BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023468
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26162.3| unnamed protein product [Vitis vinifera]              162   1e-48
ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containi...   147   5e-44
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-42
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-42
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...   129   6e-39

>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  162 bits (411), Expect(2) = 1e-48
 Identities = 81/163 (49%), Positives = 105/163 (64%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           LWFE++ KGFLPNEYTYN +I GY+K GN EEAWK+++EM D+G    T +YN MI GLC
Sbjct: 389 LWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLC 448

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
            H  + +A  LFEEM    I  N IT+N L+ GFCK  K  +     ++LL  G+QPSA 
Sbjct: 449 SHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAA 508

Query: 363 SYTPLIKNLCCASQVQRATALWNEMLRRDLEPSVRSCDHPTVV 491
           SY PLI  LC    +Q A  LW++M  R +EP+V  C H  ++
Sbjct: 509 SYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAV--CTHDFMI 549



 Score = 58.2 bits (139), Expect(2) = 1e-48
 Identities = 31/71 (43%), Positives = 42/71 (59%)
 Frame = +1

Query: 493 KRGNVTEGTNWLATMLQKKLIPSKTTFNKIIKYLLSENMLDDVLPVLHSMFGVGIMLNRS 672
           K+G   EG  WL TML+ KL P K +F  +I+ L   + LDD L VL SM  +G  L+ S
Sbjct: 554 KQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSIS 613

Query: 673 DLYNLVRRLCK 705
              +LV +LC+
Sbjct: 614 ICNSLVTKLCE 624



 Score = 84.3 bits (207), Expect(2) = 3e-17
 Identities = 44/150 (29%), Positives = 79/150 (52%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           L   ++ +   P+ +TY  +++G  K G   E ++++K+++DRG  P    Y TMI GLC
Sbjct: 319 LLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLC 378

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
             + +  A  L+ EM +    PN  T+N +I+G+ K+   ++A   Y ++   G      
Sbjct: 379 RMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTV 438

Query: 363 SYTPLIKNLCCASQVQRATALWNEMLRRDL 452
           SY  +IK LC   +++ A  L+ EM  + +
Sbjct: 439 SYNVMIKGLCSHGKIKEAHDLFEEMSHKGI 468



 Score = 31.2 bits (69), Expect(2) = 3e-17
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 454 NHLFVHVIILQLFKRGNVTEGTNWLATMLQKKLIPSKTTFNKIIKYLLSE 603
           NH+  + ++    K G + EG N L  +L + + PS  ++  +I  L  E
Sbjct: 471 NHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQE 520



 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           L+ E+  KG L N  TYN L+ G+ K G   E   L  E+ D+G++P+  +Y  +I  LC
Sbjct: 459 LFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLC 518

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
              +M  A  L+++M    ++P V T + +I GFCK     + M +   +L + L+P   
Sbjct: 519 QEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKK 578

Query: 363 SYTPLIKNLCCASQVQR---ATALWNEMLRRDLEPSVRSCD 476
           S+  LI+   C SQ+ R   A  + + ML+     S+  C+
Sbjct: 579 SFESLIQ---CLSQIDRLDDALLVLDSMLKIGFRLSISICN 616



 Score = 62.8 bits (151), Expect(2) = 1e-11
 Identities = 35/153 (22%), Positives = 65/153 (42%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           L+ E++    + + +T   L+  +       +   L + + + G+ P    +N +I G C
Sbjct: 249 LYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFC 308

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
             +   +   L   M      P++ T+  ++NG CK  KG +    +  L   G  P   
Sbjct: 309 KDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRV 368

Query: 363 SYTPLIKNLCCASQVQRATALWNEMLRRDLEPS 461
            YT +I  LC    +  A  LW EM+++   P+
Sbjct: 369 MYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPN 401



 Score = 33.5 bits (75), Expect(2) = 1e-11
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
 Frame = +1

Query: 454 NHLFVHVIILQLFKRGNVTEGTNWLATMLQKKLIPSKTTFNKIIKYLLSENMLDDVLPVL 633
           N    + +I   FK GN+ E       M  K       ++N +IK L S   + +   + 
Sbjct: 401 NEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLF 460

Query: 634 HSMFGVGIMLNRSDLYNLVRRLCK-GKPDRGRARLKGILQR 753
             M   GI+ N      LVR  CK GK   G   L  +L +
Sbjct: 461 EEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQ 501



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 34/130 (26%), Positives = 63/130 (48%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           L +ELL +G  P+  +Y  LID   + G+ + A  LW +M++RG++P    ++ MI G C
Sbjct: 494 LLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFC 553

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
                 +       M + +++P   +F +LI    ++ +   A++    +L  G + S  
Sbjct: 554 KQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSIS 613

Query: 363 SYTPLIKNLC 392
               L+  LC
Sbjct: 614 ICNSLVTKLC 623


>ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Glycine max]
          Length = 577

 Score =  147 bits (372), Expect(2) = 5e-44
 Identities = 77/153 (50%), Positives = 100/153 (65%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           LWFE++ KGF PNEYTYNV++ GY K G+  EA K++++MRDRG   TT +Y TMI GLC
Sbjct: 340 LWFEMIKKGFQPNEYTYNVMMHGYCKIGDLAEARKIFEDMRDRGYAETTVSYGTMISGLC 399

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
           LH    +A +LFEEM +  I P++IT+N LI   CK  K  KA    + LLA GL+ S  
Sbjct: 400 LHGRTDEAQSLFEEMFQKGIVPDLITYNCLIKALCKEVKIVKARKLLNLLLAQGLELSVF 459

Query: 363 SYTPLIKNLCCASQVQRATALWNEMLRRDLEPS 461
           S++PLIK LC     + A  LW +M  R LEP+
Sbjct: 460 SFSPLIKQLCIVGNTKGAITLWKDMHDRLLEPT 492



 Score = 57.4 bits (137), Expect(2) = 5e-44
 Identities = 32/81 (39%), Positives = 43/81 (53%)
 Frame = +1

Query: 514 GTNWLATMLQKKLIPSKTTFNKIIKYLLSENMLDDVLPVLHSMFGVGIMLNRSDLYNLVR 693
           G  WL  ML  K  P K TF  +I  L  EN LDD+L VL  MF +G +L +  +Y+LV 
Sbjct: 497 GIEWLLNMLSWKQKPQKQTFEYLINSLSQENRLDDILVVLDFMFRIGYILEKGTIYSLVS 556

Query: 694 RLCKGKPDRGRARLKGILQRN 756
           +  +         L+ IL+RN
Sbjct: 557 KFSRDNFHFPDLCLEKILERN 577



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 46/153 (30%), Positives = 78/153 (50%)
 Frame = +3

Query: 12  ELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHR 191
           +L  +G+ P+   Y  +I G  +     EA KLW EM  +G +P  + YN M+ G C   
Sbjct: 308 DLKDRGYFPDRVMYTTVIKGLCEMQRLGEARKLWFEMIKKGFQPNEYTYNVMMHGYCKIG 367

Query: 192 NMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYT 371
           ++ +A  +FE+M         +++ T+I+G C   +  +A   + ++   G+ P   +Y 
Sbjct: 368 DLAEARKIFEDMRDRGYAETTVSYGTMISGLCLHGRTDEAQSLFEEMFQKGIVPDLITYN 427

Query: 372 PLIKNLCCASQVQRATALWNEMLRRDLEPSVRS 470
            LIK LC   ++ +A  L N +L + LE SV S
Sbjct: 428 CLIKALCKEVKIVKARKLLNLLLAQGLELSVFS 460



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 44/150 (29%), Positives = 79/150 (52%)
 Frame = +3

Query: 15  LLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRN 194
           ++ K   P+  TY  +I G  K  NSE  ++++ +++DRG  P    Y T+I GLC  + 
Sbjct: 275 MIAKQCNPDVSTYQEIIYGLLKMKNSE-GFQVFNDLKDRGYFPDRVMYTTVIKGLCEMQR 333

Query: 195 MYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTP 374
           + +A  L+ EM K   +PN  T+N +++G+CK+    +A   +  +   G   +  SY  
Sbjct: 334 LGEARKLWFEMIKKGFQPNEYTYNVMMHGYCKIGDLAEARKIFEDMRDRGYAETTVSYGT 393

Query: 375 LIKNLCCASQVQRATALWNEMLRRDLEPSV 464
           +I  LC   +   A +L+ EM ++ + P +
Sbjct: 394 MISGLCLHGRTDEAQSLFEEMFQKGIVPDL 423



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 38/141 (26%), Positives = 64/141 (45%)
 Frame = +3

Query: 39  NEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRNMYKACALF 218
           N  T   LI  +       + ++L KE+ + GL P    +N +I G C      +   + 
Sbjct: 213 NVETVGYLIMAFCAEYKVLKGYELLKELLENGLCPDNVVFNELIRGFCKEGQYDRVSEIL 272

Query: 219 EEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTPLIKNLCCA 398
             M   +  P+V T+  +I G  K++  +   VF + L   G  P    YT +IK LC  
Sbjct: 273 HIMIAKQCNPDVSTYQEIIYGLLKMKNSEGFQVF-NDLKDRGYFPDRVMYTTVIKGLCEM 331

Query: 399 SQVQRATALWNEMLRRDLEPS 461
            ++  A  LW EM+++  +P+
Sbjct: 332 QRLGEARKLWFEMIKKGFQPN 352


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  159 bits (403), Expect(2) = 2e-42
 Identities = 82/159 (51%), Positives = 103/159 (64%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           LWFE++ KGFLPNEY+YN LI G+ K GN +EA KL+K+M D G K TT + NT+ILGLC
Sbjct: 390 LWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLC 449

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
           LH    +A   F EMP   I  +VIT+NTLI GFC+  K  ++     +L A GLQPS  
Sbjct: 450 LHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTS 509

Query: 363 SYTPLIKNLCCASQVQRATALWNEMLRRDLEPSVRSCDH 479
           SY  LI+ LC    VQ A  +WN+M  R L+P V + DH
Sbjct: 510 SYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDH 548



 Score = 40.0 bits (92), Expect(2) = 2e-42
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 475 IILQLFKRGNVTEGTNWLATMLQKKLIPSKTTFNKIIKYLL 597
           II  L ++G V EG  WL TML+  L P K TF K+I+ L+
Sbjct: 549 IISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLI 589



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 45/141 (31%), Positives = 73/141 (51%)
 Frame = +3

Query: 15  LLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRN 194
           ++ K   P+ +TY  +I+G+ K   + +A++++  ++DRG  P    Y T+I G C    
Sbjct: 324 MIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQ 383

Query: 195 MYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTP 374
           +  A  L+ EM      PN  ++NTLI GFCK+    +AM  Y K+L +G + +  S   
Sbjct: 384 LEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNT 443

Query: 375 LIKNLCCASQVQRATALWNEM 437
           LI  LC   +   A   + EM
Sbjct: 444 LILGLCLHGRTDEAYDFFREM 464



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 38/138 (27%), Positives = 63/138 (45%)
 Frame = +3

Query: 48  TYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRNMYKACALFEEM 227
           T   LI  +        A+++ ++  + GL P    +N +I G C  +N ++   L   M
Sbjct: 265 TVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTM 324

Query: 228 PKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTPLIKNLCCASQV 407
                 P++ T+  +INGFCK     +A   ++ L   G  P    YT LI   C   Q+
Sbjct: 325 IVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQL 384

Query: 408 QRATALWNEMLRRDLEPS 461
           + A+ LW EM+ +   P+
Sbjct: 385 EDASKLWFEMIDKGFLPN 402



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 40/150 (26%), Positives = 68/150 (45%)
 Frame = +3

Query: 27  GFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRNMYKA 206
           G  P    +N LI G+ K  N     +L   M  +   P  F Y  +I G C +    +A
Sbjct: 293 GLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQA 352

Query: 207 CALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTPLIKN 386
             +F  +      P+++ + TLI+GFCK+ + + A   + +++  G  P+  SY  LI  
Sbjct: 353 FEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYG 412

Query: 387 LCCASQVQRATALWNEMLRRDLEPSVRSCD 476
            C    +  A  L+ +ML    + +  SC+
Sbjct: 413 FCKIGNLDEAMKLYKKMLDSGYKETTLSCN 442



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 36/126 (28%), Positives = 72/126 (57%)
 Frame = +3

Query: 12  ELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHR 191
           E+ CK  + +  TYN LI G+ + G   ++  L KE++ +GL+P+T +Y  +I  LC   
Sbjct: 463 EMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLG 522

Query: 192 NMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYT 371
           ++ +A  ++ +M    ++P V T + +I+G C+     + M +   +L + L+P  +++ 
Sbjct: 523 SVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFY 582

Query: 372 PLIKNL 389
            LI++L
Sbjct: 583 KLIQSL 588


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  159 bits (403), Expect(2) = 2e-42
 Identities = 82/159 (51%), Positives = 103/159 (64%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           LWFE++ KGFLPNEY+YN LI G+ K GN +EA KL+K+M D G K TT + NT+ILGLC
Sbjct: 354 LWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLC 413

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
           LH    +A   F EMP   I  +VIT+NTLI GFC+  K  ++     +L A GLQPS  
Sbjct: 414 LHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTS 473

Query: 363 SYTPLIKNLCCASQVQRATALWNEMLRRDLEPSVRSCDH 479
           SY  LI+ LC    VQ A  +WN+M  R L+P V + DH
Sbjct: 474 SYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDH 512



 Score = 40.0 bits (92), Expect(2) = 2e-42
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 475 IILQLFKRGNVTEGTNWLATMLQKKLIPSKTTFNKIIKYLL 597
           II  L ++G V EG  WL TML+  L P K TF K+I+ L+
Sbjct: 513 IISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLI 553



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 45/141 (31%), Positives = 73/141 (51%)
 Frame = +3

Query: 15  LLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRN 194
           ++ K   P+ +TY  +I+G+ K   + +A++++  ++DRG  P    Y T+I G C    
Sbjct: 288 MIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQ 347

Query: 195 MYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTP 374
           +  A  L+ EM      PN  ++NTLI GFCK+    +AM  Y K+L +G + +  S   
Sbjct: 348 LEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNT 407

Query: 375 LIKNLCCASQVQRATALWNEM 437
           LI  LC   +   A   + EM
Sbjct: 408 LILGLCLHGRTDEAYDFFREM 428



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 38/138 (27%), Positives = 63/138 (45%)
 Frame = +3

Query: 48  TYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRNMYKACALFEEM 227
           T   LI  +        A+++ ++  + GL P    +N +I G C  +N ++   L   M
Sbjct: 229 TVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTM 288

Query: 228 PKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTPLIKNLCCASQV 407
                 P++ T+  +INGFCK     +A   ++ L   G  P    YT LI   C   Q+
Sbjct: 289 IVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQL 348

Query: 408 QRATALWNEMLRRDLEPS 461
           + A+ LW EM+ +   P+
Sbjct: 349 EDASKLWFEMIDKGFLPN 366



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 40/150 (26%), Positives = 68/150 (45%)
 Frame = +3

Query: 27  GFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHRNMYKA 206
           G  P    +N LI G+ K  N     +L   M  +   P  F Y  +I G C +    +A
Sbjct: 257 GLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQA 316

Query: 207 CALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYTPLIKN 386
             +F  +      P+++ + TLI+GFCK+ + + A   + +++  G  P+  SY  LI  
Sbjct: 317 FEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYG 376

Query: 387 LCCASQVQRATALWNEMLRRDLEPSVRSCD 476
            C    +  A  L+ +ML    + +  SC+
Sbjct: 377 FCKIGNLDEAMKLYKKMLDSGYKETTLSCN 406



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 36/126 (28%), Positives = 72/126 (57%)
 Frame = +3

Query: 12  ELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHR 191
           E+ CK  + +  TYN LI G+ + G   ++  L KE++ +GL+P+T +Y  +I  LC   
Sbjct: 427 EMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLG 486

Query: 192 NMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYT 371
           ++ +A  ++ +M    ++P V T + +I+G C+     + M +   +L + L+P  +++ 
Sbjct: 487 SVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFY 546

Query: 372 PLIKNL 389
            LI++L
Sbjct: 547 KLIQSL 552


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  129 bits (325), Expect(2) = 6e-39
 Identities = 70/159 (44%), Positives = 96/159 (60%)
 Frame = +3

Query: 3   LWFELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLC 182
           LWFE++ KG +PNEYTYNV+I GY K  +  EA KL+ +M  RG      +Y+TMI GL 
Sbjct: 328 LWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLY 387

Query: 183 LHRNMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSAD 362
           LH    +A +LF EM +  I  ++I++N+LI G C+  +  KA    +KLL  GL+PS  
Sbjct: 388 LHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVS 447

Query: 363 SYTPLIKNLCCASQVQRATALWNEMLRRDLEPSVRSCDH 479
           S+TPLIK LC     + A  L  +M  R LEP   + D+
Sbjct: 448 SFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDY 486



 Score = 58.5 bits (140), Expect(2) = 6e-39
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = +1

Query: 475 IILQLFKRGNVTEGTNWLATMLQKKLIPSKTTFNKIIKYLLSENMLDDVLPVLHSMFGVG 654
           +I+ L K+G+  +G  WL  ML  KL P+  TF  +I  L  EN LDD+L VL  MF  G
Sbjct: 487 MIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREG 546

Query: 655 IMLNRSDLYNLVRRLCK 705
             L +S + +LV +  K
Sbjct: 547 YRLEKSRICSLVTKFSK 563



 Score =  100 bits (250), Expect = 5e-19
 Identities = 54/153 (35%), Positives = 85/153 (55%)
 Frame = +3

Query: 12  ELLCKGFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGLKPTTFNYNTMILGLCLHR 191
           +L  +G+ P+   Y  +I G+   G   EA KLW EM  +GL P  + YN MI G C  R
Sbjct: 296 DLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVR 355

Query: 192 NMYKACALFEEMPKMEIKPNVITFNTLINGFCKLRKGKKAMVFYHKLLATGLQPSADSYT 371
           +  +A  L+++M       NV++++T+I+G     K  +A+  +H++   G+     SY 
Sbjct: 356 DFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYN 415

Query: 372 PLIKNLCCASQVQRATALWNEMLRRDLEPSVRS 470
            LIK LC   ++ +AT L N++L + LEPSV S
Sbjct: 416 SLIKGLCQEGELAKATNLLNKLLIQGLEPSVSS 448



 Score = 67.4 bits (163), Expect(2) = 5e-10
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 37/182 (20%)
 Frame = +3

Query: 27  GFLPNEYTYNVLIDGYWKTGNSEEAWKLWKEMRDRGL------------------KPTTF 152
           GFLP+  ++NV +    K G ++  WKL++ M + G+                  +   F
Sbjct: 159 GFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVF 218

Query: 153 N-------------------YNTMILGLCLHRNMYKACALFEEMPKMEIKPNVITFNTLI 275
           N                   +N +I G C  +   +   +   M  M+  P++ T+  +I
Sbjct: 219 NGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEII 278

Query: 276 NGFCKLRKGKKAMVFYHKLLATGLQPSADSYTPLIKNLCCASQVQRATALWNEMLRRDLE 455
           NG  K RK  +A   ++ L   G  P    YT +IK  C    +  A  LW EM+++ L 
Sbjct: 279 NGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLV 338

Query: 456 PS 461
           P+
Sbjct: 339 PN 340



 Score = 23.5 bits (49), Expect(2) = 5e-10
 Identities = 17/84 (20%), Positives = 33/84 (39%)
 Frame = +1

Query: 454 NHLFVHVIILQLFKRGNVTEGTNWLATMLQKKLIPSKTTFNKIIKYLLSENMLDDVLPVL 633
           N    +V+I    K  +  E       M  +    +  +++ +I  L      D+ L + 
Sbjct: 340 NEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLF 399

Query: 634 HSMFGVGIMLNRSDLYNLVRRLCK 705
           H M   GI  +     +L++ LC+
Sbjct: 400 HEMSRKGIARDLISYNSLIKGLCQ 423