BLASTX nr result

ID: Cimicifuga21_contig00023224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023224
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE06271.1| cyclin A [Scutellaria baicalensis]                    241   4e-62
gb|ADA70359.1| mitotic cyclin A1-like protein [Persea americana]      240   8e-62
ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|2...   237   6e-61
ref|XP_003630475.1| Cyclin A-like protein [Medicago truncatula] ...   236   2e-60
ref|XP_003526649.1| PREDICTED: cyclin-A1-1-like [Glycine max]         234   7e-60

>dbj|BAE06271.1| cyclin A [Scutellaria baicalensis]
          Length = 496

 Score =  241 bits (615), Expect = 4e-62
 Identities = 119/158 (75%), Positives = 137/158 (86%)
 Frame = -3

Query: 476 SVSLDETMSTCDSLKSPDVEYIDNADASAVASIERKASNNFHISEHKDAASGNICKRDLH 297
           SVS+DE+MSTCDSLKSPDVE++D  D +AV SIERKASN   IS+H + A GN+CKRD  
Sbjct: 145 SVSMDESMSTCDSLKSPDVEHVDYIDVAAVDSIERKASNMLCISDHMEIA-GNLCKRDAL 203

Query: 296 MGLETSEKIVDVDSNHNDPQMCTTIACDIYKHLRASENKKRPSTDFMDGVQKDINASMRA 117
             LE+ +KIVDVD N +DPQ+C TIACDIYKHLRASE KKRP+T+FM+ VQKDINASMRA
Sbjct: 204 ASLESGDKIVDVDENLDDPQLCATIACDIYKHLRASEAKKRPATNFMERVQKDINASMRA 263

Query: 116 ILVDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNAMNR 3
           IL+DWLVEVAEEYRLVPDTLYLT+NYIDRYLSGN M+R
Sbjct: 264 ILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMDR 301


>gb|ADA70359.1| mitotic cyclin A1-like protein [Persea americana]
          Length = 479

 Score =  240 bits (613), Expect = 8e-62
 Identities = 118/160 (73%), Positives = 136/160 (85%), Gaps = 1/160 (0%)
 Frame = -3

Query: 479 GSVSLDETMSTCDSLKSPDVEYIDNADASAVASIERKASNNFHISEHKDAASGNICKR-D 303
           GSVSLDETMSTCDSLKSPD+EY+DN +ASAVAS+ER+   N +ISE  ++  G++ KR D
Sbjct: 126 GSVSLDETMSTCDSLKSPDIEYVDN-EASAVASLERRTCQNLYISEDANSKEGHVWKRSD 184

Query: 302 LHMGLETSEKIVDVDSNHNDPQMCTTIACDIYKHLRASENKKRPSTDFMDGVQKDINASM 123
           + M  E  +K++DVD NH DPQ+C +IACDIYKHLR  E KKRPSTDFM+ VQKDINASM
Sbjct: 185 ILMDKEIDDKLIDVDHNHKDPQLCASIACDIYKHLRMGETKKRPSTDFMETVQKDINASM 244

Query: 122 RAILVDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNAMNR 3
           RAILVDWLVEVAEEYRLVPDTLYLT+NYIDRYLSGN MNR
Sbjct: 245 RAILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNIMNR 284


>ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|222856098|gb|EEE93645.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  237 bits (605), Expect = 6e-61
 Identities = 114/158 (72%), Positives = 133/158 (84%)
 Frame = -3

Query: 476 SVSLDETMSTCDSLKSPDVEYIDNADASAVASIERKASNNFHISEHKDAASGNICKRDLH 297
           S+SLDE+MSTCDS KSP+VEYIDN +  A+ SI +K  +N +IS+H + A  N+C RD  
Sbjct: 142 SISLDESMSTCDSFKSPEVEYIDNNEIIAIDSINKKTLSNLYISDHLETAE-NVCIRDTR 200

Query: 296 MGLETSEKIVDVDSNHNDPQMCTTIACDIYKHLRASENKKRPSTDFMDGVQKDINASMRA 117
             +ET +KIV+VD N+ DPQ+C TIACDIYKHLRASE KKRPSTDFM+ +QKDINASMRA
Sbjct: 201 TDMETDDKIVNVDDNYQDPQLCATIACDIYKHLRASEMKKRPSTDFMERIQKDINASMRA 260

Query: 116 ILVDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNAMNR 3
           ILVDWLVEVAEEYRLVPDTLYLT+NYIDRYLSGN MNR
Sbjct: 261 ILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNR 298


>ref|XP_003630475.1| Cyclin A-like protein [Medicago truncatula]
           gi|355524497|gb|AET04951.1| Cyclin A-like protein
           [Medicago truncatula]
          Length = 531

 Score =  236 bits (601), Expect = 2e-60
 Identities = 114/160 (71%), Positives = 135/160 (84%)
 Frame = -3

Query: 482 GGSVSLDETMSTCDSLKSPDVEYIDNADASAVASIERKASNNFHISEHKDAASGNICKRD 303
           G SVS+DETMS+CDS KSPD+EY+DN+D  AV SIERK   + +IS+  +  SGNIC RD
Sbjct: 155 GMSVSMDETMSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISD-SNYPSGNICSRD 213

Query: 302 LHMGLETSEKIVDVDSNHNDPQMCTTIACDIYKHLRASENKKRPSTDFMDGVQKDINASM 123
           + + LE  EKIV++D+++ DPQ+C T ACDIYKHLRASE KKRPSTDFM+ +QKDIN SM
Sbjct: 214 ILVELEKGEKIVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSM 273

Query: 122 RAILVDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNAMNR 3
           RAIL+DWLVEVAEEYRLVPDTLYLT+NYIDRYLSGN MNR
Sbjct: 274 RAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNR 313


>ref|XP_003526649.1| PREDICTED: cyclin-A1-1-like [Glycine max]
          Length = 480

 Score =  234 bits (596), Expect = 7e-60
 Identities = 112/158 (70%), Positives = 132/158 (83%)
 Frame = -3

Query: 476 SVSLDETMSTCDSLKSPDVEYIDNADASAVASIERKASNNFHISEHKDAASGNICKRDLH 297
           SVS+DE+MS+CDS KSPD+EY+DN D +AV SIERK  +N +IS   D+  GNIC RD+ 
Sbjct: 134 SVSMDESMSSCDSFKSPDIEYVDNIDVAAVDSIERKTFSNLNIS---DSTEGNICSRDIL 190

Query: 296 MGLETSEKIVDVDSNHNDPQMCTTIACDIYKHLRASENKKRPSTDFMDGVQKDINASMRA 117
           + LE  E  V+VD+N+ DPQ+C T ACDIYKHLRASE KKRPSTDFM+ +QK+IN SMRA
Sbjct: 191 VELEKGENFVNVDNNYADPQLCATFACDIYKHLRASEAKKRPSTDFMERIQKEINPSMRA 250

Query: 116 ILVDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNAMNR 3
           IL+DWLVEVAEEYRLVPDTLYLT+NYIDRYLSGN MNR
Sbjct: 251 ILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNR 288


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