BLASTX nr result

ID: Cimicifuga21_contig00023473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023473
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281445.2| PREDICTED: probable beta-1,4-xylosyltransfer...    70   5e-10
ref|XP_002324807.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09
ref|XP_002516557.1| beta-1,3-glucuronyltransferase, putative [Ri...    64   2e-08
ref|XP_002309550.1| glycosyl transferase [Populus trichocarpa] g...    60   3e-07

>ref|XP_002281445.2| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Vitis
           vinifera] gi|296081866|emb|CBI20871.3| unnamed protein
           product [Vitis vinifera]
          Length = 448

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 38/68 (55%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -2

Query: 201 MASIRRTLSPVPRSGAIRNAETHSVPSPLSK-SSHTQNHLQSGGILSPVLGSMDSHPVLY 25
           MASIRRTLSP PR   + N E  SVPSPLSK SS TQN+   G +LSP   S DS    Y
Sbjct: 1   MASIRRTLSPAPRDRTLLNGEACSVPSPLSKSSSSTQNYSPEGRLLSPSFSSSDSRLAWY 60

Query: 24  KIQTVVLG 1
           +IQ  ++G
Sbjct: 61  RIQAFIIG 68


>ref|XP_002324807.1| predicted protein [Populus trichocarpa] gi|222866241|gb|EEF03372.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = -2

Query: 201 MASIRRTLSPVPRSGAIRNAETHSVPSPLSKSSHTQNHLQSGGILSPVLGSMDSHPVLYK 22
           MASIRRTLSPVPR+G + N E   V SPLSKSS++Q++  SGG+L  + G  DS   +Y 
Sbjct: 1   MASIRRTLSPVPRAGTLLNGEACQVASPLSKSSYSQSYPSSGGLLPSIFGPSDSQAFVYG 60

Query: 21  I 19
           +
Sbjct: 61  V 61


>ref|XP_002516557.1| beta-1,3-glucuronyltransferase, putative [Ricinus communis]
           gi|223544377|gb|EEF45898.1|
           beta-1,3-glucuronyltransferase, putative [Ricinus
           communis]
          Length = 438

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/62 (59%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = -2

Query: 201 MASIRRTLSPVPRSGAIRNAETHSVPSPLSKSSHT-QNHLQSGGILSPVLGSMDSHPVLY 25
           MASIRRTLSPVPR+GA+ N E   VPSPLSKSS + QN   S G LS +LG  DS   + 
Sbjct: 1   MASIRRTLSPVPRAGALMNGEVCQVPSPLSKSSSSAQNFSTSRGFLSSLLGLTDSQAFIL 60

Query: 24  KI 19
            I
Sbjct: 61  GI 62


>ref|XP_002309550.1| glycosyl transferase [Populus trichocarpa]
           gi|222855526|gb|EEE93073.1| glycosyl transferase
           [Populus trichocarpa]
          Length = 442

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = -2

Query: 201 MASIRRTLSPVPRSGAIRNAETHSVPSPLSK--SSHTQNHLQSGGILSPVLGSMDSHPVL 28
           MASIRRTLSPVPR+G + N E   V SPLSK  SS++Q++  SGG LS + G  D     
Sbjct: 1   MASIRRTLSPVPRAGTLLNGEACQVASPLSKSSSSYSQSYPTSGGFLSSIFGLSDVQAFA 60

Query: 27  YKI 19
           Y +
Sbjct: 61  YGV 63


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