BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023461
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x h...    56   3e-06
ref|XP_002309792.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    55   6e-06

>dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x hybrida]
          Length = 402

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
 Frame = -3

Query: 390 NGALHWLTLRDRDSPDCRLLIVSFHLGVEEFSIFPTPKV-DYEAGYALELIELGVMEDHL 214
           NGA HW+T  + +    +L+I+ F +  E F    TP    + +G    L+   ++++ L
Sbjct: 237 NGAYHWITTLNHED---KLIILCFDMSTEIFRNINTPDTRQFSSGTCHSLV---LLDECL 290

Query: 213 SF---------VDPTGDFIRIWYMENDNGDKSWIEQFVIQKELISQRYIGSIVPIKLRKN 61
           SF         +DPT D I IW M++ N  +SW +++ I+   I +       P+ + K+
Sbjct: 291 SFMCHPYLGPEIDPTTDLIDIWMMKDYNVYESWTKKYTIRVLPIDES------PLAVWKD 344

Query: 60  GDLVLMGHSSCMVSYNINS 4
             L+  G S  ++SY+  S
Sbjct: 345 SLLIFQGKSGYLMSYDFKS 363


>ref|XP_002309792.1| predicted protein [Populus trichocarpa] gi|222852695|gb|EEE90242.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
 Frame = -3

Query: 396 FVNGALHWLTLRDRDSPDCRLLIVSFHLGVEEFSIF--PTPKVDYEAGYALELIELGVME 223
           FVNG+ HW+ +   D  D   +I  F+   E+F  F  P P +D+  GY  +  +LGV+ 
Sbjct: 225 FVNGSFHWI-IDINDDYDRTNIIYYFNFESEQFRTFLLPVPPIDHVYGYCYQYADLGVLG 283

Query: 222 DHL-----SFVDPTGDFIRIWYMENDNGDKSWIEQFVIQKEL 112
           D L     S++ P  D I +W M++   + SW E  VI+  +
Sbjct: 284 DSLYCSYFSYL-PCDDCINLWVMKDYGVEDSWAEILVIEHRM 324


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
 Frame = -3

Query: 396 FVNGALHWLTLRDRDSPDCRLLIVSFHLGVEEFSIFPTPKVDYEAGYALELIELGVMEDH 217
           F NGALHW+   + +S +   ++V+  LGVE++     P+   +  Y    I+LGV+   
Sbjct: 209 FANGALHWVVGENPES-NVANIVVALDLGVEDYREVLQPEYKDKNFY----IDLGVLRGC 263

Query: 216 LSFV-DPTGDFIRIWYMENDNGDKSWIEQF-VIQKELISQRYIGSIVPIKLRKNGDLVLM 43
           L F+ +  G+ + +W M+     +SW + F V Q E+I   ++ S+ P+   K+GD VL+
Sbjct: 264 LCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIG--FLRSLKPLAYSKSGDEVLI 321

Query: 42  GHSS 31
            H +
Sbjct: 322 EHDN 325