BLASTX nr result

ID: Cimicifuga21_contig00023314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023314
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629024.1| hypothetical protein MTR_8g072310 [Medicago ...    99   5e-19
ref|XP_002328759.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
ref|XP_003548765.1| PREDICTED: uncharacterized protein LOC100819...    94   2e-17
ref|XP_003547737.1| PREDICTED: uncharacterized protein LOC100780...    92   5e-17
emb|CBI29197.3| unnamed protein product [Vitis vinifera]               92   5e-17

>ref|XP_003629024.1| hypothetical protein MTR_8g072310 [Medicago truncatula]
           gi|355523046|gb|AET03500.1| hypothetical protein
           MTR_8g072310 [Medicago truncatula]
          Length = 655

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 53/126 (42%), Positives = 70/126 (55%)
 Frame = -2

Query: 380 QQACRDMTNSKPLFLTIYAVVLVGIIFSSIYVFSAIYGGNXXXXXXXXXXXXXXXXYAPN 201
           +  C ++T SKPLFLTIY VV++GI+ SS YVFSAIY  N                  P+
Sbjct: 4   RNGCEEVTQSKPLFLTIYTVVIIGIVVSSFYVFSAIYSSNTPASQSSAWLSSSISTEDPH 63

Query: 200 GDSTFRDTAPNVSRPAAEVGKRDPSSMTTNISISLIWEVPPHGTKMPPIEAFGLTKELVE 21
                 D   N+S+         PS +  N+  S +WE+PP   KMPP++ F LTKELV+
Sbjct: 64  ----HIDHTLNISQSEKSPTVSIPSPVKENVWPSSVWEIPPSNKKMPPLKNFRLTKELVQ 119

Query: 20  ERVKDN 3
           +RVKDN
Sbjct: 120 QRVKDN 125


>ref|XP_002328759.1| predicted protein [Populus trichocarpa] gi|222839057|gb|EEE77408.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 52/126 (41%), Positives = 69/126 (54%)
 Frame = -2

Query: 380 QQACRDMTNSKPLFLTIYAVVLVGIIFSSIYVFSAIYGGNXXXXXXXXXXXXXXXXYAPN 201
           + A +++ NSKPLF+ IYA V +GI+FSS+YV SA+Y  N                   N
Sbjct: 16  RNAYQEIANSKPLFVAIYATVFLGIVFSSLYVLSAVYSANSSSSSTSWLSSPPIPTSIDN 75

Query: 200 GDSTFRDTAPNVSRPAAEVGKRDPSSMTTNISISLIWEVPPHGTKMPPIEAFGLTKELVE 21
                       +RPA   G   P+S    + I  IWE PPHGTK PP++ F LTK+LV+
Sbjct: 76  ------------TRPA---GSSPPTSNPQTMQIKPIWEPPPHGTKFPPLKTFRLTKQLVQ 120

Query: 20  ERVKDN 3
           +RVKDN
Sbjct: 121 QRVKDN 126


>ref|XP_003548765.1| PREDICTED: uncharacterized protein LOC100819032 [Glycine max]
          Length = 639

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 54/126 (42%), Positives = 71/126 (56%)
 Frame = -2

Query: 380 QQACRDMTNSKPLFLTIYAVVLVGIIFSSIYVFSAIYGGNXXXXXXXXXXXXXXXXYAPN 201
           ++ C ++ NSKPLFLTIY VV++GI+ SS +VFSAIY  N                    
Sbjct: 4   RKGCEEVANSKPLFLTIYTVVIIGIVVSSFFVFSAIYSTNPPSAQSSAWLSSISSDETRV 63

Query: 200 GDSTFRDTAPNVSRPAAEVGKRDPSSMTTNISISLIWEVPPHGTKMPPIEAFGLTKELVE 21
            D T +     VSR AA +    PS  + N   + IW+ PP   KMPP+E F LTK+LV+
Sbjct: 64  TDQTLK-----VSRSAAVLIVPTPSPGSQNEWPTSIWDDPPPNKKMPPLEDFRLTKKLVQ 118

Query: 20  ERVKDN 3
           +RVKDN
Sbjct: 119 QRVKDN 124


>ref|XP_003547737.1| PREDICTED: uncharacterized protein LOC100780346 [Glycine max]
          Length = 638

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 56/122 (45%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
 Frame = -2

Query: 365 DMTNSKPLFLTIYAVVLVGIIFSSIYVFSAIYGGNXXXXXXXXXXXXXXXXYAPNGDST- 189
           ++ NSKPLFLTIY VV++GI+ SS YVFSAIY  N                 + + D+T 
Sbjct: 9   EVANSKPLFLTIYTVVIIGIVVSSFYVFSAIYSAN------PPSAQSSAWLSSISSDATH 62

Query: 188 FRDTAPNVSRPAAEVGKRDPSSMTTNISISLIWEVPPHGTKMPPIEAFGLTKELVEERVK 9
             D   NVS+ AA      PS    N S   IW+ PP   KMPP++ F LTKELV +RVK
Sbjct: 63  VTDQTLNVSQSAAVHTVPPPSPRPRNESPRSIWDDPPPNKKMPPLKDFRLTKELVRQRVK 122

Query: 8   DN 3
           DN
Sbjct: 123 DN 124


>emb|CBI29197.3| unnamed protein product [Vitis vinifera]
          Length = 642

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 56/124 (45%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
 Frame = -2

Query: 365 DMTNSKPLFLTIYAVVLVGIIFSSIYVFSAIYGGNXXXXXXXXXXXXXXXXYAPNGDSTF 186
           D  NSKPLFLTIYA V+VGI+FSS YVFSAIY  +                       T 
Sbjct: 8   DAANSKPLFLTIYATVIVGIVFSSFYVFSAIYSADSSTWKVSFALLNVSFLTGIVQSVTD 67

Query: 185 RDTAPNVSRP---AAEVGKRDPSSMTTNISISLIWEVPPHGTKMPPIEAFGLTKELVEER 15
            D  PNVS+     A       S  + N+    IWE PP G K P ++AF LTK LVE+R
Sbjct: 68  VDQGPNVSQRTDWGAVPAPPPKSPKSQNMWTRPIWEAPPRGEKRPSLKAFQLTKTLVEQR 127

Query: 14  VKDN 3
           VKDN
Sbjct: 128 VKDN 131


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