BLASTX nr result

ID: Cimicifuga21_contig00023460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023460
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...   197   2e-48
emb|CBI17411.3| unnamed protein product [Vitis vinifera]              197   2e-48
emb|CBI37995.3| unnamed protein product [Vitis vinifera]              192   7e-47
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...   183   3e-44
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   181   2e-43

>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Vitis vinifera]
          Length = 1643

 Score =  197 bits (501), Expect = 2e-48
 Identities = 115/260 (44%), Positives = 156/260 (60%), Gaps = 12/260 (4%)
 Frame = -2

Query: 798 RDTDQVDFNDRNSWNPLFKMYWIDLKRKLLFKPDELTRARIAFKGSAVKVGKEEPADQLD 619
           ++  QVDF+D++SW  LFK+YWI LK KL    +ELTRA+  +KG+ +   K E +D+L 
Sbjct: 220 KEMAQVDFDDKSSWEYLFKVYWIYLKGKLSLTLEELTRAKNPWKGAGLMARKGESSDELY 279

Query: 618 DANDDHVSNLGXXXXXXXXXXXXXXXXXXXXXXXIQVGSYNESRAGDDDGMSVLCNTEWA 439
           DANDD  S+                          +  S N  R+ D     +   TEWA
Sbjct: 280 DANDDKGSSSDSSSGHQEANTSKRRKTKKQPKFLNKDNSLNVGRSDDSKRTCLPEGTEWA 339

Query: 438 SKELLDFVANTRNGDTSVLSHFDVQGLLLEYITRNNLRDPHQKSRILCDSRLKNLFGKAS 259
           SKELL+ V + +NGDTSVLS FDVQ LLLEYI RNNLRDP +KS+I+CD RL+NLFGKA 
Sbjct: 340 SKELLELVGHMKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKAR 399

Query: 258 IGHFEMLRLLRSH-LVKMDTQ--DYIQARLLDTKPSQMEIRGSS--------ESSGKVRK 112
           +GHFEML+LL SH L+K  ++  D ++  ++DT  SQ++   ++        +   K RK
Sbjct: 400 VGHFEMLKLLESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRK 459

Query: 111 RND-TVPKTNQDDYATTVVH 55
           + D   P+TN D+YA   VH
Sbjct: 460 KGDERGPQTNLDEYAAIDVH 479


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score =  197 bits (501), Expect = 2e-48
 Identities = 115/260 (44%), Positives = 156/260 (60%), Gaps = 12/260 (4%)
 Frame = -2

Query: 798 RDTDQVDFNDRNSWNPLFKMYWIDLKRKLLFKPDELTRARIAFKGSAVKVGKEEPADQLD 619
           ++  QVDF+D++SW  LFK+YWI LK KL    +ELTRA+  +KG+ +   K E +D+L 
Sbjct: 220 KEMAQVDFDDKSSWEYLFKVYWIYLKGKLSLTLEELTRAKNPWKGAGLMARKGESSDELY 279

Query: 618 DANDDHVSNLGXXXXXXXXXXXXXXXXXXXXXXXIQVGSYNESRAGDDDGMSVLCNTEWA 439
           DANDD  S+                          +  S N  R+ D     +   TEWA
Sbjct: 280 DANDDKGSSSDSSSGHQEANTSKRRKTKKQPKFLNKDNSLNVGRSDDSKRTCLPEGTEWA 339

Query: 438 SKELLDFVANTRNGDTSVLSHFDVQGLLLEYITRNNLRDPHQKSRILCDSRLKNLFGKAS 259
           SKELL+ V + +NGDTSVLS FDVQ LLLEYI RNNLRDP +KS+I+CD RL+NLFGKA 
Sbjct: 340 SKELLELVGHMKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKAR 399

Query: 258 IGHFEMLRLLRSH-LVKMDTQ--DYIQARLLDTKPSQMEIRGSS--------ESSGKVRK 112
           +GHFEML+LL SH L+K  ++  D ++  ++DT  SQ++   ++        +   K RK
Sbjct: 400 VGHFEMLKLLESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRK 459

Query: 111 RND-TVPKTNQDDYATTVVH 55
           + D   P+TN D+YA   VH
Sbjct: 460 KGDERGPQTNLDEYAAIDVH 479


>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  192 bits (488), Expect = 7e-47
 Identities = 112/260 (43%), Positives = 156/260 (60%), Gaps = 12/260 (4%)
 Frame = -2

Query: 798  RDTDQVDFNDRNSWNPLFKMYWIDLKRKLLFKPDELTRARIAFKGSAVKVGKEEPADQLD 619
            ++ DQVDF+D++SW  LFK YWIDLK +L    DEL +A+  +KGS    GK+E  D+ +
Sbjct: 225  KEMDQVDFDDKSSWEFLFKDYWIDLKGRLSLTSDELAQAKNPWKGSDAPAGKQEAPDEPN 284

Query: 618  DA-NDDHVSNLGXXXXXXXXXXXXXXXXXXXXXXXIQVGSYNESRAGDDDGMSVLCNTEW 442
            D  ND    +                          +  S + + A   +G S   NTEW
Sbjct: 285  DVYNDGGPGSDSSSGNVEARKPKRRKAKKRLKSLNKERDSPSVATAIGAEGTSTPANTEW 344

Query: 441  ASKELLDFVANTRNGDTSVLSHFDVQGLLLEYITRNNLRDPHQKSRILCDSRLKNLFGKA 262
            ASKELL+FV + +NGD SV S FDVQ LLLEYI RN LRDP +KS+I+CDSRL+ LFGK 
Sbjct: 345  ASKELLEFVMHMKNGDKSVTSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLEYLFGKP 404

Query: 261  SIGHFEMLRLLRSH-LVKMDTQ-DYIQARLLDTKPSQMEIRGSSESSGKV---------R 115
             +GHFEML+LL SH L K D+Q D +Q  ++D++ SQ+E+ G++++  KV         +
Sbjct: 405  RVGHFEMLKLLESHFLNKEDSQTDDLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARK 464

Query: 114  KRNDTVPKTNQDDYATTVVH 55
            K ++   ++N DDYA   +H
Sbjct: 465  KGDERGSQSNLDDYAAIDIH 484


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score =  183 bits (465), Expect = 3e-44
 Identities = 108/258 (41%), Positives = 149/258 (57%), Gaps = 10/258 (3%)
 Frame = -2

Query: 798  RDTDQVDFNDRNSWNPLFKMYWIDLKRKLLFKPDELTRARIAFKGSAVKVGKEEPADQLD 619
            ++  Q+DFND+NSW  LFK YW DLK  L    DEL  A+  +KGS     + +   +L 
Sbjct: 295  KEKGQIDFNDKNSWEYLFKEYWTDLKGSLSLTFDELVHAKNPWKGSETLTSRPDSPGELC 354

Query: 618  DANDDHVSNLGXXXXXXXXXXXXXXXXXXXXXXXIQVGSYNESRAGDDDGMSVLCNTEWA 439
            D N D  S+L                         ++ S +   A    G+S   N EW 
Sbjct: 355  DGNVDGGSDLDVSENEESGSSKKRKAKKRSRSQAKEMSSPSMP-ATASQGLSTDDNVEWG 413

Query: 438  SKELLDFVANTRNGDTSVLSHFDVQGLLLEYITRNNLRDPHQKSRILCDSRLKNLFGKAS 259
            SKELL+FV + +NGD +VLS FDVQ LLLEYI RN LRDP +KS+I+CDSRL++LFGK  
Sbjct: 414  SKELLEFVMHMKNGDRTVLSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLESLFGKPR 473

Query: 258  IGHFEMLRLLRSH-LVKMDTQ-DYIQARLLDTKPSQMEIRGSSESSGKV--------RKR 109
            +GHFEML+LL SH L+K D Q + +   + +T+ SQ+E  G ++ SGK+        RK+
Sbjct: 474  VGHFEMLKLLESHFLIKEDAQINDLHVSVAETESSQLEADG-TDGSGKIKKEKKRRTRKK 532

Query: 108  NDTVPKTNQDDYATTVVH 55
            ++   ++N DDYA   +H
Sbjct: 533  DERGLQSNLDDYAAIDIH 550


>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score =  181 bits (458), Expect = 2e-43
 Identities = 107/258 (41%), Positives = 148/258 (57%), Gaps = 10/258 (3%)
 Frame = -2

Query: 798  RDTDQVDFNDRNSWNPLFKMYWIDLKRKLLFKPDELTRARIAFKGSAVKVGKEEPADQLD 619
            ++  Q+DFND+NSW  LFK YW DLK  L    DEL  A+  +KGS     + +   +L 
Sbjct: 295  KEKGQIDFNDKNSWEYLFKEYWTDLKGSLSLTFDELVHAKNPWKGSETLTSRPDSPGELC 354

Query: 618  DANDDHVSNLGXXXXXXXXXXXXXXXXXXXXXXXIQVGSYNESRAGDDDGMSVLCNTEWA 439
            D N D  S+L                         ++ S +   A    G+S   N EW 
Sbjct: 355  DGNVDGGSDLDVSENEESGSSKKRKAKKRSRSQAKEMSSPSMP-ATASQGLSTDDNVEWG 413

Query: 438  SKELLDFVANTRNGDTSVLSHFDVQGLLLEYITRNNLRDPHQKSRILCDSRLKNLFGKAS 259
            SKELL+FV + +NG+ +VLS FDVQ LLLEYI RN LRDP +KS+I+CDSRL++LFGK  
Sbjct: 414  SKELLEFVMHMKNGNRTVLSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLESLFGKPR 473

Query: 258  IGHFEMLRLLRSH-LVKMDTQ-DYIQARLLDTKPSQMEIRGSSESSGKV--------RKR 109
            +GHFEML+LL SH L+K D Q + +   + +T+ SQ+E  G ++ SGK+        RK+
Sbjct: 474  VGHFEMLKLLESHFLIKEDAQINDLHVSVAETESSQLEADG-TDGSGKIKKEKKRRTRKK 532

Query: 108  NDTVPKTNQDDYATTVVH 55
             +   ++N DDYA   +H
Sbjct: 533  XERGLQSNLDDYAAIDIH 550


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