++K+
Sbjct: 187  TTVYHKLQPITASPYTFLQALFGHEYPVGLLDEEKILPLGKDITAVGLCSLKNGIAEIKS 246

Query: 509  CEELPYFLSDMTKDEMVENLSYKANILFWSVIILGPLSVGILGYALTRNWVHWKEWRQKR 330
            C+ LPYFLSD++KD+M+ +LS K  ILFW  I LG +SVG+LGYA+ RNW  WK+W+Q+R
Sbjct: 247  CKYLPYFLSDLSKDQMIMDLSIKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWKQQR 306

Query: 329  QAQQSRNDADDV----DDCTRGIPDGELCIICLARKRRFAFVPCGHLVCCHRCVTSAK-- 168
            Q QQ R    DV    DD     PDG+LC+ICL R+RR  F+PCGHLVCC  C  S +  
Sbjct: 307  QLQQQRQAVSDVEPQMDDEIEDAPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVERE 366

Query: 167  --TMCPICRREIRTSVRV 120
                CP+CR+EIR SVR+
Sbjct: 367  VAPKCPVCRQEIRDSVRI 384


>ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [Medicago truncatula]
            gi|66947626|emb|CAJ00009.1| C3HC4 zinc finger containing
            protein [Medicago truncatula] gi|355521317|gb|AET01771.1|
            Baculoviral IAP repeat-containing protein [Medicago
            truncatula]
          Length = 383

 Score =  358 bits (918), Expect = 2e-96
 Identities = 188/384 (48%), Positives = 267/384 (69%), Gaps = 25/384 (6%)
 Frame = -2

Query: 1196 SSDNRTVALLAQL----DGVVAGLALAYIAIKTWSKFKCNSSALDKIRRAKTVPISDLRS 1029
            S +   V+LL+QL    DG V G A+AY+A+++  KF   S+AL KI  A +V +SDLRS
Sbjct: 3    SQEQALVSLLSQLALSFDGAVLGFAVAYVAVRSIRKFTLTSAALRKITAAPSVSVSDLRS 62

Query: 1028 LISSCANESETEPSDEKLVVVRGLVEA---MPGSSR---PNVLLCHNSGDRGVALQETHN 867
            L++    E++    + K+V+VRG V+A   + GS +   P VL+   SGD+GV LQ T  
Sbjct: 63   LLT----ETDENSDEGKIVIVRGTVDAKNVVDGSWKALWPGVLVSSESGDKGVVLQRTQT 118

Query: 866  YILFNEWKR---FSFHVRAVLLGKSWRCVKSSSLRTVPFILVGSAREPLSDYVIVNLDGS 696
             I +NEWK    ++  +RA+ L +SWR  +S+SLR +PF+L+   R    +YV+VN+DGS
Sbjct: 119  CI-YNEWKGLFGWTSDLRALFL-RSWRQQESTSLRKIPFVLIDVGRPSNPEYVVVNMDGS 176

Query: 695  THPLPLSTVYHQ-SPYHTTP--FLRAIFGYEYPVGLI-EEKILPLGKEISAVGICSSQDG 528
            +HPLPL+TVYH+  P +  P  FL+A+FG+EYPVGL+ EEKILPLGK++SAVG+CS ++G
Sbjct: 177  SHPLPLTTVYHRLQPVNPPPYTFLQALFGHEYPVGLLDEEKILPLGKDVSAVGLCSLRNG 236

Query: 527  NPQMKACEELPYFLSDMTKDEMVENLSYKANILFWSVIILGPLSVGILGYALTRNWVHWK 348
              ++KAC +LPY+LSD++KD+M+ +LS+K  +LFWS I+LG +SVGI+GYA+ RNW  WK
Sbjct: 237  IAEIKACNDLPYYLSDLSKDQMIVDLSFKTKLLFWSGILLGSMSVGIIGYAVVRNWNKWK 296

Query: 347  EWRQKRQAQQSRND----ADDVDDCTRGIPDGELCIICLARKRRFAFVPCGHLVCCHRCV 180
            +W+Q+RQ QQ R          DD    +PDG+LC+ICL R+RR  F+PCGHLVCC  C 
Sbjct: 297  QWKQQRQLQQRRQQPIEPVPPTDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCA 356

Query: 179  TSAKT----MCPICRREIRTSVRV 120
             S ++     CP+CR+E+R SVR+
Sbjct: 357  ISVESEVAPKCPVCRQEVRDSVRI 380


>ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|222840675|gb|EEE78222.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  357 bits (916), Expect = 3e-96
 Identities = 189/376 (50%), Positives = 261/376 (69%), Gaps = 25/376 (6%)
 Frame = -2

Query: 1172 LLAQLDGVVAGLALAYIAIKTWSKFKCNSSALDKIRRAKTVPISDLRSLISSCANESETE 993
            L    DG + G ALAY A++++  F  NS +L KIR+A T+ +SDLRSL+ +  ++ + +
Sbjct: 17   LALSFDGAILGAALAYAAVRSFLNFTANSKSLAKIRKAPTLSVSDLRSLLQN--HDQDHQ 74

Query: 992  PSDEKLVVVRGLVEA---MPGSSRP-----NVLLCHNSGDRGVALQETHNYILFNEWKRF 837
              ++KLV+VRG VEA   + GS +      NVLL H SGD+ V LQ T   I +NEWK F
Sbjct: 75   DQEQKLVIVRGQVEAKSAVDGSGKKSSRDSNVLLSHESGDKAVILQRTQTCI-YNEWKGF 133

Query: 836  ---SFHVRAVLLGKSWRCVKSSSLRTVPFILVGSAREPLSDYVIVNLDGSTHPLPLSTVY 666
               +  +R++  G+S +  +++ LRTVPF LV   + P SDYVIVN+DGS+HPLPL+ VY
Sbjct: 134  FGWTSDLRSIF-GRSLKEQETTFLRTVPFTLVEGGQWPQSDYVIVNMDGSSHPLPLTMVY 192

Query: 665  HQ-SPYHTT--PFLRAIFGYEYPVGLI-EEKILPLGKEISAVGICSSQDGNPQMKACEEL 498
            HQ  P   +   F++A+FG+EYPVG++ EEKILPLGK ISAVGIC+S+DG P++K+C+EL
Sbjct: 193  HQLQPIVASRYTFIQALFGHEYPVGVLHEEKILPLGKCISAVGICNSKDGIPEIKSCKEL 252

Query: 497  PYFLSDMTKDEMVENLSYKANILFWSVIILGPLSVGILGYALTRNWVHWKEWRQKRQAQ- 321
            PYFL+DMTKDEMV +L++KA IL WS I+LG LS+G+LG+A+ RNW  WK WRQ+R  Q 
Sbjct: 253  PYFLADMTKDEMVADLAFKAKILLWSGIVLGSLSIGVLGFAVMRNWNKWKAWRQRRSQQP 312

Query: 320  ---QSRNDADDVDD--CTRGIPDGELCIICLARKRRFAFVPCGHLVCCHRCVTSAKT--- 165
                S  D   +DD      +P+G+LC+ICL R+RR AF+PCGHL CCH C  S ++   
Sbjct: 313  IHTTSDEDVSQIDDNEDAGDVPEGQLCVICLMRRRRAAFIPCGHLACCHTCAVSVESEVS 372

Query: 164  -MCPICRREIRTSVRV 120
              CP+CR+ +R S+R+
Sbjct: 373  PKCPLCRQAVRNSIRI 388