BLASTX nr result

ID: Cimicifuga21_contig00023459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023459
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]   111   5e-23
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]   111   5e-23
emb|CAN79752.1| hypothetical protein VITISV_041136 [Vitis vinifera]   111   7e-23
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   111   7e-23
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           107   8e-22

>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 263  GDLVFLKVSPMRGVMRFGKKGKLSPRFIGPFPITAAVGNVSFRLALPVQMEGIHDVFHVS 84
            GD VF+KVSP RG+ RFGKKGKL+PRF+GPF I   VG V+++L LP Q+  +HDVFHVS
Sbjct: 1248 GDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVAYKLILPQQLSLVHDVFHVS 1307

Query: 83   MLRKCLKDPDTVVKPTEVEVLTDMTYV 3
            MLRKC  DP  VV   +V++  D +YV
Sbjct: 1308 MLRKCTPDPTWVVDMQDVQISEDTSYV 1334


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 263  GDLVFLKVSPMRGVMRFGKKGKLSPRFIGPFPITAAVGNVSFRLALPVQMEGIHDVFHVS 84
            GD VF+KVSP RG+ RFGKKGKL+PRF+GPF I   VG V+++L LP Q+  +HDVFHVS
Sbjct: 1356 GDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVAYKLILPQQLSLVHDVFHVS 1415

Query: 83   MLRKCLKDPDTVVKPTEVEVLTDMTYV 3
            MLRKC  DP  VV   +V++  D +YV
Sbjct: 1416 MLRKCTPDPTWVVDMQDVQISEDTSYV 1442


>emb|CAN79752.1| hypothetical protein VITISV_041136 [Vitis vinifera]
          Length = 377

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 263 GDLVFLKVSPMRGVMRFGKKGKLSPRFIGPFPITAAVGNVSFRLALPVQMEGIHDVFHVS 84
           GD VF+KVSP RG+ RFGKKGKL+PRF+GPF I   VG V+++L LP Q+  +HDVFHVS
Sbjct: 238 GDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVAYKLILPQQLSLVHDVFHVS 297

Query: 83  MLRKCLKDPDTVVKPTEVEVLTDMTYV 3
           MLRKC  DP  VV   +V++  D +YV
Sbjct: 298 MLRKCTPDPTWVVDLQDVQIREDTSYV 324


>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 263  GDLVFLKVSPMRGVMRFGKKGKLSPRFIGPFPITAAVGNVSFRLALPVQMEGIHDVFHVS 84
            GD VF+KVSP RG+ RFGKKGKL+PRF+GPF I   VG V+++L LP Q+  +HDVFHVS
Sbjct: 1480 GDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVTYKLILPQQLSLVHDVFHVS 1539

Query: 83   MLRKCLKDPDTVVKPTEVEVLTDMTYV 3
            MLRKC  DP  VV   +V++  D +YV
Sbjct: 1540 MLRKCTPDPTWVVDLQDVQISEDTSYV 1566


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  107 bits (268), Expect = 8e-22
 Identities = 45/87 (51%), Positives = 66/87 (75%)
 Frame = -3

Query: 266  VGDLVFLKVSPMRGVMRFGKKGKLSPRFIGPFPITAAVGNVSFRLALPVQMEGIHDVFHV 87
            V D V+LKVSPM+GVMRFGKKGKLSP++IGP+ I   +GNV++ L LP ++E +H VFH+
Sbjct: 1458 VDDWVYLKVSPMKGVMRFGKKGKLSPQYIGPYRIAKRIGNVAYELELPQELEAVHPVFHI 1517

Query: 86   SMLRKCLKDPDTVVKPTEVEVLTDMTY 6
            SML+KC+ DP  ++    + +  +++Y
Sbjct: 1518 SMLKKCIGDPSLILPTESIRIKDNLSY 1544


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