BLASTX nr result

ID: Cimicifuga21_contig00023253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023253
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   305   4e-81
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   304   7e-81
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   303   9e-81
emb|CBI19298.3| unnamed protein product [Vitis vinifera]              299   2e-79
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   298   4e-79

>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  305 bits (780), Expect = 4e-81
 Identities = 139/184 (75%), Positives = 157/184 (85%)
 Frame = +3

Query: 3   VSLWEDAKAQMSIEVESWPYSFPASEDFPSSDQRGSISGTLLVQDRYVDDDYILADSAYV 182
           +SLWEDAK QM IEV+SWPY FPASED+  SDQRG++SG LLV+DR+V DDY  A+ AYV
Sbjct: 283 LSLWEDAKLQMLIEVQSWPYGFPASEDYQKSDQRGNVSGRLLVRDRFVSDDYTPANGAYV 342

Query: 183 GLALPGDVGSWQRESKGYQFWTRTDEYGNFTIEDIRAGDYNLYAWVPGFIGDYKYDVDIS 362
           GLALPGDVGSWQRE K YQFW R DE G F+I ++R GDYNLYAWVPG IGDY+YDV I+
Sbjct: 343 GLALPGDVGSWQRECKDYQFWNRADEGGYFSINNVRTGDYNLYAWVPGVIGDYRYDVSIT 402

Query: 363 ITPGYDINLGEIVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKVLVNQPEMRFRQ 542
           IT G DI +G++VYEPPRDGPTLWEIGIPDRSA EFYVPDPNPKYINK+ VN P+ RFRQ
Sbjct: 403 ITSGCDIEMGDLVYEPPRDGPTLWEIGIPDRSAEEFYVPDPNPKYINKLYVNHPD-RFRQ 461

Query: 543 YGLW 554
           YGLW
Sbjct: 462 YGLW 465


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  304 bits (778), Expect = 7e-81
 Identities = 137/184 (74%), Positives = 159/184 (86%)
 Frame = +3

Query: 3   VSLWEDAKAQMSIEVESWPYSFPASEDFPSSDQRGSISGTLLVQDRYVDDDYILADSAYV 182
           + LWEDAK QMS+EV+SWPYSFP SEDF   D RG++SG LLV++RY++DDY+ A  AYV
Sbjct: 302 LKLWEDAKLQMSVEVQSWPYSFPESEDFAKWDDRGNVSGRLLVRERYINDDYVSAKGAYV 361

Query: 183 GLALPGDVGSWQRESKGYQFWTRTDEYGNFTIEDIRAGDYNLYAWVPGFIGDYKYDVDIS 362
           GLA PGDVGSWQRE K YQFW R D+ G F++ +IRAGDYN+YAWVPGFIGDYKYDV I+
Sbjct: 362 GLAPPGDVGSWQRECKNYQFWARADDDGYFSVSNIRAGDYNVYAWVPGFIGDYKYDVVIN 421

Query: 363 ITPGYDINLGEIVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKVLVNQPEMRFRQ 542
           IT G DI+LG++VYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINK+ VN P+ +FRQ
Sbjct: 422 ITEGCDIDLGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPD-KFRQ 480

Query: 543 YGLW 554
           YGLW
Sbjct: 481 YGLW 484


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  303 bits (777), Expect = 9e-81
 Identities = 139/182 (76%), Positives = 155/182 (85%)
 Frame = +3

Query: 9   LWEDAKAQMSIEVESWPYSFPASEDFPSSDQRGSISGTLLVQDRYVDDDYILADSAYVGL 188
           LWEDAK QM+IEV+SWPYSFPASEDFPSSDQRG++SG LLVQD Y+ DDYILA  AYVGL
Sbjct: 301 LWEDAKEQMTIEVQSWPYSFPASEDFPSSDQRGNVSGRLLVQDGYISDDYILASCAYVGL 360

Query: 189 ALPGDVGSWQRESKGYQFWTRTDEYGNFTIEDIRAGDYNLYAWVPGFIGDYKYDVDISIT 368
           A PGDVGSWQRE K YQFWT+ D  G F I DIR GDYNLYAWVPGFIGDYK D  I+IT
Sbjct: 361 APPGDVGSWQRECKDYQFWTQADLGGYFCINDIRPGDYNLYAWVPGFIGDYKLDAVITIT 420

Query: 369 PGYDINLGEIVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKVLVNQPEMRFRQYG 548
           PG D+ +G+++YEPPRDGPTLWEIGIPDRSAAEFY PDPNP Y+NK+ +  P+ RFRQYG
Sbjct: 421 PGCDVFVGDLLYEPPRDGPTLWEIGIPDRSAAEFYSPDPNPTYVNKLFIGHPD-RFRQYG 479

Query: 549 LW 554
           LW
Sbjct: 480 LW 481


>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  299 bits (765), Expect = 2e-79
 Identities = 139/183 (75%), Positives = 155/183 (84%), Gaps = 1/183 (0%)
 Frame = +3

Query: 9   LWEDAKAQMSIEVESWPYSFPASEDFPSSDQRGSISGTLLVQDRYVDDDYILADSAYVGL 188
           LWEDAK QM+IEV+SWPYSFPASEDFPSSDQRG++SG LLVQD Y+ DDYILA  AYVGL
Sbjct: 313 LWEDAKEQMTIEVQSWPYSFPASEDFPSSDQRGNVSGRLLVQDGYISDDYILASCAYVGL 372

Query: 189 ALPGDVGSWQRESKGYQFWTRTDEYGNFTIEDIRAGDYNLYAWVPGFIGDYKYDVDISIT 368
           A PGDVGSWQRE K YQFWT+ D  G F I DIR GDYNLYAWVPGFIGDYK D  I+IT
Sbjct: 373 APPGDVGSWQRECKDYQFWTQADLGGYFCINDIRPGDYNLYAWVPGFIGDYKLDAVITIT 432

Query: 369 P-GYDINLGEIVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKVLVNQPEMRFRQY 545
           P G D+ +G+++YEPPRDGPTLWEIGIPDRSAAEFY PDPNP Y+NK+ +  P+ RFRQY
Sbjct: 433 PAGCDVFVGDLLYEPPRDGPTLWEIGIPDRSAAEFYSPDPNPTYVNKLFIGHPD-RFRQY 491

Query: 546 GLW 554
           GLW
Sbjct: 492 GLW 494


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  298 bits (763), Expect = 4e-79
 Identities = 137/184 (74%), Positives = 156/184 (84%)
 Frame = +3

Query: 3   VSLWEDAKAQMSIEVESWPYSFPASEDFPSSDQRGSISGTLLVQDRYVDDDYILADSAYV 182
           +SLWEDAK Q  IEV+SWPY FPASED+P S+QRGS+SG LLV+DR+V DDYI A+ AYV
Sbjct: 302 LSLWEDAKEQTEIEVQSWPYFFPASEDYPKSEQRGSVSGRLLVKDRFVSDDYISANGAYV 361

Query: 183 GLALPGDVGSWQRESKGYQFWTRTDEYGNFTIEDIRAGDYNLYAWVPGFIGDYKYDVDIS 362
           GLA  GDVGSWQRE K YQFW++ DE G F+I  IR GDYNLYAWVPGFIGDY+ DV I+
Sbjct: 362 GLAPQGDVGSWQRECKDYQFWSKADENGYFSINSIRTGDYNLYAWVPGFIGDYRCDVAIT 421

Query: 363 ITPGYDINLGEIVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKVLVNQPEMRFRQ 542
           IT G DIN+ ++VYEPPRDGPTLWEIGIPDRSAAEFY+PDPNP YINK+ VN P+ RFRQ
Sbjct: 422 ITSGCDINMHDLVYEPPRDGPTLWEIGIPDRSAAEFYIPDPNPMYINKLYVNHPD-RFRQ 480

Query: 543 YGLW 554
           YGLW
Sbjct: 481 YGLW 484


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