BLASTX nr result

ID: Cimicifuga21_contig00023524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023524
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ...   119   1e-34
emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]    69   4e-10
ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc...    68   9e-10
ref|XP_002518611.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
           gi|355477332|gb|AES58535.1| hypothetical protein
           MTR_1g005250 [Medicago truncatula]
          Length = 197

 Score =  119 bits (297), Expect(2) = 1e-34
 Identities = 59/66 (89%), Positives = 60/66 (90%)
 Frame = -1

Query: 199 YCSMEAGGLLEVRPGFSGVVGEGFTFLTHILSYRHGPIDLFSIGASSNATRFYLTKPRAR 20
           Y SMEAGGLLEVRPGF GVVGEG TFLTHI SYRHGP DLFSIGASS+ATRFYLTKPRAR
Sbjct: 111 YFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGASSSATRFYLTKPRAR 170

Query: 19  LRREFA 2
            RREFA
Sbjct: 171 PRREFA 176



 Score = 52.8 bits (125), Expect(2) = 1e-34
 Identities = 32/55 (58%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -3

Query: 386 EIDQPAGLVWLFLSIE-KESAVCASHLLLGSAGRHGILVQI*AGRTCDGSQGSNM 225
           EIDQPAGLVWLFLSIE KESAVC                   AGRTCDGS  SN+
Sbjct: 65  EIDQPAGLVWLFLSIEKKESAVC-------------------AGRTCDGSPRSNI 100


>emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]
          Length = 124

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -1

Query: 109 LSYRHGPIDLFSIGASSNATRFYLTKPRARLRREFA 2
           LSYRHGP DLFSIGASS+ATRFYLTKPRAR RREFA
Sbjct: 68  LSYRHGPTDLFSIGASSSATRFYLTKPRARPRREFA 103


>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
           gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
           [Medicago truncatula]
          Length = 187

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/38 (89%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
 Frame = -3

Query: 386 EIDQPAGLVWLFLSIE-KESAVCASHLLLGSAGRHGIL 276
           EIDQPAGLVWLFLSIE KESAVCASHLLLGSAGRH  +
Sbjct: 47  EIDQPAGLVWLFLSIEKKESAVCASHLLLGSAGRHAFV 84


>ref|XP_002518611.1| conserved hypothetical protein [Ricinus communis]
           gi|223542210|gb|EEF43753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/38 (76%), Positives = 31/38 (81%)
 Frame = -1

Query: 115 HILSYRHGPIDLFSIGASSNATRFYLTKPRARLRREFA 2
           HI SYRH P DLFSIGASS+ T+FYLTKP A  RREFA
Sbjct: 2   HIQSYRHSPTDLFSIGASSSTTQFYLTKPHAHPRREFA 39


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