BLASTX nr result

ID: Cimicifuga21_contig00023586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023586
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...    69   1e-09
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]    69   1e-09
emb|CBI37538.3| unnamed protein product [Vitis vinifera]               67   4e-09
gb|AFW61460.1| hypothetical protein ZEAMMB73_267019 [Zea mays]         66   6e-09
ref|XP_004165770.1| PREDICTED: uncharacterized LOC101217143, par...    66   8e-09

>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
 Frame = +1

Query: 4   ESALQEGVTV---EAQYNKPMEKEIEMVNSASHSCIGSSKSYSESLKRLYRSMNVPVPRP 174
           E++L++ + V   E    K +EKE E+   AS + I  S+ ++ESL+ LYRSMNV VP+P
Sbjct: 473 ENSLEKKIEVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQP 532

Query: 175 LPSLVKLMKSTKRAKR 222
           LPSLV+LM S KRAK+
Sbjct: 533 LPSLVELMNSNKRAKK 548


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
 Frame = +1

Query: 4    ESALQEGVTV---EAQYNKPMEKEIEMVNSASHSCIGSSKSYSESLKRLYRSMNVPVPRP 174
            E++L++ + V   E    K +EKE E+   AS + I  S+ ++ESL+ LYRSMNV VP+P
Sbjct: 987  ENSLEKKIEVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQP 1046

Query: 175  LPSLVKLMKSTKRAKR 222
            LPSLV+LM S KRAK+
Sbjct: 1047 LPSLVELMNSNKRAKK 1062


>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = +1

Query: 34  EAQYNKPMEKEIEMVNSASHSCIGSSKSYSESLKRLYRSMNVPVPRPLPSLVKLMKSTKR 213
           E    K +EKE E+   AS + I  S+ ++ESL+ LYRSMNV VP+PLPSLV+LM S KR
Sbjct: 461 EVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPSLVELMNSNKR 520

Query: 214 AKR 222
           AK+
Sbjct: 521 AKK 523


>gb|AFW61460.1| hypothetical protein ZEAMMB73_267019 [Zea mays]
          Length = 653

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = +1

Query: 13  LQEGVTVEAQYNKPMEKEIEMVNSASHSCIGSSKSYSESLKRLYRSMNVPVPRPLPSLVK 192
           L++G T      +  + +     S S + +GSSK  + SL+RLYRSMNVPVPRPLPSLV+
Sbjct: 578 LEDGTTATPGTGRSTDHQYSERASDSSTVVGSSKGLNASLRRLYRSMNVPVPRPLPSLVQ 637

Query: 193 LMKSTKRAKRS 225
           LM ++KR + S
Sbjct: 638 LMAASKRPRVS 648


>ref|XP_004165770.1| PREDICTED: uncharacterized LOC101217143, partial [Cucumis sativus]
          Length = 540

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = +1

Query: 100 IGSSKSYSESLKRLYRSMNVPVPRPLPSLVKLMKSTKRAKRSSQF 234
           +GSSK +++  ++LYRSMNVPVP PLPSLV+LMKS KR KR+  F
Sbjct: 496 VGSSKGFNDKFRKLYRSMNVPVPEPLPSLVELMKSRKRVKRNGYF 540


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