BLASTX nr result

ID: Cimicifuga21_contig00023219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023219
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335110.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002310507.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002517249.1| cysteine desulfurylase, putative [Ricinus co...    81   8e-14
ref|XP_002531673.1| cysteine desulfurylase, putative [Ricinus co...    80   1e-13

>ref|XP_002335110.1| predicted protein [Populus trichocarpa] gi|222832878|gb|EEE71355.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = +2

Query: 137 SFKMQEGGVDLQSEMTVSEKCSWLRSQLIGEGVEFDTPFGKRRLSYADHTASGRSLRHIE 316
           SF+  E GV   +  +  +K +WLRSQ++G+ VEFD+PFG+RRL+YADHTASGRSLR+IE
Sbjct: 63  SFRTLEIGVPKSN--STEKKLAWLRSQIVGDDVEFDSPFGRRRLTYADHTASGRSLRYIE 120

Query: 317 NFTVENV 337
           NF + NV
Sbjct: 121 NFIINNV 127


>ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|222838033|gb|EEE76398.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/49 (75%), Positives = 45/49 (91%)
 Frame = +2

Query: 191 EKCSWLRSQLIGEGVEFDTPFGKRRLSYADHTASGRSLRHIENFTVENV 337
           +K +WLRSQ+IG+ VEFD+PFGKRRL+YADHTASGRSLR+IENF + NV
Sbjct: 1   KKLAWLRSQIIGDDVEFDSPFGKRRLTYADHTASGRSLRYIENFIINNV 49


>ref|XP_002310507.1| predicted protein [Populus trichocarpa] gi|222853410|gb|EEE90957.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/49 (71%), Positives = 44/49 (89%)
 Frame = +2

Query: 191 EKCSWLRSQLIGEGVEFDTPFGKRRLSYADHTASGRSLRHIENFTVENV 337
           +K +WLRSQ++G  +EFD+PFGKRRL+YADHTASGRSLR+IENF + NV
Sbjct: 1   KKLAWLRSQIVGNDIEFDSPFGKRRLTYADHTASGRSLRYIENFIINNV 49


>ref|XP_002517249.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223543620|gb|EEF45149.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 633

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = +2

Query: 38  EDQATSLVIGTTSKQVANKTPPKT-NDDFGLQAVSFKMQEGGVDLQSEMTVSEKCSWLRS 214
           E  +TS+  G +    + +T     + D   ++ SF+  + GV     ++   + +WLRS
Sbjct: 17  EINSTSIRNGPSRSTNSTRTVSSALSSDLCNRSESFRTLDIGVP--KSISSERRLAWLRS 74

Query: 215 QLIGEGVEFDTPFGKRRLSYADHTASGRSLRHIENFTVENV 337
           Q+IG+ VEF++PFGKRRL+YADHTASGRSL +IENF + NV
Sbjct: 75  QIIGDDVEFESPFGKRRLTYADHTASGRSLHYIENFIINNV 115


>ref|XP_002531673.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223528704|gb|EEF30717.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 598

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/92 (45%), Positives = 59/92 (64%)
 Frame = +2

Query: 62  IGTTSKQVANKTPPKTNDDFGLQAVSFKMQEGGVDLQSEMTVSEKCSWLRSQLIGEGVEF 241
           +  TS +    T     ++   ++ SF+  E GV     ++  ++ +WLRSQ+IG+ VEF
Sbjct: 17  VSPTSTRTKTTTSSPLPNELCNRSESFRTLEIGVP--KSISSEKRLAWLRSQIIGDDVEF 74

Query: 242 DTPFGKRRLSYADHTASGRSLRHIENFTVENV 337
            +PFGKRRL+YADHTASGRSL +IENF   NV
Sbjct: 75  CSPFGKRRLTYADHTASGRSLHYIENFITNNV 106


Top