BLASTX nr result

ID: Cimicifuga21_contig00023297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023297
         (1440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319404.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11
ref|XP_002517749.1| conserved hypothetical protein [Ricinus comm...    75   6e-11
emb|CBI15853.3| unnamed protein product [Vitis vinifera]               71   8e-10
ref|XP_002270636.1| PREDICTED: uncharacterized protein LOC100263...    71   8e-10
ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-09

>ref|XP_002319404.1| predicted protein [Populus trichocarpa] gi|222857780|gb|EEE95327.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = +2

Query: 944  SLLDYFFSKSKYMVSKPASIAILMMPMEGAFFLLLHTHNVPL*ISTAITGVC 1099
            SLLD+F SKS+YM+S+PA I +LM PM GAFFLLL+T N+ L ISTAI GVC
Sbjct: 365  SLLDFFLSKSRYMISRPACIGVLMAPMAGAFFLLLNTANISLYISTAIIGVC 416


>ref|XP_002517749.1| conserved hypothetical protein [Ricinus communis]
            gi|223543147|gb|EEF44681.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 521

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
 Frame = +2

Query: 881  ESLNYHSPSSVLLADTP-----SISKSLLDYFFSKSKYMVSKPASIAILMMPMEGAFFLL 1045
            ES  Y   SS++   +       +  SL+DYFFS+S++++S+PASIA LM PM GAFFLL
Sbjct: 348  ESRGYSGTSSLVSLSSSFGFFGRLMPSLVDYFFSRSRHLISRPASIAALMAPMTGAFFLL 407

Query: 1046 LHTHNVPL*ISTAITGVC 1099
            L+  N+ L ISTAI GVC
Sbjct: 408  LNKSNISLYISTAIIGVC 425


>emb|CBI15853.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
 Frame = +2

Query: 881  ESLNYHSPSSVLLADTP-----SISKSLLDYFFSKSKYMVSKPASIAILMMPMEGAFFLL 1045
            ES  Y S SS++   +       +  SL DYFFS+SKY+VS+PAS+  LM P+ GAFF+L
Sbjct: 266  ESRGYSSTSSLVSLSSAFGFFGRLMPSLQDYFFSRSKYVVSRPASLVALMAPISGAFFIL 325

Query: 1046 LHTHNVPL*ISTAITGVC 1099
            ++  N+ L ISTAI GVC
Sbjct: 326  VNPTNLCLYISTAIIGVC 343


>ref|XP_002270636.1| PREDICTED: uncharacterized protein LOC100263887 [Vitis vinifera]
          Length = 531

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
 Frame = +2

Query: 881  ESLNYHSPSSVLLADTP-----SISKSLLDYFFSKSKYMVSKPASIAILMMPMEGAFFLL 1045
            ES  Y S SS++   +       +  SL DYFFS+SKY+VS+PAS+  LM P+ GAFF+L
Sbjct: 350  ESRGYSSTSSLVSLSSAFGFFGRLMPSLQDYFFSRSKYVVSRPASLVALMAPISGAFFIL 409

Query: 1046 LHTHNVPL*ISTAITGVC 1099
            ++  N+ L ISTAI GVC
Sbjct: 410  VNPTNLCLYISTAIIGVC 427


>ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|222849420|gb|EEE86967.1|
           predicted protein [Populus trichocarpa]
          Length = 746

 Score = 65.1 bits (157), Expect(2) = 1e-09
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = -2

Query: 875 EVWLYKDPAGKTQGPFPLDQLRRWSKGGHFPADIRVWR 762
           ++W YKDP+GK QGPF + QLR+WS  G+FPAD+R+WR
Sbjct: 182 KIWHYKDPSGKNQGPFSMVQLRKWSNTGYFPADLRIWR 219



 Score = 25.0 bits (53), Expect(2) = 1e-09
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = -3

Query: 760 QDNSVLLVDALSGN 719
           +D+S+LL DALSGN
Sbjct: 224 KDDSILLTDALSGN 237


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