BLASTX nr result

ID: Cimicifuga21_contig00023528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023528
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271089.2| PREDICTED: anaphase-promoting complex subuni...   314   8e-84
emb|CBI23321.3| unnamed protein product [Vitis vinifera]              314   8e-84
ref|XP_003635005.1| PREDICTED: anaphase-promoting complex subuni...   313   2e-83
emb|CBI23319.3| unnamed protein product [Vitis vinifera]              313   2e-83
ref|NP_193884.6| anaphase-promoting complex subunit 4 [Arabidops...   288   6e-76

>ref|XP_002271089.2| PREDICTED: anaphase-promoting complex subunit 4-like [Vitis
           vinifera]
          Length = 767

 Score =  314 bits (805), Expect = 8e-84
 Identities = 160/213 (75%), Positives = 180/213 (84%)
 Frame = +1

Query: 16  LDKQDTFRLANASIYKVALSKDLCHLIVMSFGELVKEKIDLQDGQISRHDSLAGLHCLLL 195
           +D Q T+RL NASI KVALSKDLCHLIV   GELV+E ++ +D  I  H  L GLH L+L
Sbjct: 210 MDNQVTYRLLNASICKVALSKDLCHLIVTCSGELVEESVESRDRHIFGH-GLLGLHSLVL 268

Query: 196 DTSIFQKRKNELHQVAQQASNIEDLIEVFRSSLSIMCKQWTDAMHTFHEKFDLLSPLIVD 375
           DTSIF KRKNELHQVAQQASNIEDL EV R+SLS+MCKQW+DAMH FHEKFD LS LI+D
Sbjct: 269 DTSIFWKRKNELHQVAQQASNIEDLTEVIRASLSVMCKQWSDAMHMFHEKFDSLSSLIID 328

Query: 376 HALDSCPQEEFLSLLGGARTSPPIHQFLVNSLGESGLKRVSKAIDSAGKELHLIIREHLQ 555
           H LDS PQEEFLSLL GARTSPP+HQFLV+SLGE GLKRVSKA+ +AGKEL  I+ +HLQ
Sbjct: 329 HGLDSSPQEEFLSLLCGARTSPPLHQFLVSSLGEVGLKRVSKAVSNAGKELQFIVLDHLQ 388

Query: 556 PAAEIIGFRIGELRGLSRWRARYEGIGLDEKLI 654
           PAAEIIGFR+GELRGLSRWR RY+ IGLDE+LI
Sbjct: 389 PAAEIIGFRMGELRGLSRWRTRYKVIGLDERLI 421


>emb|CBI23321.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  314 bits (805), Expect = 8e-84
 Identities = 160/213 (75%), Positives = 180/213 (84%)
 Frame = +1

Query: 16  LDKQDTFRLANASIYKVALSKDLCHLIVMSFGELVKEKIDLQDGQISRHDSLAGLHCLLL 195
           +D Q T+RL NASI KVALSKDLCHLIV   GELV+E ++ +D  I  H  L GLH L+L
Sbjct: 210 MDNQVTYRLLNASICKVALSKDLCHLIVTCSGELVEESVESRDRHIFGH-GLLGLHSLVL 268

Query: 196 DTSIFQKRKNELHQVAQQASNIEDLIEVFRSSLSIMCKQWTDAMHTFHEKFDLLSPLIVD 375
           DTSIF KRKNELHQVAQQASNIEDL EV R+SLS+MCKQW+DAMH FHEKFD LS LI+D
Sbjct: 269 DTSIFWKRKNELHQVAQQASNIEDLTEVIRASLSVMCKQWSDAMHMFHEKFDSLSSLIID 328

Query: 376 HALDSCPQEEFLSLLGGARTSPPIHQFLVNSLGESGLKRVSKAIDSAGKELHLIIREHLQ 555
           H LDS PQEEFLSLL GARTSPP+HQFLV+SLGE GLKRVSKA+ +AGKEL  I+ +HLQ
Sbjct: 329 HGLDSSPQEEFLSLLCGARTSPPLHQFLVSSLGEVGLKRVSKAVSNAGKELQFIVLDHLQ 388

Query: 556 PAAEIIGFRIGELRGLSRWRARYEGIGLDEKLI 654
           PAAEIIGFR+GELRGLSRWR RY+ IGLDE+LI
Sbjct: 389 PAAEIIGFRMGELRGLSRWRTRYKVIGLDERLI 421


>ref|XP_003635005.1| PREDICTED: anaphase-promoting complex subunit 4-like [Vitis
           vinifera]
          Length = 543

 Score =  313 bits (801), Expect = 2e-83
 Identities = 159/213 (74%), Positives = 181/213 (84%)
 Frame = +1

Query: 16  LDKQDTFRLANASIYKVALSKDLCHLIVMSFGELVKEKIDLQDGQISRHDSLAGLHCLLL 195
           +D Q T+RL NASI KVALSKDLCHLIV   GELV++ ++ +D  I  H  L GLH L+L
Sbjct: 147 MDNQVTYRLLNASICKVALSKDLCHLIVTCSGELVEQSVESRDRHIFGH-GLLGLHSLVL 205

Query: 196 DTSIFQKRKNELHQVAQQASNIEDLIEVFRSSLSIMCKQWTDAMHTFHEKFDLLSPLIVD 375
           +TSIF KRKNELHQVAQQASNIEDL EV R+SLS+MCKQW+DAMH FHEKFD LS LI+D
Sbjct: 206 NTSIFWKRKNELHQVAQQASNIEDLTEVIRASLSVMCKQWSDAMHMFHEKFDSLSSLIID 265

Query: 376 HALDSCPQEEFLSLLGGARTSPPIHQFLVNSLGESGLKRVSKAIDSAGKELHLIIREHLQ 555
           H LDS PQEEFLSLL GARTSPP+HQFLV+SLGE GLKRVSKA+ +AGKEL LI+ +HLQ
Sbjct: 266 HGLDSSPQEEFLSLLCGARTSPPLHQFLVSSLGEVGLKRVSKAVSNAGKELQLIVLDHLQ 325

Query: 556 PAAEIIGFRIGELRGLSRWRARYEGIGLDEKLI 654
           PAAEIIGFR+GELRGLSRWR RY+ IGLDE+LI
Sbjct: 326 PAAEIIGFRMGELRGLSRWRTRYKVIGLDERLI 358


>emb|CBI23319.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  313 bits (801), Expect = 2e-83
 Identities = 159/213 (74%), Positives = 181/213 (84%)
 Frame = +1

Query: 16  LDKQDTFRLANASIYKVALSKDLCHLIVMSFGELVKEKIDLQDGQISRHDSLAGLHCLLL 195
           +D Q T+RL NASI KVALSKDLCHLIV   GELV++ ++ +D  I  H  L GLH L+L
Sbjct: 137 MDNQVTYRLLNASICKVALSKDLCHLIVTCSGELVEQSVESRDRHIFGH-GLLGLHSLVL 195

Query: 196 DTSIFQKRKNELHQVAQQASNIEDLIEVFRSSLSIMCKQWTDAMHTFHEKFDLLSPLIVD 375
           +TSIF KRKNELHQVAQQASNIEDL EV R+SLS+MCKQW+DAMH FHEKFD LS LI+D
Sbjct: 196 NTSIFWKRKNELHQVAQQASNIEDLTEVIRASLSVMCKQWSDAMHMFHEKFDSLSSLIID 255

Query: 376 HALDSCPQEEFLSLLGGARTSPPIHQFLVNSLGESGLKRVSKAIDSAGKELHLIIREHLQ 555
           H LDS PQEEFLSLL GARTSPP+HQFLV+SLGE GLKRVSKA+ +AGKEL LI+ +HLQ
Sbjct: 256 HGLDSSPQEEFLSLLCGARTSPPLHQFLVSSLGEVGLKRVSKAVSNAGKELQLIVLDHLQ 315

Query: 556 PAAEIIGFRIGELRGLSRWRARYEGIGLDEKLI 654
           PAAEIIGFR+GELRGLSRWR RY+ IGLDE+LI
Sbjct: 316 PAAEIIGFRMGELRGLSRWRTRYKVIGLDERLI 348


>ref|NP_193884.6| anaphase-promoting complex subunit 4 [Arabidopsis thaliana]
           gi|302595935|sp|O65418.2|APC4_ARATH RecName:
           Full=Anaphase-promoting complex subunit 4; AltName:
           Full=Cyclosome subunit 4 gi|332659063|gb|AEE84463.1|
           anaphase-promoting complex subunit 4 [Arabidopsis
           thaliana]
          Length = 777

 Score =  288 bits (737), Expect = 6e-76
 Identities = 149/216 (68%), Positives = 174/216 (80%)
 Frame = +1

Query: 7   IPHLDKQDTFRLANASIYKVALSKDLCHLIVMSFGELVKEKIDLQDGQISRHDSLAGLHC 186
           +PHLD+  + +L NASIYKVALSKDLC L+VM  GEL    I  ++ +I+  D L GLHC
Sbjct: 211 VPHLDEHASCKLFNASIYKVALSKDLCRLVVMCTGELKDCDIKPREEKINVQD-LPGLHC 269

Query: 187 LLLDTSIFQKRKNELHQVAQQASNIEDLIEVFRSSLSIMCKQWTDAMHTFHEKFDLLSPL 366
           L +DTSIF KRK ELHQVAQQASNIEDL EV R+SLS+M KQW DAM TFHEKF  LS L
Sbjct: 270 LAMDTSIFWKRKYELHQVAQQASNIEDLTEVIRASLSVMNKQWADAMKTFHEKFHSLSTL 329

Query: 367 IVDHALDSCPQEEFLSLLGGARTSPPIHQFLVNSLGESGLKRVSKAIDSAGKELHLIIRE 546
           I+D+ L+S PQEEFLSLLGGAR SP ++QFLVNSLGE G+KRV K++   GKEL  ++ +
Sbjct: 330 IIDNGLESSPQEEFLSLLGGARISPALNQFLVNSLGEVGVKRVLKSVCGTGKELQQVVLD 389

Query: 547 HLQPAAEIIGFRIGELRGLSRWRARYEGIGLDEKLI 654
           HLQPAAEIIGFRIGELRGLSRWRARY+GIGLDE L+
Sbjct: 390 HLQPAAEIIGFRIGELRGLSRWRARYQGIGLDEMLL 425


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