BLASTX nr result

ID: Cimicifuga21_contig00023538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023538
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632136.1| PREDICTED: cell division control protein 6 h...   155   3e-36
emb|CBI15981.3| unnamed protein product [Vitis vinifera]              155   3e-36
emb|CAN65662.1| hypothetical protein VITISV_014916 [Vitis vinifera]   154   9e-36
ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
emb|CAC18552.1| cell division cycle protein [Nicotiana tabacum]       146   1e-33

>ref|XP_003632136.1| PREDICTED: cell division control protein 6 homolog [Vitis vinifera]
          Length = 497

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/112 (64%), Positives = 92/112 (82%)
 Frame = -3

Query: 336 SMEKVKHNLIDWVKEGGFHQPNILAVNCTSLGNTNDIFNKILEMYQPRKKVNGAMSALQH 157
           SMEKV+  L+DW  + GF  P++L++NCTSL NT +IF+KILE +QPRKK   + S LQH
Sbjct: 152 SMEKVRRALVDWAGQAGFQPPDLLSINCTSLTNTQEIFSKILEKHQPRKKTKSSTSPLQH 211

Query: 156 LQKIFSQKKRPSSQKMMIIIADELDYLITKDRSVLHDLFMLTSLPFSGCILI 1
           L+ I+S+K++ S  KMM+IIADELDYLIT+DR+VLHDLFMLT+LPFS CILI
Sbjct: 212 LRNIYSKKQQSSGMKMMLIIADELDYLITRDRTVLHDLFMLTTLPFSSCILI 263


>emb|CBI15981.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/112 (64%), Positives = 92/112 (82%)
 Frame = -3

Query: 336 SMEKVKHNLIDWVKEGGFHQPNILAVNCTSLGNTNDIFNKILEMYQPRKKVNGAMSALQH 157
           SMEKV+  L+DW  + GF  P++L++NCTSL NT +IF+KILE +QPRKK   + S LQH
Sbjct: 152 SMEKVRRALVDWAGQAGFQPPDLLSINCTSLTNTQEIFSKILEKHQPRKKTKSSTSPLQH 211

Query: 156 LQKIFSQKKRPSSQKMMIIIADELDYLITKDRSVLHDLFMLTSLPFSGCILI 1
           L+ I+S+K++ S  KMM+IIADELDYLIT+DR+VLHDLFMLT+LPFS CILI
Sbjct: 212 LRNIYSKKQQSSGMKMMLIIADELDYLITRDRTVLHDLFMLTTLPFSSCILI 263


>emb|CAN65662.1| hypothetical protein VITISV_014916 [Vitis vinifera]
          Length = 198

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/111 (63%), Positives = 91/111 (81%)
 Frame = -3

Query: 333 MEKVKHNLIDWVKEGGFHQPNILAVNCTSLGNTNDIFNKILEMYQPRKKVNGAMSALQHL 154
           MEKV+  L+DW  + GF  P++L++NCTSL NT +IF+KILE +QPRKK   + S LQHL
Sbjct: 1   MEKVRRALVDWAGQAGFQPPDLLSINCTSLTNTQEIFSKILEKHQPRKKTKSSTSPLQHL 60

Query: 153 QKIFSQKKRPSSQKMMIIIADELDYLITKDRSVLHDLFMLTSLPFSGCILI 1
           + I+S+K++ S  KMM+IIADELDYLIT+DR+VLHDLFMLT+LPFS CILI
Sbjct: 61  RNIYSKKQQSSGMKMMLIIADELDYLITRDRTVLHDLFMLTTLPFSSCILI 111


>ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|222847075|gb|EEE84622.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/112 (63%), Positives = 90/112 (80%)
 Frame = -3

Query: 336 SMEKVKHNLIDWVKEGGFHQPNILAVNCTSLGNTNDIFNKILEMYQPRKKVNGAMSALQH 157
           SMEKVK  L+DW KE GF  P++L +NCTSL  T++IF K++E  QP KK+NG+ S LQH
Sbjct: 158 SMEKVKQCLVDWAKEAGFQPPDVLTMNCTSLTKTSEIFKKVMEKNQPGKKINGSTSPLQH 217

Query: 156 LQKIFSQKKRPSSQKMMIIIADELDYLITKDRSVLHDLFMLTSLPFSGCILI 1
           LQ ++SQ+++    KMM+IIADELDYLITKDR+VL+DLFMLT+ PFS CILI
Sbjct: 218 LQNLYSQQQKSLGSKMMLIIADELDYLITKDRAVLYDLFMLTTFPFSRCILI 269


>emb|CAC18552.1| cell division cycle protein [Nicotiana tabacum]
          Length = 185

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/112 (61%), Positives = 92/112 (82%)
 Frame = -3

Query: 336 SMEKVKHNLIDWVKEGGFHQPNILAVNCTSLGNTNDIFNKILEMYQPRKKVNGAMSALQH 157
           SMEKVK  L++W  E GF  P+IL+VNCTSL NT+DIF K+L+  QPR+K+N + + LQ+
Sbjct: 2   SMEKVKEVLVNWADESGFQAPDILSVNCTSLSNTSDIFGKMLDKIQPRRKLNCSTAPLQY 61

Query: 156 LQKIFSQKKRPSSQKMMIIIADELDYLITKDRSVLHDLFMLTSLPFSGCILI 1
           LQK+FS+K++P+  KM++I+ADELDYLITKD+ VLH+LFMLT+ PFS  ILI
Sbjct: 62  LQKMFSEKQQPAGTKMLLIVADELDYLITKDKVVLHELFMLTTSPFSRFILI 113


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