BLASTX nr result
ID: Cimicifuga21_contig00023320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00023320
(1441 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinif... 301 2e-79
emb|CBI18003.3| unnamed protein product [Vitis vinifera] 301 3e-79
ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223... 301 3e-79
gb|AEV41137.1| D6-type cyclin [Populus x canadensis] 299 1e-78
ref|XP_002305644.1| predicted protein [Populus trichocarpa] gi|1... 296 7e-78
>ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinifera]
Length = 294
Score = 301 bits (772), Expect = 2e-79
Identities = 166/294 (56%), Positives = 205/294 (69%), Gaps = 20/294 (6%)
Frame = -2
Query: 1314 MEFDLENPLTGLQEHQSDTIPSLFASESDHMPK----------HFDASVRRQAISLIHEH 1165
MEFDLENPLT Q+ S + SLF +E+ HMP D S RRQAIS I +
Sbjct: 1 MEFDLENPLTSSQDLHSHAVASLFQAENHHMPSIDYCGSLDSVDCDVSFRRQAISSILQ- 59
Query: 1164 FSCNSDPFIAYLAVNYLDRFISNHELPLGNQWILKLLCMSCLSLAAKMKKIEFSL---QG 994
S + DPF++YLA+NYLDRF+S E+P WIL+LL +SC+SLAAKMKK EFSL QG
Sbjct: 60 MSSSFDPFLSYLAINYLDRFLSRSEMPSEKPWILRLLAVSCVSLAAKMKKTEFSLADFQG 119
Query: 993 EEQFIMDAQTIQRMELLILGALKWRLRSVTPFSFIHFFLSLFKLKDPPLMQALKARATEI 814
E FI D++TI RME+L+LGALKWR+RSVTPFSFI FF+SLFKLKDPPL++ALKAR EI
Sbjct: 120 EGGFIFDSETIMRMEILVLGALKWRMRSVTPFSFISFFISLFKLKDPPLLEALKARVIEI 179
Query: 813 VFKAQNETRLLEFKPXXXXXXXXXXXSHELFPLQFPCFRNAISSCVHVNNEKLLDCCSVI 634
+ K+Q E +LL+FKP HELFPLQFPCF AIS+C +VN EK+L C S +
Sbjct: 180 ILKSQKEIKLLQFKPSIIAASTLLYACHELFPLQFPCFMTAISNCPYVNKEKMLCCYSAV 239
Query: 633 KDLMIMDG---YDVVSSSNTEVNVLDCNWSSSESE----MTTERDIKRRKINDF 493
+++ I + Y VVSSS++ VNVLD + SSESE M E D+KRRKI+ F
Sbjct: 240 REMEIKEFDSLYGVVSSSSSPVNVLDRHCLSSESEKSHTMGAESDVKRRKISVF 293
>emb|CBI18003.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 301 bits (771), Expect = 3e-79
Identities = 170/308 (55%), Positives = 209/308 (67%), Gaps = 24/308 (7%)
Frame = -2
Query: 1314 MEFDLENPLTGLQEHQSDTIPSLFASESDHMPK----------HFDASVRRQAISLIHEH 1165
MEFDLENPLT Q+ S + SLF +E+ HMP D S RRQAIS I +
Sbjct: 1 MEFDLENPLTSSQDLHSHAVASLFQAENHHMPSIDYCGSLDSVDCDVSFRRQAISSILQ- 59
Query: 1164 FSCNSDPFIAYLAVNYLDRFISNHELPLGNQWILKLLCMSCLSLAAKMKKIEFSL---QG 994
S + DPF++YLA+NYLDRF+S E+P WIL+LL +SC+SLAAKMKK EFSL QG
Sbjct: 60 MSSSFDPFLSYLAINYLDRFLSRSEMPSEKPWILRLLAVSCVSLAAKMKKTEFSLADFQG 119
Query: 993 EEQFIMDAQTIQRMELLILGALKWRLRSVTPFSFIHFFLSLFKLKDPPLMQALKARATEI 814
E FI D++TI RME+L+LGALKWR+RSVTPFSFI FF+SLFKLKDPPL++ALKAR EI
Sbjct: 120 EGGFIFDSETIMRMEILVLGALKWRMRSVTPFSFISFFISLFKLKDPPLLEALKARVIEI 179
Query: 813 VFKAQNETRLLEFKPXXXXXXXXXXXSHELFPLQFPCFRNAISSCVHVNNEKLLDCCSVI 634
+ K+Q E +LL+FKP HELFPLQFPCF AIS+C +VN EK+L C S +
Sbjct: 180 ILKSQKEIKLLQFKPSIIAASTLLYACHELFPLQFPCFMTAISNCPYVNKEKMLCCYSAV 239
Query: 633 KDLMIMDG---YDVVSSSNTEVNVLDCNWSSSESE----MTTERDIKRRKI----NDFRC 487
+++ I + Y VVSSS++ VNVLD + SSESE M E D+KRRKI N F
Sbjct: 240 REMEIKEFDSLYGVVSSSSSPVNVLDRHCLSSESEKSHTMGAESDVKRRKISWGNNSFDN 299
Query: 486 SEFSQIQN 463
S +QN
Sbjct: 300 KIISFLQN 307
>ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223536067|gb|EEF37725.1|
cyclin d, putative [Ricinus communis]
Length = 305
Score = 301 bits (771), Expect = 3e-79
Identities = 164/305 (53%), Positives = 208/305 (68%), Gaps = 27/305 (8%)
Frame = -2
Query: 1314 MEFDLENPLTGLQEHQSDTIPSLFASESDHMPKH----------FDASVRRQAISLIHE- 1168
MEFDLENPLT EHQSDTIP LFASESDHMP F +S R++AISLI +
Sbjct: 1 MEFDLENPLTSSNEHQSDTIPDLFASESDHMPSRDFLKCLKTCDFYSSFRQEAISLILQA 60
Query: 1167 HFSCNSDPFIAYLAVNYLDRFISNHELPLGNQWILKLLCMSCLSLAAKMKKIEF---SLQ 997
++CN +PF AYLA+NY+DR +S E+P G W+L+LL +SCLSLAAKMK F +LQ
Sbjct: 61 QYTCNFEPFFAYLAINYMDRCVSRQEIPQGKPWLLRLLAISCLSLAAKMKDTHFPLSNLQ 120
Query: 996 GEEQFIMDAQTIQRMELLILGALKWRLRSVTPFSFIHFFLSLFKLKDPPLMQALKARATE 817
EE F D QT+ RMELLILGAL WR+RS+TPFSF+HFF+SLF+LKDPPL QALK RATE
Sbjct: 121 REESFNFDMQTVSRMELLILGALNWRMRSITPFSFLHFFISLFELKDPPLTQALKDRATE 180
Query: 816 IVFKAQNETRLLEFKPXXXXXXXXXXXSHELFPLQFPCFRNAISSCVHVNNEKLLDCCSV 637
I+FKA +E +LLEF+P SHELFPLQ+P F+ +I SC VN E LL C +
Sbjct: 181 IIFKAHHEIKLLEFRPSVIAASALLVASHELFPLQYPSFKCSIFSCECVNKENLLRCLNA 240
Query: 636 IKDLMIMDGY----DVVSSSNTEVNVLDCNWSSSESE---------MTTERDIKRRKIND 496
++ ++ M Y D VSS+ T +++LD + + SESE +T +++IKR K
Sbjct: 241 LQQMVEMVWYESMLDTVSSTRTPLSILDRHCTKSESETTSITTATALTDKKEIKRYKTIG 300
Query: 495 FRCSE 481
+R SE
Sbjct: 301 YRSSE 305
>gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
Length = 324
Score = 299 bits (765), Expect = 1e-78
Identities = 167/305 (54%), Positives = 203/305 (66%), Gaps = 33/305 (10%)
Frame = -2
Query: 1314 MEFDLENPLTGLQEHQSDTIPSLFASESDHMPKH----------FDASVRRQAISLIHEH 1165
M+F+LENPLT E DT PSLF ESDHMP FD S RR+AIS +
Sbjct: 1 MDFNLENPLTNSHELHFDTTPSLFLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVFR- 59
Query: 1164 FSCNSDPFIAYLAVNYLDRFISNHELPLGNQWILKLLCMSCLSLAAKMKKIEF---SLQG 994
SCN DP ++YLAVNYLDRF+S+ +P W+LKLL ++C+SLAAKMK+ EF +QG
Sbjct: 60 VSCNFDPSLSYLAVNYLDRFLSSQGIPQPKPWVLKLLAVACVSLAAKMKEAEFYVTDIQG 119
Query: 993 EEQFIMDAQTIQRMELLILGALKWRLRSVTPFSFIHFFLSLFKLKDPPLMQALKARATEI 814
+ F+ D QTIQ+ME+LILGAL WR+RS+TPFSFI FF+SLFK KDPPL QALKARA EI
Sbjct: 120 DGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKARACEI 179
Query: 813 VFKAQNETRLLEFKPXXXXXXXXXXXSHELFPLQFPCFRNAISSCVHVNNEKLLDCCSVI 634
+FKAQN+ LLEF+P HELFP+QF CFR AIS C HVN E LL C + +
Sbjct: 180 IFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISICSHVNKENLLQCYNAM 239
Query: 633 KDLMIMDGY----DVVSSSNTEVNVLDCNWSSSESEMTT----------------ERDIK 514
++ MDGY D+VSSS+T VNVLD ++ SSESE T E+DIK
Sbjct: 240 QE-TAMDGYKSQFDMVSSSDTPVNVLDRHFLSSESENTNGTVVMISSDGSNKTWPEKDIK 298
Query: 513 RRKIN 499
RRKI+
Sbjct: 299 RRKIS 303
>ref|XP_002305644.1| predicted protein [Populus trichocarpa] gi|159025731|emb|CAN88866.1|
D6-type cyclin [Populus trichocarpa]
gi|222848608|gb|EEE86155.1| predicted protein [Populus
trichocarpa]
Length = 305
Score = 296 bits (759), Expect = 7e-78
Identities = 165/300 (55%), Positives = 204/300 (68%), Gaps = 28/300 (9%)
Frame = -2
Query: 1314 MEFDLENPLTGLQEHQSDTIPSLFASESDHMPKH----------FDASVRRQAISLIHE- 1168
MEFDLEN LT L+EHQSDT+P+LFASESDHMP F S R++AISLI +
Sbjct: 1 MEFDLENSLTSLEEHQSDTVPNLFASESDHMPSRNFLHCLKTSGFYVSFRQEAISLILQA 60
Query: 1167 HFSCNSDPFIAYLAVNYLDRFISNHELPLGNQWILKLLCMSCLSLAAKMKKIEFSL---Q 997
+SCN D FI YLAVNY+DRFIS E+P G WIL+L+ +SCLSLAAKMK FS+ Q
Sbjct: 61 QYSCNYDAFIPYLAVNYMDRFISKQEIPQGKPWILRLVVISCLSLAAKMKNAHFSVSDFQ 120
Query: 996 GEEQ-FIMDAQTIQRMELLILGALKWRLRSVTPFSFIHFFLSLFKLKDPPLMQALKARAT 820
GEE FI D QTI RMELLIL AL WR+RS+TPFSF+HFF+S+ +LKDP Q LK RAT
Sbjct: 121 GEEAGFIFDTQTINRMELLILDALNWRMRSITPFSFVHFFISVLELKDPSSSQPLKDRAT 180
Query: 819 EIVFKAQNETRLLEFKPXXXXXXXXXXXSHELFPLQFPCFRNAISSCVHVNNEKLLDCCS 640
EI+FKAQNE + LEFKP S+EL PLQFP F+ +ISSC VN EKLL C +
Sbjct: 181 EIIFKAQNEIKFLEFKPSIVAASALLVASNELLPLQFPLFKCSISSCAFVNKEKLLSCFN 240
Query: 639 VIKDLMIMDGY----DVVSSSNTEVNVLDCNWSSSESEMT---------TERDIKRRKIN 499
+++++ M+ Y D +S + T ++VLD + SESE T T +IKRR++N
Sbjct: 241 AVQEMVEMEWYESMLDTMSCTRTPLSVLDRQCTKSESETTSTTSINNGSTVPEIKRRRLN 300