BLASTX nr result
ID: Cimicifuga21_contig00023540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00023540
(1096 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera] 458 e-127
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi... 454 e-125
ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2... 451 e-124
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ... 439 e-121
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar... 426 e-117
>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 458 bits (1179), Expect = e-127
Identities = 231/369 (62%), Positives = 282/369 (76%), Gaps = 4/369 (1%)
Frame = -2
Query: 1095 EGQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTY 916
+G P A LFDSIPRPTTVLWNTIIIGFICN MP +AL FYARM +SP+ K DSYT+
Sbjct: 50 QGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARM--RASPSPKFDSYTF 107
Query: 915 SSVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSP----SSVEMEEK 748
SS LKACA + LKLG+ +HC +LRSH + IV NSLLNMYSTCL+ +
Sbjct: 108 SSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNN 167
Query: 747 FDLVKKVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPA 568
DLV++VFD M KRNVVAWNTMI+WY+KT R A + F MM+MGI+PT VSFVNVFPA
Sbjct: 168 CDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
Query: 567 VAAIRDTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVE 388
V + D +N+ VLYGL++KLGSDY D F VSSAIFMY+EL +D AR++F+ +RN E
Sbjct: 228 VWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTE 287
Query: 387 VWNTMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAY 208
VWNTMI GYVQN+C E +DLF++V+E +Q D VT L++LTA+SQLQ LD G+QLHAY
Sbjct: 288 VWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAY 347
Query: 207 VIKTSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEG 28
++K+S LQV+I NA+I MYSRC + +FKVF MLERD+V+WNTMVSAFVQNG DDEG
Sbjct: 348 ILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEG 407
Query: 27 LMLVYEMKK 1
LMLV+EM+K
Sbjct: 408 LMLVFEMQK 416
Score = 163 bits (413), Expect = 6e-38
Identities = 106/368 (28%), Positives = 178/368 (48%), Gaps = 6/368 (1%)
Frame = -2
Query: 1092 GQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYS 913
G D AR +FD T +WNT+I G++ N P EA+ + +++ S D T+
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVME--SEQFXLDDVTFL 326
Query: 912 SVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPSSVEMEEKFDLVK 733
S L A + Q L LGR +H IL+S + L ++ N+++ MYS C S +
Sbjct: 327 SALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSF--------- 377
Query: 732 KVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIR 553
KVF M +R+VV WNTM++ +++ G L M K G V+ + + +R
Sbjct: 378 KVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLR 437
Query: 552 DTNNSCVLYGLLLKLG------SDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNV 391
+ L++ G Y D++A S I +L + N R+
Sbjct: 438 SQEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEK-------NSXYDRDE 490
Query: 390 EVWNTMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHA 211
WN MI+GY QN EG +F +++E + P+ VTL + L A + + + G+Q+H
Sbjct: 491 ATWNAMIAGYTQNGLSEEGFAVFRKMIE-QNVRPNAVTLASILPACNPMGTIGLGKQIHG 549
Query: 210 YVIKTSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDE 31
+ I+ + V + A++ MYS+ + A VF + LE++ V++ TM+ ++ Q+G +
Sbjct: 550 FAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGER 609
Query: 30 GLMLVYEM 7
L L + M
Sbjct: 610 ALSLFHAM 617
Score = 87.0 bits (214), Expect = 7e-15
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Frame = -2
Query: 1071 RLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYSSVLKACA 892
++F ++ V WNT++ F+ NG+ E L M DS T +++L +
Sbjct: 378 KVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMV---DSVTLTALLSLAS 434
Query: 891 DTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTC-LSPSSVEMEEKFDLVKKVFDRM 715
+ + ++G+ H ++R + G+ L++MY+ L ++ ++ EK +DR
Sbjct: 435 NLRSQEIGKQAHAYLIRHGIQFEGM-DGYLIDMYAKSGLITTAQQLFEK----NSXYDR- 488
Query: 714 SKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIRDTNNSC 535
+ WN MIA Y + G F M++ ++P V+ ++ PA +
Sbjct: 489 ---DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGK 545
Query: 534 VLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVEVWNTMISGYVQ 355
++G ++ + ++F ++ + MYS+ + A VF + ++N + TMI Y Q
Sbjct: 546 QIHGFAIRCFLNQ--NVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQ 603
Query: 354 NDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQL 217
+ L LF +L I PD+VT +A L+A S +D G ++
Sbjct: 604 HGMGERALSLFHAMLG-SGIKPDSVTFVAILSACSYAGLVDEGLRI 648
>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 454 bits (1169), Expect = e-125
Identities = 229/369 (62%), Positives = 282/369 (76%), Gaps = 4/369 (1%)
Frame = -2
Query: 1095 EGQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTY 916
+G P A LFDSIPRPTTVLWNTIIIGFICN MP +AL FYARM +SP+ K DSYT+
Sbjct: 50 QGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARM--RASPSPKFDSYTF 107
Query: 915 SSVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSP----SSVEMEEK 748
SS LKACA + LKLG+ +HC +LRSH + IV NSLLNMYSTCL+ +
Sbjct: 108 SSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNN 167
Query: 747 FDLVKKVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPA 568
DLV++VFD M KRNVVAWNTMI+WY+KT R A + F MM+MGI+PT VSFVNVFPA
Sbjct: 168 CDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
Query: 567 VAAIRDTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVE 388
V + D +N+ VLYGL++KLGSD+ D F VSSAIFMY+EL +D AR++F+ +RN E
Sbjct: 228 VWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTE 287
Query: 387 VWNTMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAY 208
VWNTMI GYVQN+C E +DLF++V+E +Q V D VT L++LTA+SQLQ L+ G+QLHAY
Sbjct: 288 VWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAY 347
Query: 207 VIKTSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEG 28
++K+S LQV+I NA+I MYSRC + +FKVF MLERD+V+WNTMVSAFVQNG DDEG
Sbjct: 348 ILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEG 407
Query: 27 LMLVYEMKK 1
LMLV+ M+K
Sbjct: 408 LMLVFAMQK 416
Score = 167 bits (424), Expect = 3e-39
Identities = 106/364 (29%), Positives = 183/364 (50%), Gaps = 2/364 (0%)
Frame = -2
Query: 1092 GQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYS 913
G D AR +FD T +WNT+I G++ N P EA+ + +++ + D T+
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVL--DDVTFL 326
Query: 912 SVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPSSVEMEEKFDLVK 733
S L A + Q L+LGR +H IL+S + L ++ N+++ MYS C S +
Sbjct: 327 SALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSF--------- 377
Query: 732 KVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIR 553
KVF M +R+VV WNTM++ +++ G L M K G V+ + + +R
Sbjct: 378 KVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLR 437
Query: 552 DTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVF--NLSPQRNVEVWN 379
+ L++ G + S I MY++ + A+++F N R+ WN
Sbjct: 438 SQEIGKQAHAYLIRHGIQFEG---MDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWN 494
Query: 378 TMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAYVIK 199
MI+GY QN EG +F +++E + P+ VTL + L A + + + G+Q+H + I+
Sbjct: 495 AMIAGYTQNGLSEEGFAVFRKMIE-QNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIR 553
Query: 198 TSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEGLML 19
+ V + A++ MYS+ + A VF + LE++ V++ TM+S++ Q+G + L L
Sbjct: 554 CFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSL 613
Query: 18 VYEM 7
+ M
Sbjct: 614 FHAM 617
Score = 88.6 bits (218), Expect = 3e-15
Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Frame = -2
Query: 1071 RLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYSSVLKACA 892
++F ++ V WNT++ F+ NG+ E L M DS T +++L +
Sbjct: 378 KVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMV---DSVTLTALLSLAS 434
Query: 891 DTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTC-LSPSSVEMEEKFDLVKKVFDRM 715
+ + ++G+ H ++R + G+ + L++MY+ L ++ ++ EK +DR
Sbjct: 435 NLRSQEIGKQAHAYLIRHGIQFEGM-DSYLIDMYAKSGLITTAQQLFEK----NSDYDR- 488
Query: 714 SKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIRDTNNSC 535
+ WN MIA Y + G F M++ ++P V+ ++ PA +
Sbjct: 489 ---DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGK 545
Query: 534 VLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVEVWNTMISGYVQ 355
++G ++ + ++F ++ + MYS+ + A VF + ++N + TMIS Y Q
Sbjct: 546 QIHGFAIRCFLN--RNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQ 603
Query: 354 NDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQL 217
+ L LF +L I PD+VT +A L+A S +D G ++
Sbjct: 604 HGMGERALSLFHAMLG-SGIKPDSVTFVAILSACSYAGLVDEGLRI 648
>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
predicted protein [Populus trichocarpa]
Length = 465
Score = 451 bits (1161), Expect = e-124
Identities = 227/368 (61%), Positives = 285/368 (77%), Gaps = 3/368 (0%)
Frame = -2
Query: 1095 EGQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTY 916
EGQP +A +LFD+ PRPTTV+ NTIIIGFICN +P EA+ FY++ L +SS TK DSYTY
Sbjct: 55 EGQPHIALQLFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSK-LKSSSLGTKFDSYTY 113
Query: 915 SSVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPS---SVEMEEKF 745
SS LKACA+T+ LK+GR +HC ++R S + IV NSLLNMYS+CLS S K+
Sbjct: 114 SSTLKACAETRSLKIGRAIHCHLIRCLSNPSRIVYNSLLNMYSSCLSNVGCLSYLDYSKY 173
Query: 744 DLVKKVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAV 565
DLV KVFD M KR+VVAWNTM++WY+KT R+ A+R F L+MKMGIKP+ VSFVNVFPA
Sbjct: 174 DLVHKVFDTMRKRDVVAWNTMVSWYVKTERYVEAIRLFRLVMKMGIKPSPVSFVNVFPAF 233
Query: 564 AAIRDTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVEV 385
+++ D N+ LYG+L+K+GS+Y DLF VSSAIFM++EL +D ARKVF+ ++N E+
Sbjct: 234 SSVEDFKNANALYGMLVKMGSEYVNDLFVVSSAIFMFAELGHIDFARKVFDHCLEKNTEI 293
Query: 384 WNTMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAYV 205
WNTMI GYVQN+ EG+DLFL+ +E +Q V D VT L+ LTAVSQLQ LD QQ HA+V
Sbjct: 294 WNTMIGGYVQNNLLIEGIDLFLKAVETEQTVLDDVTFLSVLTAVSQLQCLDLAQQQHAFV 353
Query: 204 IKTSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEGL 25
IK V+I+NA+I MYSRCN V +F+VF+KM+ERD+VSWNTM+SAFVQNG DDEGL
Sbjct: 354 IKNLAVFPVMITNAIIVMYSRCNSVHTSFEVFEKMVERDVVSWNTMISAFVQNGMDDEGL 413
Query: 24 MLVYEMKK 1
MLVYEM+K
Sbjct: 414 MLVYEMQK 421
Score = 95.5 bits (236), Expect = 2e-17
Identities = 72/300 (24%), Positives = 144/300 (48%), Gaps = 5/300 (1%)
Frame = -2
Query: 1083 DVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYSSVL 904
D+ ++FD++ + V WNT++ ++ EA+R + ++ K ++ +V
Sbjct: 174 DLVHKVFDTMRKRDVVAWNTMVSWYVKTERYVEAIRLFRLVMKMG---IKPSPVSFVNVF 230
Query: 903 KACADTQQLKLGRIVHCRILRSHSKLTG--IVANSLLNMYSTCLSPSSVEMEEKFDLVKK 730
A + + K ++ +++ S+ V +S + M++ D +K
Sbjct: 231 PAFSSVEDFKNANALYGMLVKMGSEYVNDLFVVSSAIFMFAEL---------GHIDFARK 281
Query: 729 VFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTV---VSFVNVFPAVAA 559
VFD ++N WNTMI Y++ + F + + + TV V+F++V AV+
Sbjct: 282 VFDHCLEKNTEIWNTMIGGYVQNNLLIEGIDLF--LKAVETEQTVLDDVTFLSVLTAVSQ 339
Query: 558 IRDTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVEVWN 379
++ + + + ++K + + + ++ I MYS + + +VF +R+V WN
Sbjct: 340 LQCLDLAQQQHAFVIKNLAVFP--VMITNAIIVMYSRCNSVHTSFEVFEKMVERDVVSWN 397
Query: 378 TMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAYVIK 199
TMIS +VQN EGL L ++ D+VT+ A L+A S L+ + G+Q +AY+++
Sbjct: 398 TMISAFVQNGMDDEGLMLVYE-MQKQGFAIDSVTVTALLSAASNLRSQEIGKQTYAYLLR 456
Score = 86.7 bits (213), Expect = 1e-14
Identities = 56/199 (28%), Positives = 97/199 (48%)
Frame = -2
Query: 1092 GQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYS 913
G D AR++FD T +WNT+I G++ N + E + + + + T T D T+
Sbjct: 274 GHIDFARKVFDHCLEKNTEIWNTMIGGYVQNNLLIEGIDLFLKAVETEQ--TVLDDVTFL 331
Query: 912 SVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPSSVEMEEKFDLVK 733
SVL A + Q L L + H ++++ + ++ N+++ MYS C S + F+
Sbjct: 332 SVLTAVSQLQCLDLAQQQHAFVIKNLAVFPVMITNAIIVMYSRCNS-----VHTSFE--- 383
Query: 732 KVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIR 553
VF++M +R+VV+WNTMI+ +++ G L M K G V+ + A + +R
Sbjct: 384 -VFEKMVERDVVSWNTMISAFVQNGMDDEGLMLVYEMQKQGFAIDSVTVTALLSAASNLR 442
Query: 552 DTNNSCVLYGLLLKLGSDY 496
Y LL+ G +
Sbjct: 443 SQEIGKQTYAYLLRHGIQF 461
>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329184|gb|EFH59603.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 824
Score = 439 bits (1129), Expect = e-121
Identities = 212/366 (57%), Positives = 278/366 (75%), Gaps = 1/366 (0%)
Frame = -2
Query: 1095 EGQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTY 916
EG P +AR+LFD+IP+PTTVLWNTIIIGFICN +PHEAL FY+RM T+ P TK D+YTY
Sbjct: 52 EGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA-PFTKCDAYTY 110
Query: 915 SSVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPSSVEME-EKFDL 739
SS LKACA+T+ LK G+ VHC ++R + +V NSL+NMY +CL+ E++ ++D+
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDV 170
Query: 738 VKKVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAA 559
V+KVFD M ++NVVAWNT+I+WY+KTGR + A RQF +MM+M IKP+ VSFVNVFPAVA
Sbjct: 171 VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVAT 230
Query: 558 IRDTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVEVWN 379
R + V YGL+LKLG +Y DLF VSSAI MY+EL D++++R+VF+ +RN+EVWN
Sbjct: 231 SRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWN 290
Query: 378 TMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAYVIK 199
TMI YVQNDC E ++LFL + +IV D VT L + +AVS LQ+++ G+Q H +V K
Sbjct: 291 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSK 350
Query: 198 TSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEGLML 19
L ++I N+++ MYSRC +V +F VF M ERD+VSWNTM+SAFVQNG DDEGLML
Sbjct: 351 NFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLML 410
Query: 18 VYEMKK 1
VYEM+K
Sbjct: 411 VYEMQK 416
Score = 156 bits (394), Expect = 1e-35
Identities = 105/366 (28%), Positives = 187/366 (51%), Gaps = 2/366 (0%)
Frame = -2
Query: 1092 GQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYS 913
G + +RR+FDS +WNT+I ++ N E++ + + S SD T+
Sbjct: 269 GDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG--SKEIVSDEVTFL 326
Query: 912 SVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPSSVEMEEKFDLVK 733
A + QQ++LGR H + ++ +L ++ NSL+ MYS C +++ F
Sbjct: 327 LAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGF-----VQKSFG--- 378
Query: 732 KVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIR 553
VF M +R+VV+WNTMI+ +++ G L M K G K ++ + A + +R
Sbjct: 379 -VFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLR 437
Query: 552 DTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLS--PQRNVEVWN 379
+ +G L++ G + S I MY++ + ++K+F S +R+ WN
Sbjct: 438 NKEIGKQTHGFLIRQGIQFEG---MNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWN 494
Query: 378 TMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAYVIK 199
+MISGY QN E +F ++LE I P+ VT+ + L A SQ+ +D G+QLH + I+
Sbjct: 495 SMISGYTQNGHTEETFLVFRKMLE-QNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIR 553
Query: 198 TSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEGLML 19
+ V +++A++ MYS+ + A +F + ER+ V++ TM+ + Q+G + + L
Sbjct: 554 QYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISL 613
Query: 18 VYEMKK 1
M++
Sbjct: 614 FLSMQE 619
Score = 102 bits (254), Expect = 2e-19
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 5/289 (1%)
Frame = -2
Query: 1068 LFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYSSVLKACAD 889
+F S+ V WNT+I F+ NG+ E L M K D T +++L A ++
Sbjct: 379 VFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF---KIDYITVTALLSAASN 435
Query: 888 TQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPSSVEMEEKFDLVK---KVFDR 718
+ ++G+ H ++R + G+ NS L ++M K L++ K+F+
Sbjct: 436 LRNKEIGKQTHGFLIRQGIQFEGM--NSYL-----------IDMYAKSGLIRISQKLFEG 482
Query: 717 M--SKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIRDTN 544
++R+ WN+MI+ Y + G F M++ I+P V+ ++ PA + + +
Sbjct: 483 SGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVD 542
Query: 543 NSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVEVWNTMISG 364
L+G ++ D ++F S+ + MYS+ + A +F+ + +RN + TMI G
Sbjct: 543 LGKQLHGFSIRQYLDQ--NVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILG 600
Query: 363 YVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQL 217
Y Q+ + LFL + EL I PD + +A L+A S +D G ++
Sbjct: 601 YGQHGMGERAISLFLSMQELG-IKPDAIAFVAVLSACSYSGLVDEGLKI 648
Score = 80.5 bits (197), Expect = 7e-13
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 19/273 (6%)
Frame = -2
Query: 771 SSVEMEEKFDLVKKVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMG--IKPT 598
S + E L +++FD + K V WNT+I +I AL ++ M K K
Sbjct: 47 SKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCD 106
Query: 597 VVSFVNVFPAVAAIRD---------------TNNSCVLYGLLLKLGSDYATDLFAVSSAI 463
++ + A A ++ N+S V++ L+ + Y + L A S +
Sbjct: 107 AYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNM---YVSCLNAPGSEL 163
Query: 462 FMYSELADMDAARKVFNLSPQRNVEVWNTMISGYVQNDCFHEGLDLFLRVLELDQIVPDT 283
+ + D RKVF+ ++NV WNT+IS YV+ E F ++ + +I P
Sbjct: 164 ----DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRM-EIKPSP 218
Query: 282 VTLLASLTAVSQLQRLDFGQQLHAYVIK--TSMALQVIISNAVISMYSRCNYVDVAFKVF 109
V+ + AV+ + + + ++K + + ++ ISMY+ ++ + +VF
Sbjct: 219 VSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVF 278
Query: 108 DKMLERDLVSWNTMVSAFVQNGFDDEGLMLVYE 10
D +ER++ WNTM+ +VQN E + L E
Sbjct: 279 DSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 311
>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|110739449|dbj|BAF01634.1|
hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 426 bits (1096), Expect = e-117
Identities = 209/366 (57%), Positives = 274/366 (74%), Gaps = 1/366 (0%)
Frame = -2
Query: 1095 EGQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTY 916
+G P +AR+LFD+IP+PTTVLWNTIIIGFICN +PHEAL FY+RM T+ P T D+YTY
Sbjct: 52 DGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA-PFTNCDAYTY 110
Query: 915 SSVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLS-PSSVEMEEKFDL 739
SS LKACA+T+ LK G+ VHC ++R + +V NSL+NMY +CL+ P E +D+
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE----YDV 166
Query: 738 VKKVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAA 559
V+KVFD M ++NVVAWNT+I+WY+KTGR + A RQF +MM+M +KP+ VSFVNVFPAV+
Sbjct: 167 VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSI 226
Query: 558 IRDTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLSPQRNVEVWN 379
R + V YGL+LKLG +Y DLF VSSAI MY+EL D++++R+VF+ +RN+EVWN
Sbjct: 227 SRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 378 TMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAYVIK 199
TMI YVQNDC E ++LFL + +IV D VT L + +AVS LQ+++ G+Q H +V K
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 198 TSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEGLML 19
L ++I N+++ MYSRC V +F VF M ERD+VSWNTM+SAFVQNG DDEGLML
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 18 VYEMKK 1
VYEM+K
Sbjct: 407 VYEMQK 412
Score = 155 bits (392), Expect = 2e-35
Identities = 106/366 (28%), Positives = 186/366 (50%), Gaps = 2/366 (0%)
Frame = -2
Query: 1092 GQPDVARRLFDSIPRPTTVLWNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYS 913
G + +RR+FDS +WNT+I ++ N E++ + + S SD TY
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG--SKEIVSDEVTYL 322
Query: 912 SVLKACADTQQLKLGRIVHCRILRSHSKLTGIVANSLLNMYSTCLSPSSVEMEEKFDLVK 733
A + QQ++LGR H + ++ +L ++ NSL+ MYS C S + + F
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGS-----VHKSFG--- 374
Query: 732 KVFDRMSKRNVVAWNTMIAWYIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPAVAAIR 553
VF M +R+VV+WNTMI+ +++ G L M K G K ++ + A + +R
Sbjct: 375 -VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLR 433
Query: 552 DTNNSCVLYGLLLKLGSDYATDLFAVSSAIFMYSELADMDAARKVFNLS--PQRNVEVWN 379
+ + L++ G + S I MYS+ + ++K+F S +R+ WN
Sbjct: 434 NKEIGKQTHAFLIRQGIQFEG---MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 378 TMISGYVQNDCFHEGLDLFLRVLELDQIVPDTVTLLASLTAVSQLQRLDFGQQLHAYVIK 199
+MISGY QN + +F ++LE I P+ VT+ + L A SQ+ +D G+QLH + I+
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLE-QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 198 TSMALQVIISNAVISMYSRCNYVDVAFKVFDKMLERDLVSWNTMVSAFVQNGFDDEGLML 19
+ V +++A++ MYS+ + A +F + ER+ V++ TM+ + Q+G + + L
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 18 VYEMKK 1
M++
Sbjct: 610 FLSMQE 615
Score = 68.6 bits (166), Expect = 3e-09
Identities = 44/155 (28%), Positives = 76/155 (49%)
Frame = -2
Query: 1032 WNTIIIGFICNGMPHEALRFYARMLNTSSPTTKSDSYTYSSVLKACADTQQLKLGRIVHC 853
WN++I G+ NG + + +ML + + ++ T +S+L AC+ + LG+ +H
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQN---IRPNAVTVASILPACSQIGSVDLGKQLHG 545
Query: 852 RILRSHSKLTGIVANSLLNMYSTCLSPSSVEMEEKFDLVKKVFDRMSKRNVVAWNTMIAW 673
+R + VA++L++MYS + E +F + +RN V + TMI
Sbjct: 546 FSIRQYLDQNVFVASALVDMYSKAGAIKYAE---------DMFSQTKERNSVTYTTMILG 596
Query: 672 YIKTGRFSNALRQFTLMMKMGIKPTVVSFVNVFPA 568
Y + G A+ F M + GIKP ++FV V A
Sbjct: 597 YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631