BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023498
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containi...   261   5e-68
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   261   5e-68
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   261   5e-68
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...   247   8e-64
ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containi...   238   3e-61

>ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  261 bits (666), Expect = 5e-68
 Identities = 120/163 (73%), Positives = 139/163 (85%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M+FRGCPLD ITYNGL+K LC+ G +EKGL LFE+M  KG+ PNN+SCNILINGLCRTG
Sbjct: 179 DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 238

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
            IQ ALE LRDMIH+GLTPDIVTYNSLINGLCK GR +EA NL DKLQVEG+ PD ITYN
Sbjct: 239 NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 298

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           TL+SW+CK  MFDDAHLLL +GVD+G +PN  TW IL++NFI+
Sbjct: 299 TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 341



 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/135 (42%), Positives = 83/135 (61%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM  +GC  +VITY  L+   CKEG +E+   + +EM  KG+A N V  N LI+ LC+  
Sbjct: 39  EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 98

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           ++Q AL +  DM  +G  PDI T+NSLI GLCK+ +  EA  L   + +EGV+ +TITYN
Sbjct: 99  KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 158

Query: 363 TLMSWYCKASMFDDA 407
           TL+  + +     +A
Sbjct: 159 TLIHAFLRRGAMQEA 173



 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/162 (35%), Positives = 94/162 (58%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGR 185
           M+  GC  D+ TYN L+  LCK+G +     L  EM+ KG  PN ++  ILI+  C+ GR
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 186 IQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNT 365
           ++ A  +L +M  +GL  + V YN LI+ LCK  ++++A N+   +  +G  PD  T+N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 366 LMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           L+   CK + F++A  L    +  G++ N  T+  LI+ F+R
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 166



 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/163 (34%), Positives = 89/163 (54%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM  +G  L+ + YN L+  LCK+  V+  L +F +M  KG  P+  + N LI GLC+  
Sbjct: 74  EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVN 133

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           + + AL L +DM+ +G+  + +TYN+LI+   + G ++EA  L++ +   G   D ITYN
Sbjct: 134 KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 193

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            L+   C+A   +    L    +  G+ PN  +  ILIN   R
Sbjct: 194 GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 236



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/126 (34%), Positives = 69/126 (54%)
 Frame = +3

Query: 99  LFEEMRRKGVAPNNVSCNILINGLCRTGRIQMALELLRDMIHQGLTPDIVTYNSLINGLC 278
           + E M   G  P+  + N LI GLC+ G +  A EL+ +M  +G  P+++TY  LI+  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 279 KMGRIREATNLLDKLQVEGVVPDTITYNTLMSWYCKASMFDDAHLLLCKGVDNGIVPNVR 458
           K GR+ EA N+LD++  +G+  + + YN L+S  CK     DA  +       G  P++ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 459 TWEILI 476
           T+  LI
Sbjct: 121 TFNSLI 126



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/95 (33%), Positives = 55/95 (57%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M+ RG   D++TYN L+  LCK G  ++ L LF++++ +G+ P+ ++ N LI+  C+ G
Sbjct: 249 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 308

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMG 287
               A  LL   +  G  P+ VT+  L++   K G
Sbjct: 309 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  261 bits (666), Expect = 5e-68
 Identities = 120/163 (73%), Positives = 139/163 (85%)
 Frame = +3

Query: 3    EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
            +M+FRGCPLD ITYNGL+K LC+ G +EKGL LFE+M  KG+ PNN+SCNILINGLCRTG
Sbjct: 572  DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 631

Query: 183  RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
             IQ ALE LRDMIH+GLTPDIVTYNSLINGLCK GR +EA NL DKLQVEG+ PD ITYN
Sbjct: 632  NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 691

Query: 363  TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            TL+SW+CK  MFDDAHLLL +GVD+G +PN  TW IL++NFI+
Sbjct: 692  TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/135 (42%), Positives = 83/135 (61%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM  +GC  +VITY  L+   CKEG +E+   + +EM  KG+A N V  N LI+ LC+  
Sbjct: 432 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           ++Q AL +  DM  +G  PDI T+NSLI GLCK+ +  EA  L   + +EGV+ +TITYN
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 551

Query: 363 TLMSWYCKASMFDDA 407
           TL+  + +     +A
Sbjct: 552 TLIHAFLRRGAMQEA 566



 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/170 (37%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM+ +G    V T+  ++K LC    V+    L ++M R G  PN +    LI+ L + G
Sbjct: 225 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVG 284

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           R+   L+LL +M+  G  PD+ T+N  I+GLCKM RI EA  L+D++ + G  P++ TY 
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFI-RHYVDES 509
            LM   C+    D+A +LL K V N   PNV  +  LIN ++ R  +DE+
Sbjct: 345 VLMHGLCRMGKVDEARMLLNK-VPN---PNVVLFNTLINGYVSRGRLDEA 390



 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/162 (35%), Positives = 94/162 (58%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGR 185
           M+  GC  D+ TYN L+  LCK+G +     L  EM+ KG  PN ++  ILI+  C+ GR
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457

Query: 186 IQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNT 365
           ++ A  +L +M  +GL  + V YN LI+ LCK  ++++A N+   +  +G  PD  T+N+
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517

Query: 366 LMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           L+   CK + F++A  L    +  G++ N  T+  LI+ F+R
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 559



 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/163 (34%), Positives = 89/163 (54%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM  +G  L+ + YN L+  LCK+  V+  L +F +M  KG  P+  + N LI GLC+  
Sbjct: 467 EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVN 526

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           + + AL L +DM+ +G+  + +TYN+LI+   + G ++EA  L++ +   G   D ITYN
Sbjct: 527 KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 586

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            L+   C+A   +    L    +  G+ PN  +  ILIN   R
Sbjct: 587 GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 629



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGR 185
           M+ RG   +  TY  L+  LC+ G V++   L  ++      PN V  N LING    GR
Sbjct: 331 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGR 386

Query: 186 IQMALELLRD-MIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           +  A  ++ + M+  G  PDI TYN+LI GLCK G +  A  L++++Q++G  P+ ITY 
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILIN 479
            L+  +CK    ++A  +L +    G+  N   +  LI+
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
 Frame = +3

Query: 30  DVITYNGLLKELCKEGAVEKGLGLFEE-MRRKGVAPNNVSCNILINGLCRTGRIQMALEL 206
           +V+ +N L+      G +++   +  E M   G  P+  + N LI GLC+ G +  A EL
Sbjct: 370 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 429

Query: 207 LRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNTLMSWYCK 386
           + +M  +G  P+++TY  LI+  CK GR+ EA N+LD++  +G+  + + YN L+S  CK
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 489

Query: 387 ASMFDDAHLLLCKGVDNGIVPNVRTWEILI 476
                DA  +       G  P++ T+  LI
Sbjct: 490 DEKVQDALNMFGDMSSKGCKPDIFTFNSLI 519



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/95 (33%), Positives = 55/95 (57%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M+ RG   D++TYN L+  LCK G  ++ L LF++++ +G+ P+ ++ N LI+  C+ G
Sbjct: 642 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 701

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMG 287
               A  LL   +  G  P+ VT+  L++   K G
Sbjct: 702 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736


>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  261 bits (666), Expect = 5e-68
 Identities = 120/163 (73%), Positives = 139/163 (85%)
 Frame = +3

Query: 3    EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
            +M+FRGCPLD ITYNGL+K LC+ G +EKGL LFE+M  KG+ PNN+SCNILINGLCRTG
Sbjct: 554  DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 613

Query: 183  RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
             IQ ALE LRDMIH+GLTPDIVTYNSLINGLCK GR +EA NL DKLQVEG+ PD ITYN
Sbjct: 614  NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 673

Query: 363  TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            TL+SW+CK  MFDDAHLLL +GVD+G +PN  TW IL++NFI+
Sbjct: 674  TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/135 (42%), Positives = 83/135 (61%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM  +GC  +VITY  L+   CKEG +E+   + +EM  KG+A N V  N LI+ LC+  
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           ++Q AL +  DM  +G  PDI T+NSLI GLCK+ +  EA  L   + +EGV+ +TITYN
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533

Query: 363 TLMSWYCKASMFDDA 407
           TL+  + +     +A
Sbjct: 534 TLIHAFLRRGAMQEA 548



 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/170 (37%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM+ +G    V T+  ++K LC    V+    L ++M R G  PN +    LI+ L + G
Sbjct: 207 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVG 266

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           R+   L+LL +M+  G  PD+ T+N  I+GLCKM RI EA  L+D++ + G  P++ TY 
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFI-RHYVDES 509
            LM   C+    D+A +LL K V N   PNV  +  LIN ++ R  +DE+
Sbjct: 327 VLMHGLCRMGKVDEARMLLNK-VPN---PNVVLFNTLINGYVSRGRLDEA 372



 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/162 (35%), Positives = 94/162 (58%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGR 185
           M+  GC  D+ TYN L+  LCK+G +     L  EM+ KG  PN ++  ILI+  C+ GR
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439

Query: 186 IQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNT 365
           ++ A  +L +M  +GL  + V YN LI+ LCK  ++++A N+   +  +G  PD  T+N+
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499

Query: 366 LMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           L+   CK + F++A  L    +  G++ N  T+  LI+ F+R
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 541



 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/163 (34%), Positives = 89/163 (54%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM  +G  L+ + YN L+  LCK+  V+  L +F +M  KG  P+  + N LI GLC+  
Sbjct: 449 EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVN 508

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           + + AL L +DM+ +G+  + +TYN+LI+   + G ++EA  L++ +   G   D ITYN
Sbjct: 509 KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 568

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            L+   C+A   +    L    +  G+ PN  +  ILIN   R
Sbjct: 569 GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 611



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGR 185
           M+ RG   +  TY  L+  LC+ G V++   L  ++      PN V  N LING    GR
Sbjct: 313 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGR 368

Query: 186 IQMALELLRD-MIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           +  A  ++ + M+  G  PDI TYN+LI GLCK G +  A  L++++Q++G  P+ ITY 
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILIN 479
            L+  +CK    ++A  +L +    G+  N   +  LI+
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 467



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
 Frame = +3

Query: 30  DVITYNGLLKELCKEGAVEKGLGLFEE-MRRKGVAPNNVSCNILINGLCRTGRIQMALEL 206
           +V+ +N L+      G +++   +  E M   G  P+  + N LI GLC+ G +  A EL
Sbjct: 352 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411

Query: 207 LRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNTLMSWYCK 386
           + +M  +G  P+++TY  LI+  CK GR+ EA N+LD++  +G+  + + YN L+S  CK
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471

Query: 387 ASMFDDAHLLLCKGVDNGIVPNVRTWEILI 476
                DA  +       G  P++ T+  LI
Sbjct: 472 DEKVQDALNMFGDMSSKGCKPDIFTFNSLI 501



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/95 (33%), Positives = 55/95 (57%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M+ RG   D++TYN L+  LCK G  ++ L LF++++ +G+ P+ ++ N LI+  C+ G
Sbjct: 624 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 683

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMG 287
               A  LL   +  G  P+ VT+  L++   K G
Sbjct: 684 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718


>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score =  247 bits (630), Expect = 8e-64
 Identities = 113/169 (66%), Positives = 138/169 (81%)
 Frame = +3

Query: 3    EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
            +M+FRGCPLD ITYNGL+K  CK GA EK LGLF+EM RK + P+N+SCN+LINGLCR G
Sbjct: 545  DMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVG 604

Query: 183  RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
            ++  ALELLRDMIH+GL PD+VTYNSLINGLCKMG IREA NL +KLQ EG+ PD ITYN
Sbjct: 605  KVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYN 664

Query: 363  TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIRHYVDES 509
            TL+ W+C+A MFDDA+LLL +GV+N  +PN  TW IL++NFI+    E+
Sbjct: 665  TLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKEN 713



 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/163 (38%), Positives = 91/163 (55%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM  +G  L+++ YN LL+ LCK G V K L +  EM  KG  P+  + N LI GLC+  
Sbjct: 440 EMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVD 499

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           R + AL L RDM+  G+  + VTYN+LI+   + G I+EA  L++ +   G   D ITYN
Sbjct: 500 RKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYN 559

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            L+  +CK    + A  L  + V   +VP+  +  +LIN   R
Sbjct: 560 GLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCR 602



 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/163 (34%), Positives = 88/163 (53%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM+ +G    V T+  ++K LC    V+    L  +M + G  PN+V    LI+ L +  
Sbjct: 198 EMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRD 257

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           R+  AL+LL +M   G  PD+ T+N +I GLC++ RI E   L+D++   G  P+ ITY 
Sbjct: 258 RVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYG 317

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            LM+  C+    D+A +LL K       PN   + ILIN +++
Sbjct: 318 VLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVK 356



 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/163 (31%), Positives = 93/163 (57%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M+  GC  DV T+N L+  LCK+G +   + +  +M   G  PN ++   L++G C+  
Sbjct: 370 KMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKN 429

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           +++ A  +L +M  +G   +I+ YN L+  LCK G++ +A ++L ++  +G  PD  T+N
Sbjct: 430 QLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFN 489

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           TL+   CK    +DA  L    + +G++ N  T+  LI+ F+R
Sbjct: 490 TLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLR 532



 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/163 (33%), Positives = 91/163 (55%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M   GC  ++ITY  LL   CK+  +E+   +  EM  KG   N +  N+L+  LC+ G
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           ++  AL++L +M  +G  PDI T+N+LI GLCK+ R  +A  L   + ++GV+ +T+TYN
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYN 524

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           TL+  + +     +A  L+   +  G   +  T+  LI  F +
Sbjct: 525 TLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCK 567



 Score =  101 bits (251), Expect = 7e-20
 Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EM   GC  DV T+N ++  LC+   + +G  L + M  +G  PN+++  +L+NGLCR G
Sbjct: 268 EMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVG 327

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLL-DKLQVEGVVPDTITY 359
           ++  A  LL  +     TP+ V +  LING  K GR+ EA   L DK+   G  PD  T+
Sbjct: 328 KVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTF 383

Query: 360 NTLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           NTL+   CK  +   A  ++     NG  PN+ T+  L++ F +
Sbjct: 384 NTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCK 427



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 32/189 (16%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAV--------------------------------EK 89
           M+FRG   + ITY  L+  LC+ G V                                E 
Sbjct: 304 MLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEA 363

Query: 90  GLGLFEEMRRKGVAPNNVSCNILINGLCRTGRIQMALELLRDMIHQGLTPDIVTYNSLIN 269
              L+++M + G  P+  + N LI+GLC+ G +  A++++ DM   G TP+++TY +L++
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLD 423

Query: 270 GLCKMGRIREATNLLDKLQVEGVVPDTITYNTLMSWYCKASMFDDAHLLLCKGVDNGIVP 449
           G CK  ++ EA  +L+++  +G   + + YN L+   CK      A  +L +  D G  P
Sbjct: 424 GFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKP 483

Query: 450 NVRTWEILI 476
           ++ T+  LI
Sbjct: 484 DIFTFNTLI 492



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/151 (30%), Positives = 75/151 (49%)
 Frame = +3

Query: 39  TYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGRIQMALELLRDM 218
           +YN +L  L           +F EM  KGV P   +  +++  LC    +  A  LLRDM
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM 234

Query: 219 IHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNTLMSWYCKASMF 398
              G  P+ V Y +LI+ L K  R+ EA  LL+++ + G +PD  T+N ++   C+ +  
Sbjct: 235 TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRI 294

Query: 399 DDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            +   L+ + +  G  PN  T+ +L+N   R
Sbjct: 295 HEGAKLVDRMLFRGFTPNDITYGVLMNGLCR 325


>ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Glycine max]
          Length = 725

 Score =  238 bits (608), Expect = 3e-61
 Identities = 113/163 (69%), Positives = 135/163 (82%)
 Frame = +3

Query: 3    EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
            EM+FRGCPLD ITYNGL+K LCK GAVEKGLGLFEEM  KG+ P  +SCNILI+GLCRTG
Sbjct: 542  EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTG 601

Query: 183  RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
            ++  AL+ L+DMIH+GLTPDIVTYNSLINGLCKMG ++EA+NL +KLQ EG+ PD ITYN
Sbjct: 602  KVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYN 661

Query: 363  TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
            TL+S +C   MF+DA LLL KGVD+G +PN  TW ILIN  ++
Sbjct: 662  TLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  112 bits (281), Expect = 2e-23
 Identities = 62/166 (37%), Positives = 87/166 (52%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M+ RG    V T+  ++K LC    V+    L  +M + G  PN+V    LI+ LC   
Sbjct: 195 DMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENN 254

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           R+  AL+LL DM      PD+ T+N +I+GLC+ GRI EA  LLD++ + G   D +TY 
Sbjct: 255 RVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYG 314

Query: 363 TLMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIRHYV 500
            LM   C+    D+A  LL K      +PN  T  +L N  I  YV
Sbjct: 315 YLMHGLCRMGQVDEARALLNK------IPNPNT--VLYNTLISGYV 352



 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/139 (40%), Positives = 82/139 (58%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           EMV +    +VITY  L+   CK+G +E+   +   M  KG++ N V  N LI  LC+ G
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
            I+ AL+L  +M  +G  PDI T+NSLINGLCK  ++ EA +L   + +EGV+ +T+TYN
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYN 521

Query: 363 TLMSWYCKASMFDDAHLLL 419
           TL+  +        A  L+
Sbjct: 522 TLVHAFLMRDSIQQAFKLV 540



 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/162 (35%), Positives = 89/162 (54%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGR 185
           M  +G  L+ + YN L+  LCK+G +E+ L LF EM  KG  P+  + N LINGLC+  +
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497

Query: 186 IQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNT 365
           ++ AL L  DM  +G+  + VTYN+L++       I++A  L+D++   G   D ITYN 
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNG 557

Query: 366 LMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFIR 491
           L+   CK    +    L  + +  GI P + +  ILI+   R
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCR 599



 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/161 (35%), Positives = 87/161 (54%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTGR 185
           MV  G   D  T+N ++  L K+G +   L L  EM  K   PN ++  ILING C+ GR
Sbjct: 368 MVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGR 427

Query: 186 IQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYNT 365
           ++ A E++  M  +GL+ + V YN LI  LCK G I EA  L  ++  +G  PD  T+N+
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487

Query: 366 LMSWYCKASMFDDAHLLLCKGVDNGIVPNVRTWEILINNFI 488
           L++  CK    ++A  L       G++ N  T+  L++ F+
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFL 528



 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/164 (35%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   EMVFRGCPLDVITYNGLLKELCKEGAVEKGLGLFEEMRRKGVAPNNVSCNILINGLCRTG 182
           +M   GC  + + Y  L+  LC+   V + L L E+M      P+  + N +I+GLCR G
Sbjct: 230 DMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAG 289

Query: 183 RIQMALELLRDMIHQGLTPDIVTYNSLINGLCKMGRIREATNLLDKLQVEGVVPDTITYN 362
           RI  A +LL  M+ +G + D +TY  L++GLC+MG++ EA  LL+K+      P+T+ YN
Sbjct: 290 RIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYN 345

Query: 363 TLMSWYCKASMFDDAHLLLCKG-VDNGIVPNVRTWEILINNFIR 491
           TL+S Y  +  F++A  LL    V  G  P+  T+ I+I+  ++
Sbjct: 346 TLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 32/196 (16%)
 Frame = +3

Query: 6   MVFRGCPLDVITYNGLLKELCKEGAVEKGLGL------------------------FEEM 113
           M+ RG   D +TY  L+  LC+ G V++   L                        FEE 
Sbjct: 301 MLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEA 360

Query: 114 RR--------KGVAPNNVSCNILINGLCRTGRIQMALELLRDMIHQGLTPDIVTYNSLIN 269
           +          G  P+  + NI+I+GL + G +  ALELL +M+ +   P+++TY  LIN
Sbjct: 361 KDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILIN 420

Query: 270 GLCKMGRIREATNLLDKLQVEGVVPDTITYNTLMSWYCKASMFDDAHLLLCKGVDNGIVP 449
           G CK GR+ EA  +++ +  +G+  +T+ YN L+   CK    ++A  L  +    G  P
Sbjct: 421 GFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKP 480

Query: 450 NVRTWEILINNFIRHY 497
           ++ T+  LIN   +++
Sbjct: 481 DIYTFNSLINGLCKNH 496