BLASTX nr result
ID: Cimicifuga21_contig00023412
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00023412 (1182 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251... 343 5e-92 ref|XP_002527885.1| RNA binding protein, putative [Ricinus commu... 315 1e-83 ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|2... 314 3e-83 ref|XP_002438709.1| hypothetical protein SORBIDRAFT_10g024810 [S... 283 5e-74 ref|XP_004149107.1| PREDICTED: uncharacterized protein LOC101219... 278 1e-72 >ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251856 [Vitis vinifera] Length = 1440 Score = 343 bits (880), Expect = 5e-92 Identities = 173/258 (67%), Positives = 212/258 (82%) Frame = +2 Query: 407 QLQAAYSTLKAMSSDNNTGAGGMSLAKSLASLLDESSFPVERKTDTRMELKRFIETRIKK 586 Q A YSTL A+S D + G +LAK+LA L++ESS V R RMELKR E RIKK Sbjct: 678 QACAVYSTLGAVSGDADKDIGKPTLAKNLAFLMEESSNHVIRPM-ARMELKRSFELRIKK 736 Query: 587 RVKDQFNNGKFQNLMANVIANPKTLQDAYNCIRLNSNVDLASKCDDICFESMAEELVNGE 766 RVK+Q+ NGKFQ+LM VIANP+TL+DAYNCIR+NSNVDLA D+I F+SMAEEL+ G Sbjct: 737 RVKEQYVNGKFQDLMVKVIANPQTLEDAYNCIRINSNVDLALDGDNISFKSMAEELLGGS 796 Query: 767 FNVQANTVSISTKGERREVLVLPNLKWKVIQEAIRIVMEVVYRPHFSKISHGCRSGRGHR 946 FNV NT SISTK R+EVL+LP+LK KV+QEAIRIV+E+VYRP+FSKISHGCRSGRGH Sbjct: 797 FNVNVNTFSISTKSARKEVLILPSLKLKVVQEAIRIVLEIVYRPYFSKISHGCRSGRGHS 856 Query: 947 SALRYICKEISNPNWWFTLHLKKKADSLVLSKLISTMEEKIEDPSLWSILHSMYDAQVLN 1126 +AL+YI KEISNP+WWF LH+ KK D++VL+KLISTM++KIEDP+L+ ++ +M+ AQVLN Sbjct: 857 TALKYISKEISNPDWWFILHVNKKLDAVVLAKLISTMQDKIEDPNLFVMIQNMFHAQVLN 916 Query: 1127 VEFGGFPKGQGLPQEGLL 1180 +EFGGFPKG GLPQEG+L Sbjct: 917 LEFGGFPKGHGLPQEGVL 934 >ref|XP_002527885.1| RNA binding protein, putative [Ricinus communis] gi|223532736|gb|EEF34516.1| RNA binding protein, putative [Ricinus communis] Length = 715 Score = 315 bits (807), Expect = 1e-83 Identities = 152/211 (72%), Positives = 179/211 (84%) Frame = +2 Query: 548 MELKRFIETRIKKRVKDQFNNGKFQNLMANVIANPKTLQDAYNCIRLNSNVDLASKCDDI 727 MELKR E RIKKRVK+QF NGKFQ+LM VIANP+TL+DAYNCIRLN NVD+AS +I Sbjct: 1 MELKRSFELRIKKRVKEQFLNGKFQDLMMRVIANPETLRDAYNCIRLNGNVDIASDNGNI 60 Query: 728 CFESMAEELVNGEFNVQANTVSISTKGERREVLVLPNLKWKVIQEAIRIVMEVVYRPHFS 907 CFE MAEEL +G F+V ANT SIST+G ++E LVLP LK KV+QEAIRIV+EVVY+PHFS Sbjct: 61 CFEHMAEELASGNFDVSANTFSISTRGVKKETLVLPKLKLKVVQEAIRIVLEVVYKPHFS 120 Query: 908 KISHGCRSGRGHRSALRYICKEISNPNWWFTLHLKKKADSLVLSKLISTMEEKIEDPSLW 1087 +ISHGCRSGRGH +AL+YI KEISNP+WWFTL + KK D+ V++KLIS +E+KIEDP L+ Sbjct: 121 RISHGCRSGRGHHTALKYISKEISNPDWWFTLIINKKLDASVINKLISILEDKIEDPYLY 180 Query: 1088 SILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180 IL MYDAQ LNVEFGG+PKG GLPQEG+L Sbjct: 181 DILRGMYDAQALNVEFGGYPKGHGLPQEGVL 211 >ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|222855701|gb|EEE93248.1| predicted protein [Populus trichocarpa] Length = 738 Score = 314 bits (804), Expect = 3e-83 Identities = 155/236 (65%), Positives = 192/236 (81%) Frame = +2 Query: 473 MSLAKSLASLLDESSFPVERKTDTRMELKRFIETRIKKRVKDQFNNGKFQNLMANVIANP 652 M+LAK LA ++DESS ERK +RMELKR +E RIKKRVK+Q+ NGKF++LM VIAN Sbjct: 1 MTLAKDLAFVVDESSKADERKAKSRMELKRSLELRIKKRVKEQYFNGKFKDLMTKVIANQ 60 Query: 653 KTLQDAYNCIRLNSNVDLASKCDDICFESMAEELVNGEFNVQANTVSISTKGERREVLVL 832 +TL DAYNCIR+N+NVD+A D+I FESM +EL G F+V NT SI+TKG R E+LVL Sbjct: 61 ETLHDAYNCIRINANVDIALDNDNISFESMEKELSGGCFDVGGNTFSIATKGARNEILVL 120 Query: 833 PNLKWKVIQEAIRIVMEVVYRPHFSKISHGCRSGRGHRSALRYICKEISNPNWWFTLHLK 1012 P LK KV+QEAIRIV+EVVYRP+FSKISHGCRSGRGH SAL+YI K+ISNP+WWFTL + Sbjct: 121 PKLKLKVVQEAIRIVLEVVYRPYFSKISHGCRSGRGHHSALKYITKDISNPDWWFTLIIS 180 Query: 1013 KKADSLVLSKLISTMEEKIEDPSLWSILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180 +K D+ +L+KL S M EKI+DP L+ ++ M+DAQVLN+EFGG+ KG GLPQEG+L Sbjct: 181 RKLDTCILNKLFSIMGEKIQDPCLFDMIQGMFDAQVLNMEFGGYLKGHGLPQEGVL 236 >ref|XP_002438709.1| hypothetical protein SORBIDRAFT_10g024810 [Sorghum bicolor] gi|241916932|gb|EER90076.1| hypothetical protein SORBIDRAFT_10g024810 [Sorghum bicolor] Length = 840 Score = 283 bits (725), Expect = 5e-74 Identities = 147/238 (61%), Positives = 184/238 (77%), Gaps = 2/238 (0%) Frame = +2 Query: 473 MSLAKSLASLLDESSFPVER--KTDTRMELKRFIETRIKKRVKDQFNNGKFQNLMANVIA 646 +SLAKSLASL +ES+ V+R K TRME KR E RIKKRVK+QF +GKF LM V+A Sbjct: 89 VSLAKSLASLAEESAAAVQRQRKPLTRMERKRLAELRIKKRVKEQFLDGKFYGLMGKVVA 148 Query: 647 NPKTLQDAYNCIRLNSNVDLASKCDDICFESMAEELVNGEFNVQANTVSISTKGERREVL 826 + TL+DAY+ +RLNSNVDLAS DD+CF ++AEEL NGEF+V+AN S+ K +R L Sbjct: 149 DAATLEDAYDIVRLNSNVDLASAKDDVCFVTLAEELRNGEFDVRANAFSVVAKRKRGGHL 208 Query: 827 VLPNLKWKVIQEAIRIVMEVVYRPHFSKISHGCRSGRGHRSALRYICKEISNPNWWFTLH 1006 VLP L KV+QEAIR+V+EVVYRP FSKISHGCRSGRG+ SALR+I EI P+W FT+ Sbjct: 209 VLPRLNLKVVQEAIRVVLEVVYRPQFSKISHGCRSGRGYHSALRFISDEIGVPDWCFTVP 268 Query: 1007 LKKKADSLVLSKLISTMEEKIEDPSLWSILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180 L K+ DS V SKLIS ++EKI+D L + + M+DA+V+N+ FGG+PKGQGLPQEG+L Sbjct: 269 LHKEVDSSVTSKLISLIQEKIDDTQLVAFMQDMFDAKVINLVFGGYPKGQGLPQEGVL 326 >ref|XP_004149107.1| PREDICTED: uncharacterized protein LOC101219030 [Cucumis sativus] Length = 711 Score = 278 bits (712), Expect = 1e-72 Identities = 138/211 (65%), Positives = 170/211 (80%) Frame = +2 Query: 548 MELKRFIETRIKKRVKDQFNNGKFQNLMANVIANPKTLQDAYNCIRLNSNVDLASKCDDI 727 MELKR +E RIK+RVK Q+ NGKF +LM NVIA P TLQ+ Y+CIR+NSNVD+ S I Sbjct: 1 MELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLI 60 Query: 728 CFESMAEELVNGEFNVQANTVSISTKGERREVLVLPNLKWKVIQEAIRIVMEVVYRPHFS 907 FESMAEEL NG F+V NT SI + R+EVL+LP +K KV+QEAIRIV+E V+RPHFS Sbjct: 61 SFESMAEELSNGNFDVNTNTFSILSS--RKEVLILPKIKLKVLQEAIRIVLECVFRPHFS 118 Query: 908 KISHGCRSGRGHRSALRYICKEISNPNWWFTLHLKKKADSLVLSKLISTMEEKIEDPSLW 1087 KISHGCRSGRGH +AL+YI KEI +P+WWFT+ L KK D LV++KLI+ ME+KIEDP L+ Sbjct: 119 KISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLF 178 Query: 1088 SILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180 +++ S+Y A LN+EFGGFPKG GLPQEG+L Sbjct: 179 AVIRSIYLAGALNLEFGGFPKGHGLPQEGVL 209