BLASTX nr result

ID: Cimicifuga21_contig00023296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023296
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Ger...    73   2e-11
gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Ge...    73   2e-11
gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Ger...    73   2e-11
gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Ge...    73   2e-11
gb|AFC90807.1| nucleotide-binding site leucine-rich repeat prote...    69   3e-10

>gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Gerbera hybrid
           cultivar] gi|408905175|gb|AFU97134.1| NB-LRR
           resistance-like protein RC81, partial [Gerbera hybrid
           cultivar]
          Length = 165

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 49/77 (63%)
 Frame = +2

Query: 2   IRKRLVEEHHFDKVIWVPISKGANARKLQADIAVELGINLSIEEDETERSRLLLGALEGK 181
           I  +L++   FD+VIWV +SK  N  KLQ DIA    + LS+EE    R+  LL  L+GK
Sbjct: 12  IYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATRLLEHLQGK 71

Query: 182 RFTLILDDVWQVFSLHE 232
           +F LILDD+W  FSL E
Sbjct: 72  KFVLILDDMWHKFSLEE 88


>gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Gerbera hybrid
           cultivar]
          Length = 166

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 49/77 (63%)
 Frame = +2

Query: 2   IRKRLVEEHHFDKVIWVPISKGANARKLQADIAVELGINLSIEEDETERSRLLLGALEGK 181
           I  +L++   FD+VIWV +SK  N  KLQ DIA    + LS+EE    R+  LL  L+GK
Sbjct: 12  IYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATRLLEHLQGK 71

Query: 182 RFTLILDDVWQVFSLHE 232
           +F LILDD+W  FSL E
Sbjct: 72  KFVLILDDMWHKFSLEE 88


>gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Gerbera hybrid
           cultivar]
          Length = 165

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 49/77 (63%)
 Frame = +2

Query: 2   IRKRLVEEHHFDKVIWVPISKGANARKLQADIAVELGINLSIEEDETERSRLLLGALEGK 181
           I  +L++   FD+VIWV +SK  N  KLQ DIA    + LS+EE    R+  LL  L+GK
Sbjct: 12  IYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATRLLEHLQGK 71

Query: 182 RFTLILDDVWQVFSLHE 232
           +F LILDD+W  FSL E
Sbjct: 72  KFVLILDDMWHKFSLEE 88


>gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Gerbera hybrid
           cultivar]
          Length = 164

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 49/77 (63%)
 Frame = +2

Query: 2   IRKRLVEEHHFDKVIWVPISKGANARKLQADIAVELGINLSIEEDETERSRLLLGALEGK 181
           I  +L++   FD+VIWV +SK  N  KLQ DIA    + LS+EE    R+  LL  L+GK
Sbjct: 12  IYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATRLLEHLQGK 71

Query: 182 RFTLILDDVWQVFSLHE 232
           +F LILDD+W  FSL E
Sbjct: 72  KFVLILDDMWHKFSLEE 88


>gb|AFC90807.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 266

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   IRKRLVEEHH-FDKVIWVPISKGANARKLQADIAVELGINLSIEEDETERSRLLLGAL-E 175
           I+ RL+EE   FD V WV +SK  N  KLQ+DIA EL  +LS +EDE  R++ L  AL  
Sbjct: 8   IQNRLLEEKDKFDGVFWVTVSKAFNIIKLQSDIAKELNFSLSDDEDERRRAKHLHAALSR 67

Query: 176 GKRFTLILDDVWQVFSL 226
            KR+ LI+DD+W+ F L
Sbjct: 68  WKRYVLIIDDLWEAFRL 84


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