BLASTX nr result

ID: Cimicifuga21_contig00023412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023412
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251...   343   5e-92
ref|XP_002527885.1| RNA binding protein, putative [Ricinus commu...   315   1e-83
ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83
ref|XP_002438709.1| hypothetical protein SORBIDRAFT_10g024810 [S...   283   5e-74
ref|XP_004149107.1| PREDICTED: uncharacterized protein LOC101219...   278   1e-72

>ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251856 [Vitis vinifera]
          Length = 1440

 Score =  343 bits (880), Expect = 5e-92
 Identities = 173/258 (67%), Positives = 212/258 (82%)
 Frame = +2

Query: 407  QLQAAYSTLKAMSSDNNTGAGGMSLAKSLASLLDESSFPVERKTDTRMELKRFIETRIKK 586
            Q  A YSTL A+S D +   G  +LAK+LA L++ESS  V R    RMELKR  E RIKK
Sbjct: 678  QACAVYSTLGAVSGDADKDIGKPTLAKNLAFLMEESSNHVIRPM-ARMELKRSFELRIKK 736

Query: 587  RVKDQFNNGKFQNLMANVIANPKTLQDAYNCIRLNSNVDLASKCDDICFESMAEELVNGE 766
            RVK+Q+ NGKFQ+LM  VIANP+TL+DAYNCIR+NSNVDLA   D+I F+SMAEEL+ G 
Sbjct: 737  RVKEQYVNGKFQDLMVKVIANPQTLEDAYNCIRINSNVDLALDGDNISFKSMAEELLGGS 796

Query: 767  FNVQANTVSISTKGERREVLVLPNLKWKVIQEAIRIVMEVVYRPHFSKISHGCRSGRGHR 946
            FNV  NT SISTK  R+EVL+LP+LK KV+QEAIRIV+E+VYRP+FSKISHGCRSGRGH 
Sbjct: 797  FNVNVNTFSISTKSARKEVLILPSLKLKVVQEAIRIVLEIVYRPYFSKISHGCRSGRGHS 856

Query: 947  SALRYICKEISNPNWWFTLHLKKKADSLVLSKLISTMEEKIEDPSLWSILHSMYDAQVLN 1126
            +AL+YI KEISNP+WWF LH+ KK D++VL+KLISTM++KIEDP+L+ ++ +M+ AQVLN
Sbjct: 857  TALKYISKEISNPDWWFILHVNKKLDAVVLAKLISTMQDKIEDPNLFVMIQNMFHAQVLN 916

Query: 1127 VEFGGFPKGQGLPQEGLL 1180
            +EFGGFPKG GLPQEG+L
Sbjct: 917  LEFGGFPKGHGLPQEGVL 934


>ref|XP_002527885.1| RNA binding protein, putative [Ricinus communis]
            gi|223532736|gb|EEF34516.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 715

 Score =  315 bits (807), Expect = 1e-83
 Identities = 152/211 (72%), Positives = 179/211 (84%)
 Frame = +2

Query: 548  MELKRFIETRIKKRVKDQFNNGKFQNLMANVIANPKTLQDAYNCIRLNSNVDLASKCDDI 727
            MELKR  E RIKKRVK+QF NGKFQ+LM  VIANP+TL+DAYNCIRLN NVD+AS   +I
Sbjct: 1    MELKRSFELRIKKRVKEQFLNGKFQDLMMRVIANPETLRDAYNCIRLNGNVDIASDNGNI 60

Query: 728  CFESMAEELVNGEFNVQANTVSISTKGERREVLVLPNLKWKVIQEAIRIVMEVVYRPHFS 907
            CFE MAEEL +G F+V ANT SIST+G ++E LVLP LK KV+QEAIRIV+EVVY+PHFS
Sbjct: 61   CFEHMAEELASGNFDVSANTFSISTRGVKKETLVLPKLKLKVVQEAIRIVLEVVYKPHFS 120

Query: 908  KISHGCRSGRGHRSALRYICKEISNPNWWFTLHLKKKADSLVLSKLISTMEEKIEDPSLW 1087
            +ISHGCRSGRGH +AL+YI KEISNP+WWFTL + KK D+ V++KLIS +E+KIEDP L+
Sbjct: 121  RISHGCRSGRGHHTALKYISKEISNPDWWFTLIINKKLDASVINKLISILEDKIEDPYLY 180

Query: 1088 SILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180
             IL  MYDAQ LNVEFGG+PKG GLPQEG+L
Sbjct: 181  DILRGMYDAQALNVEFGGYPKGHGLPQEGVL 211


>ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|222855701|gb|EEE93248.1|
            predicted protein [Populus trichocarpa]
          Length = 738

 Score =  314 bits (804), Expect = 3e-83
 Identities = 155/236 (65%), Positives = 192/236 (81%)
 Frame = +2

Query: 473  MSLAKSLASLLDESSFPVERKTDTRMELKRFIETRIKKRVKDQFNNGKFQNLMANVIANP 652
            M+LAK LA ++DESS   ERK  +RMELKR +E RIKKRVK+Q+ NGKF++LM  VIAN 
Sbjct: 1    MTLAKDLAFVVDESSKADERKAKSRMELKRSLELRIKKRVKEQYFNGKFKDLMTKVIANQ 60

Query: 653  KTLQDAYNCIRLNSNVDLASKCDDICFESMAEELVNGEFNVQANTVSISTKGERREVLVL 832
            +TL DAYNCIR+N+NVD+A   D+I FESM +EL  G F+V  NT SI+TKG R E+LVL
Sbjct: 61   ETLHDAYNCIRINANVDIALDNDNISFESMEKELSGGCFDVGGNTFSIATKGARNEILVL 120

Query: 833  PNLKWKVIQEAIRIVMEVVYRPHFSKISHGCRSGRGHRSALRYICKEISNPNWWFTLHLK 1012
            P LK KV+QEAIRIV+EVVYRP+FSKISHGCRSGRGH SAL+YI K+ISNP+WWFTL + 
Sbjct: 121  PKLKLKVVQEAIRIVLEVVYRPYFSKISHGCRSGRGHHSALKYITKDISNPDWWFTLIIS 180

Query: 1013 KKADSLVLSKLISTMEEKIEDPSLWSILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180
            +K D+ +L+KL S M EKI+DP L+ ++  M+DAQVLN+EFGG+ KG GLPQEG+L
Sbjct: 181  RKLDTCILNKLFSIMGEKIQDPCLFDMIQGMFDAQVLNMEFGGYLKGHGLPQEGVL 236


>ref|XP_002438709.1| hypothetical protein SORBIDRAFT_10g024810 [Sorghum bicolor]
            gi|241916932|gb|EER90076.1| hypothetical protein
            SORBIDRAFT_10g024810 [Sorghum bicolor]
          Length = 840

 Score =  283 bits (725), Expect = 5e-74
 Identities = 147/238 (61%), Positives = 184/238 (77%), Gaps = 2/238 (0%)
 Frame = +2

Query: 473  MSLAKSLASLLDESSFPVER--KTDTRMELKRFIETRIKKRVKDQFNNGKFQNLMANVIA 646
            +SLAKSLASL +ES+  V+R  K  TRME KR  E RIKKRVK+QF +GKF  LM  V+A
Sbjct: 89   VSLAKSLASLAEESAAAVQRQRKPLTRMERKRLAELRIKKRVKEQFLDGKFYGLMGKVVA 148

Query: 647  NPKTLQDAYNCIRLNSNVDLASKCDDICFESMAEELVNGEFNVQANTVSISTKGERREVL 826
            +  TL+DAY+ +RLNSNVDLAS  DD+CF ++AEEL NGEF+V+AN  S+  K +R   L
Sbjct: 149  DAATLEDAYDIVRLNSNVDLASAKDDVCFVTLAEELRNGEFDVRANAFSVVAKRKRGGHL 208

Query: 827  VLPNLKWKVIQEAIRIVMEVVYRPHFSKISHGCRSGRGHRSALRYICKEISNPNWWFTLH 1006
            VLP L  KV+QEAIR+V+EVVYRP FSKISHGCRSGRG+ SALR+I  EI  P+W FT+ 
Sbjct: 209  VLPRLNLKVVQEAIRVVLEVVYRPQFSKISHGCRSGRGYHSALRFISDEIGVPDWCFTVP 268

Query: 1007 LKKKADSLVLSKLISTMEEKIEDPSLWSILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180
            L K+ DS V SKLIS ++EKI+D  L + +  M+DA+V+N+ FGG+PKGQGLPQEG+L
Sbjct: 269  LHKEVDSSVTSKLISLIQEKIDDTQLVAFMQDMFDAKVINLVFGGYPKGQGLPQEGVL 326


>ref|XP_004149107.1| PREDICTED: uncharacterized protein LOC101219030 [Cucumis sativus]
          Length = 711

 Score =  278 bits (712), Expect = 1e-72
 Identities = 138/211 (65%), Positives = 170/211 (80%)
 Frame = +2

Query: 548  MELKRFIETRIKKRVKDQFNNGKFQNLMANVIANPKTLQDAYNCIRLNSNVDLASKCDDI 727
            MELKR +E RIK+RVK Q+ NGKF +LM NVIA P TLQ+ Y+CIR+NSNVD+ S    I
Sbjct: 1    MELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLI 60

Query: 728  CFESMAEELVNGEFNVQANTVSISTKGERREVLVLPNLKWKVIQEAIRIVMEVVYRPHFS 907
             FESMAEEL NG F+V  NT SI +   R+EVL+LP +K KV+QEAIRIV+E V+RPHFS
Sbjct: 61   SFESMAEELSNGNFDVNTNTFSILSS--RKEVLILPKIKLKVLQEAIRIVLECVFRPHFS 118

Query: 908  KISHGCRSGRGHRSALRYICKEISNPNWWFTLHLKKKADSLVLSKLISTMEEKIEDPSLW 1087
            KISHGCRSGRGH +AL+YI KEI +P+WWFT+ L KK D LV++KLI+ ME+KIEDP L+
Sbjct: 119  KISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLF 178

Query: 1088 SILHSMYDAQVLNVEFGGFPKGQGLPQEGLL 1180
            +++ S+Y A  LN+EFGGFPKG GLPQEG+L
Sbjct: 179  AVIRSIYLAGALNLEFGGFPKGHGLPQEGVL 209


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