BLASTX nr result

ID: Cimicifuga21_contig00023572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023572
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]      174   3e-41
emb|CBI22103.3| unnamed protein product [Vitis vinifera]              171   4e-40
dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]    142   1e-31
ref|XP_002454862.1| hypothetical protein SORBIDRAFT_03g000260 [S...   141   3e-31

>ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|222842601|gb|EEE80148.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  177 bits (450), Expect = 3e-42
 Identities = 105/244 (43%), Positives = 145/244 (59%), Gaps = 16/244 (6%)
 Frame = -3

Query: 1018 QTTPAESLTFDGIAKHFNMPIADAANLLGVCSSVLKKICRDNGLVRWPYRKFLAGKSVEE 839
            Q   ++  +++ I+KHF++P++DAAN LGVC SVLKKICRDNGL RWPYRK+LAGKS+E+
Sbjct: 8    QPNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRDNGLDRWPYRKYLAGKSIED 67

Query: 838  IQKDAARERKREQIELARASRQKDAAATTNSQQQGNHLSQDGR---LNGHQQNKLFQDGW 668
            I++ AARE+ +   +LA+A+ +       N   + + L Q G    L G Q   L     
Sbjct: 68   IRRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHITLTPG-- 125

Query: 667  DPARKIPAYLDEFKQGFPSNGLSTVTMRWWGGRSSD-----------GNEDEILEEESTT 521
                K    LDEFK GFPS+GLST T +WWG   SD            +ED+  + E   
Sbjct: 126  --LAKGLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKV 183

Query: 520  DEANKQLSRDNK--EDVIKEKSDVSRQGTALLSSVRERAAGEGREALKLGIYGRHGSFKP 347
            D     +  D +  E+   E +++  QGT LL+SVR+RAA EGREALKLG+Y  +G  K 
Sbjct: 184  DAGTSVVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAAEEGREALKLGVYRTYGVNKL 243

Query: 346  NRRE 335
             R++
Sbjct: 244  GRKQ 247


>gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  174 bits (441), Expect = 3e-41
 Identities = 103/244 (42%), Positives = 144/244 (59%), Gaps = 16/244 (6%)
 Frame = -3

Query: 1018 QTTPAESLTFDGIAKHFNMPIADAANLLGVCSSVLKKICRDNGLVRWPYRKFLAGKSVEE 839
            Q   ++  +++ I+KHF++P++DAAN LGVC SVLKKICR+NGL RWPYRK+LAGKS+E+
Sbjct: 8    QPNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRENGLDRWPYRKYLAGKSIED 67

Query: 838  IQKDAARERKREQIELARASRQKDAAATTNSQQQGNHLSQDGR---LNGHQQNKLFQDGW 668
            I++ AARE+ +   +LA+A+ +       N   + + L Q G    L G Q   L     
Sbjct: 68   IRRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHIMLTPG-- 125

Query: 667  DPARKIPAYLDEFKQGFPSNGLSTVTMRWWGGRSSD-----------GNEDEILEEESTT 521
                K    LDEFK GFPS+GLST T +WWG   SD            +ED+  + E   
Sbjct: 126  --LAKGLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKV 183

Query: 520  DEANKQLSRDNK--EDVIKEKSDVSRQGTALLSSVRERAAGEGREALKLGIYGRHGSFKP 347
            D     +  D +  E+   E +++  QGT LL+SVR+RA  EGREALKLG+Y  +G  K 
Sbjct: 184  DAGTSVVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVYRTYGVNKL 243

Query: 346  NRRE 335
             R++
Sbjct: 244  GRKQ 247


>emb|CBI22103.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  171 bits (432), Expect = 4e-40
 Identities = 107/287 (37%), Positives = 151/287 (52%), Gaps = 44/287 (15%)
 Frame = -3

Query: 1003 ESLTFDGIAKHFNMPIADAANLLGVCSSVLKKICRDNGLVRWPYRKFLAGKSVEEIQKDA 824
            +SL+FD ++  F++PI++AAN LGVC+SVLKKICR+NGL RWPYRKF +G SVEEI+K A
Sbjct: 11   KSLSFDDVSNCFSLPISEAANALGVCTSVLKKICRENGLQRWPYRKFQSGTSVEEIKKYA 70

Query: 823  ARERKREQIELARASRQKDAAATTNS--------------------------------QQ 740
            ARER +E  +L++   Q + A T+++                                QQ
Sbjct: 71   ARERNKELAQLSKVDVQGNDALTSSAVSAAFGSQPQNDTKSSLWKMSKLHGAIPPHMLQQ 130

Query: 739  QGNHLSQDGRLNGHQQNKLFQDGWDPARKIPAYLDEFKQGFPSNGLSTVTMRWWGGRSSD 560
            QG+   Q+GR        L       ++ I A LDEFK GFP++GL+T + +WWG  S D
Sbjct: 131  QGSRNIQNGRPQNLPNASL-------SKGIAASLDEFKYGFPTSGLATASNKWWGSSSPD 183

Query: 559  GNED------EILEEESTTDE------ANKQLSRDNKEDVIKEKSDVSRQGTALLSSVRE 416
            G E       EI EE+    E      AN  +    K +  KE+  +  QGT LL++VR+
Sbjct: 184  GYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRK 243

Query: 415  RAAGEGREALKLGIYGRHGSFKPNRREXXXXXXXXXXXXXXKWIDSS 275
                EGR+ LK+G+   HG  K  ++E              +WI+ S
Sbjct: 244  TTVEEGRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQWINGS 290


>dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  142 bits (358), Expect = 1e-31
 Identities = 87/226 (38%), Positives = 139/226 (61%), Gaps = 21/226 (9%)
 Frame = -3

Query: 1000 SLTFDGIAKHFNMPIADAANLLGVCSSVLKKICRDNGLVRWPYRKFLAGKSVEEIQKDAA 821
            SL+++ I+K F++PIA+AA++LGVC+SVLK+ICR +G+VRWPYRK ++GK   +  K+A 
Sbjct: 85   SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVSGKG--DDVKNAE 142

Query: 820  RERKREQIELARASRQK----DAAATTNS--------QQQGNHLSQDGRLNGHQQNKLFQ 677
            RE+  + +EL++ ++QK      + TT+S         QQG+  ++ G   G +QN    
Sbjct: 143  REKAMQLLELSKIAKQKAISSSGSLTTSSGAFQAVSKAQQGS--AKAGSAIG-RQNVPSL 199

Query: 676  DGWDPARKIPAYLDEFKQGFPSNGLSTVTMRWWGGRSSDGN---EDEILEEESTTDEANK 506
              +  A+ IP Y+D+FK GFPS+GLST TM+WW   S       +D+  E   +T+EA+K
Sbjct: 200  SQFSQAKDIPTYMDDFKYGFPSSGLSTETMKWWATDSHTETVAVKDDNREGSESTNEASK 259

Query: 505  QLSRD------NKEDVIKEKSDVSRQGTALLSSVRERAAGEGREAL 386
             ++ D      ++ +   +  D +   +A L S+R +AAG+GR  L
Sbjct: 260  GMTDDELDWGADEPEADADGMDAATDPSAQLCSLRRKAAGDGRRLL 305


>ref|XP_002454862.1| hypothetical protein SORBIDRAFT_03g000260 [Sorghum bicolor]
            gi|241926837|gb|EER99981.1| hypothetical protein
            SORBIDRAFT_03g000260 [Sorghum bicolor]
          Length = 289

 Score =  141 bits (355), Expect = 3e-31
 Identities = 88/246 (35%), Positives = 143/246 (58%), Gaps = 31/246 (12%)
 Frame = -3

Query: 1021 PQTTPAE-SLTFDGIAKHFNMPIADAANLLGVCSSVLKKICRDNGLVRWPYRKFLAGKSV 845
            PQ  P   SL+++ I+K F++PIA+AA++LGVC+SVLK+ICR +G+VRWPYRK ++GK+ 
Sbjct: 12   PQQKPTRVSLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKLVSGKAG 71

Query: 844  EEIQKDAARERKREQIELARASRQKDAAAT-----TNSQQQGNHLSQDGRLN-------- 704
            ++  K   R++ +E +EL++  +QK ++A+     ++S  QG   SQ G           
Sbjct: 72   DD-TKGPDRDKAKELLELSKIVKQKASSASGPSIVSSSTSQGAAKSQQGSSKAGQISVSP 130

Query: 703  --GHQQNKLFQDGWDPARKIPAYLDEFKQGFPSNGLSTVTMRWWGGRS-------SDGNE 551
              G Q           A+ IP+Y+D+FK GFPS+GLS  TM+WWG  S        DG+ 
Sbjct: 131  PAGKQNTSPSLAHGSQAKAIPSYMDDFKYGFPSSGLSCETMKWWGTSSDTDCVPAKDGSH 190

Query: 550  DEILEEESTTDEANKQLSRDNKEDVIKEKSD--------VSRQGTALLSSVRERAAGEGR 395
            +     + TT E +K ++ D++ D   ++++        V+ + +A L S+R +A  +GR
Sbjct: 191  E---AHDLTTHEPSKGMTDDDELDWGADEAEAEAEADGAVTAEASAQLCSLRRKAVDDGR 247

Query: 394  EALKLG 377
            + L  G
Sbjct: 248  KLLNGG 253


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