BLASTX nr result

ID: Cimicifuga21_contig00023401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023401
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21005.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]   124   6e-27
gb|AAT66765.1| Putative selenium-binding protein, related [Solan...   110   2e-22
ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>emb|CBI21005.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/116 (54%), Positives = 76/116 (65%)
 Frame = +3

Query: 6   VEAAVKSLYSGTIEELDGYCXXXXXXXXXXXXXXXXXXGITVDLPRYVMLMQACGAVGVL 185
           +EAA  S YSGT+EE+D +C                     VDLPRY+ LM+ACG    L
Sbjct: 337 LEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKAL 396

Query: 186 QYAKSVHGHLIRSAVHVKVSVHNKILEMYSKCGSVSDAYEVFESMPERNLTSWDTM 353
           Q AK+VH  LI+S   +KVS +N+ILEMYSKCGS+ DAY VF+ MPERNLTSWDTM
Sbjct: 397 QEAKAVHESLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTM 452


>ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
           [Vitis vinifera]
          Length = 807

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/116 (54%), Positives = 76/116 (65%)
 Frame = +3

Query: 6   VEAAVKSLYSGTIEELDGYCXXXXXXXXXXXXXXXXXXGITVDLPRYVMLMQACGAVGVL 185
           +EAA  S YSGT+EE+D +C                     VDLPRY+ LM+ACG    L
Sbjct: 401 LEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKAL 460

Query: 186 QYAKSVHGHLIRSAVHVKVSVHNKILEMYSKCGSVSDAYEVFESMPERNLTSWDTM 353
           Q AK+VH  LI+S   +KVS +N+ILEMYSKCGS+ DAY VF+ MPERNLTSWDTM
Sbjct: 461 QEAKAVHESLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTM 516


>emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
          Length = 1148

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/116 (54%), Positives = 76/116 (65%)
 Frame = +3

Query: 6   VEAAVKSLYSGTIEELDGYCXXXXXXXXXXXXXXXXXXGITVDLPRYVMLMQACGAVGVL 185
           +EAA  S YSGT+EE+D +C                     VDLPRY+ LM+ACG    L
Sbjct: 401 LEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKAL 460

Query: 186 QYAKSVHGHLIRSAVHVKVSVHNKILEMYSKCGSVSDAYEVFESMPERNLTSWDTM 353
           Q AK+VH  LI+S   +KVS +N+ILEMYSKCGS+ DAY VF+ MPERNLTSWDTM
Sbjct: 461 QEAKAVHESLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTM 516


>gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
          Length = 741

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/121 (46%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   PVEAAVKSLYS----GTIEELDGYCXXXXXXXXXXXXXXXXXXGITVDLPRYVMLMQACG 170
           PVE ++ S  S    G+++ELD  C                   +TVDL RY+MLM  C 
Sbjct: 331 PVEQSIDSDDSSSKKGSVDELDDLCKEGKVKEAVEVLQLLDQQHVTVDLSRYIMLMDVCS 390

Query: 171 AVGVLQYAKSVHGHLIRSAVHVKVSVHNKILEMYSKCGSVSDAYEVFESMPERNLTSWDT 350
               L+ AKS+H HL+RS  H+ + ++NKILEMY KCGS+ DA+ VF  MP+RNLTSWDT
Sbjct: 391 EDKSLEDAKSIHEHLVRSHPHLDIKMYNKILEMYGKCGSMKDAFLVFRKMPQRNLTSWDT 450

Query: 351 M 353
           M
Sbjct: 451 M 451


>ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g25580-like [Glycine max]
          Length = 664

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/115 (46%), Positives = 70/115 (60%)
 Frame = +3

Query: 9   EAAVKSLYSGTIEELDGYCXXXXXXXXXXXXXXXXXXGITVDLPRYVMLMQACGAVGVLQ 188
           +A+  S Y GT+EELD +C                   I VDLPRY+ LM  CG    L+
Sbjct: 259 KASNDSPYRGTLEELDNFCIEGNVKEAVEVLELLEKLDIPVDLPRYLQLMHQCGENKSLE 318

Query: 189 YAKSVHGHLIRSAVHVKVSVHNKILEMYSKCGSVSDAYEVFESMPERNLTSWDTM 353
            AK+VH H ++    ++VS +N+ILEMY +CGSV DA  +F +MPERNLT+WDTM
Sbjct: 319 EAKNVHRHALQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTM 373


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