BLASTX nr result

ID: Cimicifuga21_contig00023494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023494
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_003581592.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    63   3e-08
ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...    63   3e-08
emb|CBI33855.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002447026.1| hypothetical protein SORBIDRAFT_06g027130 [S...    62   5e-08

>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/94 (40%), Positives = 50/94 (53%)
 Frame = +3

Query: 3   EEQIRINNXXXXXXXXXXXXIYGDNLTILGRQEGQKSFQVHVHIEFPDELAVSTMLLYSS 182
           EEQ+RIN+            IYGDN  IL RQ G +SFQ+H+HIE P E  V+  L    
Sbjct: 140 EEQLRINDQLQEDELLAMESIYGDNTFILERQRGLRSFQIHIHIEVPAEFTVTAKLYSLG 199

Query: 183 NENFEFGTTSTTPKPAEDRSNEGFLYSFKVQHLP 284
           + N + G            S++ F YSF+VQ+LP
Sbjct: 200 DCNGKSG------------SSDEFSYSFEVQYLP 221


>ref|XP_003581592.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Brachypodium
           distachyon]
          Length = 633

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/94 (39%), Positives = 49/94 (52%)
 Frame = +3

Query: 3   EEQIRINNXXXXXXXXXXXXIYGDNLTILGRQEGQKSFQVHVHIEFPDELAVSTMLLYSS 182
           EE+ R N+            I+GD + I  R EGQ+SFQVHVHIE PD   VS  L Y +
Sbjct: 121 EEEARANDQRQEDEICALEAIFGDTVVIFNRNEGQRSFQVHVHIEIPDGTDVSVRLSYGA 180

Query: 183 NENFEFGTTSTTPKPAEDRSNEGFLYSFKVQHLP 284
                 GT +       D S++  +Y F+V+HLP
Sbjct: 181 ------GTLNYKGIRDGDASDD-LVYKFRVEHLP 207


>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/94 (38%), Positives = 50/94 (53%)
 Frame = +3

Query: 3   EEQIRINNXXXXXXXXXXXXIYGDNLTILGRQEGQKSFQVHVHIEFPDELAVSTMLLYSS 182
           E+++RIN             IYGDN+ IL RQ+G +SFQ+HVHIE   EL V+  L    
Sbjct: 358 EDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIHVHIEALGELTVTAKL---- 413

Query: 183 NENFEFGTTSTTPKPAEDRSNEGFLYSFKVQHLP 284
                    S++ +  E   ++ F YSF VQ+LP
Sbjct: 414 --------NSSSGRTTESDGSDDFSYSFNVQYLP 439


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/94 (38%), Positives = 50/94 (53%)
 Frame = +3

Query: 3   EEQIRINNXXXXXXXXXXXXIYGDNLTILGRQEGQKSFQVHVHIEFPDELAVSTMLLYSS 182
           E+++RIN             IYGDN+ IL RQ+G +SFQ+HVHIE   EL V+  L    
Sbjct: 152 EDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIHVHIEALGELTVTAKL---- 207

Query: 183 NENFEFGTTSTTPKPAEDRSNEGFLYSFKVQHLP 284
                    S++ +  E   ++ F YSF VQ+LP
Sbjct: 208 --------NSSSGRTTESDGSDDFSYSFNVQYLP 233


>ref|XP_002447026.1| hypothetical protein SORBIDRAFT_06g027130 [Sorghum bicolor]
           gi|241938209|gb|EES11354.1| hypothetical protein
           SORBIDRAFT_06g027130 [Sorghum bicolor]
          Length = 649

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/94 (37%), Positives = 48/94 (51%)
 Frame = +3

Query: 3   EEQIRINNXXXXXXXXXXXXIYGDNLTILGRQEGQKSFQVHVHIEFPDELAVSTMLLYSS 182
           EE++R N+            I+GD + IL R+ GQ+SFQV VHIE PD + VST L Y  
Sbjct: 136 EEEVRANDQRQEDEICALEAIFGDAVVILDRKGGQRSFQVLVHIEIPDSIDVSTKLNYGD 195

Query: 183 NENFEFGTTSTTPKPAEDRSNEGFLYSFKVQHLP 284
                +G T           ++   Y F+V+HLP
Sbjct: 196 G-TLNYGATCD--------DDDDLFYKFRVEHLP 220


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