BLASTX nr result
ID: Cimicifuga21_contig00023524
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00023524 (388 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ... 119 1e-34 emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera] 69 4e-10 ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc... 68 9e-10 ref|XP_002518611.1| conserved hypothetical protein [Ricinus comm... 62 5e-08 >ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula] gi|355477332|gb|AES58535.1| hypothetical protein MTR_1g005250 [Medicago truncatula] Length = 197 Score = 119 bits (297), Expect(2) = 1e-34 Identities = 59/66 (89%), Positives = 60/66 (90%) Frame = -1 Query: 199 YCSMEAGGLLEVRPGFSGVVGEGFTFLTHILSYRHGPIDLFSIGASSNATRFYLTKPRAR 20 Y SMEAGGLLEVRPGF GVVGEG TFLTHI SYRHGP DLFSIGASS+ATRFYLTKPRAR Sbjct: 111 YFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGASSSATRFYLTKPRAR 170 Query: 19 LRREFA 2 RREFA Sbjct: 171 PRREFA 176 Score = 52.8 bits (125), Expect(2) = 1e-34 Identities = 32/55 (58%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = -3 Query: 386 EIDQPAGLVWLFLSIE-KESAVCASHLLLGSAGRHGILVQI*AGRTCDGSQGSNM 225 EIDQPAGLVWLFLSIE KESAVC AGRTCDGS SN+ Sbjct: 65 EIDQPAGLVWLFLSIEKKESAVC-------------------AGRTCDGSPRSNI 100 >emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera] Length = 124 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = -1 Query: 109 LSYRHGPIDLFSIGASSNATRFYLTKPRARLRREFA 2 LSYRHGP DLFSIGASS+ATRFYLTKPRAR RREFA Sbjct: 68 LSYRHGPTDLFSIGASSSATRFYLTKPRARPRREFA 103 >ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula] gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F [Medicago truncatula] Length = 187 Score = 67.8 bits (164), Expect = 9e-10 Identities = 34/38 (89%), Positives = 35/38 (92%), Gaps = 1/38 (2%) Frame = -3 Query: 386 EIDQPAGLVWLFLSIE-KESAVCASHLLLGSAGRHGIL 276 EIDQPAGLVWLFLSIE KESAVCASHLLLGSAGRH + Sbjct: 47 EIDQPAGLVWLFLSIEKKESAVCASHLLLGSAGRHAFV 84 >ref|XP_002518611.1| conserved hypothetical protein [Ricinus communis] gi|223542210|gb|EEF43753.1| conserved hypothetical protein [Ricinus communis] Length = 60 Score = 62.0 bits (149), Expect = 5e-08 Identities = 29/38 (76%), Positives = 31/38 (81%) Frame = -1 Query: 115 HILSYRHGPIDLFSIGASSNATRFYLTKPRARLRREFA 2 HI SYRH P DLFSIGASS+ T+FYLTKP A RREFA Sbjct: 2 HIQSYRHSPTDLFSIGASSSTTQFYLTKPHAHPRREFA 39