BLASTX nr result

ID: Cimicifuga21_contig00023368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023368
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545546.1| PREDICTED: uncharacterized protein LOC100813...   131   6e-29
ref|XP_003549199.1| PREDICTED: uncharacterized protein LOC100800...   128   5e-28
ref|XP_002532121.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002272001.1| PREDICTED: uncharacterized protein LOC100263...   119   3e-25
ref|XP_002324952.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_003545546.1| PREDICTED: uncharacterized protein LOC100813676 [Glycine max]
          Length = 68

 Score =  131 bits (329), Expect = 6e-29
 Identities = 56/63 (88%), Positives = 60/63 (95%)
 Frame = +3

Query: 168 MCLVFVCDEEERVLGTQVAPGSCPYCGGVVQAMDVESAWRFCFLPLCFKTKRKYYCTMCS 347
           MCLVFVCDEEERVLG Q APG+CPYCGG+VQA+DVES WRFCFLPLCFKTKRKYYCTMC+
Sbjct: 1   MCLVFVCDEEERVLGRQTAPGACPYCGGMVQAIDVESQWRFCFLPLCFKTKRKYYCTMCT 60

Query: 348 RRL 356
           RRL
Sbjct: 61  RRL 63


>ref|XP_003549199.1| PREDICTED: uncharacterized protein LOC100800541 [Glycine max]
          Length = 66

 Score =  128 bits (321), Expect = 5e-28
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = +3

Query: 168 MCLVFVCDEEERVLGTQVAPGSCPYCGGVVQAMDVESAWRFCFLPLCFKTKRKYYCTMCS 347
           MCLVFVC+EEERVLG Q APG+CPYCGG+VQA++VES WRFCFLPLCFKTKRKYYCTMC+
Sbjct: 1   MCLVFVCNEEERVLGRQTAPGACPYCGGMVQAINVESQWRFCFLPLCFKTKRKYYCTMCT 60

Query: 348 RRLVV 362
           RRL V
Sbjct: 61  RRLEV 65


>ref|XP_002532121.1| conserved hypothetical protein [Ricinus communis]
           gi|223528201|gb|EEF30261.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 67

 Score =  119 bits (298), Expect = 3e-25
 Identities = 50/65 (76%), Positives = 60/65 (92%)
 Frame = +3

Query: 168 MCLVFVCDEEERVLGTQVAPGSCPYCGGVVQAMDVESAWRFCFLPLCFKTKRKYYCTMCS 347
           MCLVFVCDEEERV+  Q APG+CPYCGG+VQAMDVES WRFCFLPL FKTK+++YC++C+
Sbjct: 1   MCLVFVCDEEERVVARQPAPGACPYCGGMVQAMDVESQWRFCFLPLYFKTKKRFYCSVCA 60

Query: 348 RRLVV 362
           RRLV+
Sbjct: 61  RRLVM 65


>ref|XP_002272001.1| PREDICTED: uncharacterized protein LOC100263050 [Vitis vinifera]
          Length = 67

 Score =  119 bits (297), Expect = 3e-25
 Identities = 48/65 (73%), Positives = 60/65 (92%)
 Frame = +3

Query: 168 MCLVFVCDEEERVLGTQVAPGSCPYCGGVVQAMDVESAWRFCFLPLCFKTKRKYYCTMCS 347
           MCLVFVCD+EERV+G   APG+CPYCGG++QAMDVESAWRFCFLP  F+TKRK++C++C+
Sbjct: 1   MCLVFVCDQEERVVGRHPAPGACPYCGGMIQAMDVESAWRFCFLPFFFRTKRKFFCSVCT 60

Query: 348 RRLVV 362
           RRLV+
Sbjct: 61  RRLVI 65


>ref|XP_002324952.1| predicted protein [Populus trichocarpa] gi|222866386|gb|EEF03517.1|
           predicted protein [Populus trichocarpa]
          Length = 67

 Score =  119 bits (297), Expect = 3e-25
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +3

Query: 168 MCLVFVCDEEERVLGTQVAPGSCPYCGGVVQAMDVESAWRFCFLPLCFKTKRKYYCTMCS 347
           MCLVFVCDE+E+V+  Q APG+CPYCGG +QAMDVES WRFCFLPL FKTK++YYCT+C+
Sbjct: 1   MCLVFVCDEDEKVVARQTAPGACPYCGGAIQAMDVESQWRFCFLPLYFKTKKRYYCTLCA 60

Query: 348 RRLVV 362
           R+L V
Sbjct: 61  RKLAV 65


Top