BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023317
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16176.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat...    92   4e-17
ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat...    88   8e-16
ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15

>emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/79 (56%), Positives = 54/79 (68%)
 Frame = -2

Query: 239 NFLPKPRNICNSTNKISPKDQERDEGFITILREIIRGKQSWKLAFNNNFISQRLKPHHIE 60
           NFL K R  C S           D  F+  L +I+RG QSW++A NN+FISQ LKPHH+E
Sbjct: 14  NFLRKQRTFCASP----------DSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHHVE 63

Query: 59  SVLIQTLDDAKLALRFFNF 3
            VLIQTLDD++LALRFFNF
Sbjct: 64  KVLIQTLDDSRLALRFFNF 82


>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/79 (56%), Positives = 54/79 (68%)
 Frame = -2

Query: 239 NFLPKPRNICNSTNKISPKDQERDEGFITILREIIRGKQSWKLAFNNNFISQRLKPHHIE 60
           NFL K R  C S           D  F+  L +I+RG QSW++A NN+FISQ LKPHH+E
Sbjct: 14  NFLRKQRTFCASP----------DSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHHVE 63

Query: 59  SVLIQTLDDAKLALRFFNF 3
            VLIQTLDD++LALRFFNF
Sbjct: 64  KVLIQTLDDSRLALRFFNF 82


>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/78 (56%), Positives = 57/78 (73%)
 Frame = -2

Query: 236 FLPKPRNICNSTNKISPKDQERDEGFITILREIIRGKQSWKLAFNNNFISQRLKPHHIES 57
           F  KP+++   T+ I   D  +D  FI  LR I+RGK+SWK+AFN+ FIS +LKPHH+E 
Sbjct: 19  FQTKPKHLY-CTSAIQDNDV-KDSQFIATLRNIVRGKESWKIAFNDPFISTKLKPHHVEK 76

Query: 56  VLIQTLDDAKLALRFFNF 3
           VL+ TLDD +LALRFFNF
Sbjct: 77  VLLLTLDDTRLALRFFNF 94


>ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/63 (63%), Positives = 51/63 (80%)
 Frame = -2

Query: 191 SPKDQERDEGFITILREIIRGKQSWKLAFNNNFISQRLKPHHIESVLIQTLDDAKLALRF 12
           S  D+E D  F+++L +I+RGKQSWK+AFN+  IS  L+PHH+E VL+ TLDDAKLALRF
Sbjct: 30  SKPDEENDCRFVSLLCDIVRGKQSWKVAFNDASISSTLRPHHVEQVLMNTLDDAKLALRF 89

Query: 11  FNF 3
           FNF
Sbjct: 90  FNF 92


>ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
           gi|449501214|ref|XP_004161309.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 37/60 (61%), Positives = 49/60 (81%)
 Frame = -2

Query: 182 DQERDEGFITILREIIRGKQSWKLAFNNNFISQRLKPHHIESVLIQTLDDAKLALRFFNF 3
           D E D  F+ +L +I+RG QSWK+AFNN+ IS  ++PHH+E VLI+TLDD++LALRFFNF
Sbjct: 33  DNENDSHFVYVLEQIVRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNF 92