BLASTX nr result

ID: Cimicifuga21_contig00023270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023270
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27062.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing ...   147   1e-33
emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]   147   1e-33
gb|ACT33043.1| RAV transcription factor [Camellia sinensis]           140   8e-32
ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus ...   140   1e-31

>emb|CBI27062.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  147 bits (370), Expect = 1e-33
 Identities = 75/120 (62%), Positives = 85/120 (70%), Gaps = 6/120 (5%)
 Frame = -3

Query: 505 YSYWNSSQSYVLTKGWSRFVKEKRLQAGDVVSFLRSTREDKQLYIDWKPKAGSSSIELQH 326
           YSYWNSSQSYVLTKGWSRFVKEK L+AGD+VSF RST  DKQLYIDWK + G        
Sbjct: 114 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNG-------- 165

Query: 325 PVYPVNSVNLVQPVQIVRLFGVNIFKIP------AVDCSSWNGKRMREVEFLSLECCKKQ 164
              P N +N V+PV++VRLFGVNIFK+P        +  SW GKRM E+E LS EC KKQ
Sbjct: 166 ---PTNQINPVEPVEMVRLFGVNIFKVPVNSSVVVANNGSWTGKRMIEMELLSFECSKKQ 222


>ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score =  147 bits (370), Expect = 1e-33
 Identities = 75/120 (62%), Positives = 85/120 (70%), Gaps = 6/120 (5%)
 Frame = -3

Query: 505 YSYWNSSQSYVLTKGWSRFVKEKRLQAGDVVSFLRSTREDKQLYIDWKPKAGSSSIELQH 326
           YSYWNSSQSYVLTKGWSRFVKEK L+AGD+VSF RST  DKQLYIDWK + G        
Sbjct: 244 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNG-------- 295

Query: 325 PVYPVNSVNLVQPVQIVRLFGVNIFKIP------AVDCSSWNGKRMREVEFLSLECCKKQ 164
              P N +N V+PV++VRLFGVNIFK+P        +  SW GKRM E+E LS EC KKQ
Sbjct: 296 ---PTNQINPVEPVEMVRLFGVNIFKVPVNSSVVVANNGSWTGKRMIEMELLSFECSKKQ 352


>emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score =  147 bits (370), Expect = 1e-33
 Identities = 75/120 (62%), Positives = 85/120 (70%), Gaps = 6/120 (5%)
 Frame = -3

Query: 505 YSYWNSSQSYVLTKGWSRFVKEKRLQAGDVVSFLRSTREDKQLYIDWKPKAGSSSIELQH 326
           YSYWNSSQSYVLTKGWSRFVKEK L+AGD+VSF RST  DKQLYIDWK + G        
Sbjct: 244 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNG-------- 295

Query: 325 PVYPVNSVNLVQPVQIVRLFGVNIFKIP------AVDCSSWNGKRMREVEFLSLECCKKQ 164
              P N +N V+PV++VRLFGVNIFK+P        +  SW GKRM E+E LS EC KKQ
Sbjct: 296 ---PTNQINPVEPVEMVRLFGVNIFKVPVNSSVVVANNGSWTGKRMIEMELLSFECSKKQ 352


>gb|ACT33043.1| RAV transcription factor [Camellia sinensis]
          Length = 362

 Score =  140 bits (354), Expect = 8e-32
 Identities = 74/116 (63%), Positives = 86/116 (74%), Gaps = 3/116 (2%)
 Frame = -3

Query: 505 YSYWNSSQSYVLTKGWSRFVKEKRLQAGDVVSFLRSTREDKQLYIDWKPKAGSSSIELQH 326
           YSYWNSSQSYVLTKGWSRFVKEK L+AGD+VSF RST  D QL+IDWKP+ GS+ +    
Sbjct: 255 YSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVSFYRSTGSDNQLFIDWKPRNGSNPV---- 310

Query: 325 PVYPVNSVNLVQPVQIVRLFGVNIFKIP---AVDCSSWNGKRMREVEFLSLECCKK 167
                     VQPVQ+VRLFGVNIFK+P    +D S+  GKRMRE+E L+LEC KK
Sbjct: 311 ----------VQPVQMVRLFGVNIFKVPISGGLD-SNCGGKRMREMELLALECSKK 355


>ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
           gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1,
           putative [Ricinus communis]
          Length = 371

 Score =  140 bits (352), Expect = 1e-31
 Identities = 74/115 (64%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
 Frame = -3

Query: 505 YSYWNSSQSYVLTKGWSRFVKEKRLQAGDVVSFLRSTREDKQLYIDWKPKAGSSSIELQH 326
           YSYWNSSQSYVLTKGWSRFVKEK L+AGD+V FL+ST  DKQLYIDWK +  + ++   +
Sbjct: 258 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVRFLKSTGPDKQLYIDWKVRTLTPTV--SN 315

Query: 325 PVYPVNSVNLVQPVQIVRLFGVNIFKIPA-VDCSSWNGKRMREVEFLSLECCKKQ 164
           PV     V  VQPVQ+VRLFGVNIFK+P        NGKR+RE+E LSL+C KKQ
Sbjct: 316 PV-----VCSVQPVQMVRLFGVNIFKVPGNSHIEGCNGKRIREMELLSLDCIKKQ 365


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