BLASTX nr result

ID: Cimicifuga21_contig00023186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023186
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-lik...   207   5e-52
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   205   3e-51
ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   202   2e-50
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   202   2e-50
ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab...   196   2e-48

>ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-like [Vitis vinifera]
          Length = 816

 Score =  207 bits (528), Expect = 5e-52
 Identities = 98/120 (81%), Positives = 110/120 (91%)
 Frame = -2

Query: 361 EEQEDGRLDYNLSVAKFAKKILHGHWLNDENDVDLRLTRLENLINRRPELANSVLLRQNP 182
           +E+ED RLD NLSVA F KKILHG WL+D NDVDLRL RLE+L++RRPELANSVLLRQNP
Sbjct: 322 DEEEDIRLDINLSVANFEKKILHGFWLHDFNDVDLRLARLEHLMDRRPELANSVLLRQNP 381

Query: 181 HNVEQWHRRVKLFEGNPMRQILTYTEAVRTVDPMKAIGKPHTLWVAFAKLYGDKKDISNA 2
           HNVEQWHRR+KLFEGNP +QILTYTEAVRTVDPMKA+GKPHTLWVAFAKLY + KD++NA
Sbjct: 382 HNVEQWHRRIKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYENHKDVANA 441


>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  205 bits (522), Expect = 3e-51
 Identities = 97/120 (80%), Positives = 109/120 (90%)
 Frame = -2

Query: 361 EEQEDGRLDYNLSVAKFAKKILHGHWLNDENDVDLRLTRLENLINRRPELANSVLLRQNP 182
           +E+ D RLD NLSVA F KKILHG WL+D NDVDLRL RLE+L++RRPELANSVLLRQNP
Sbjct: 322 DEEXDIRLDINLSVANFEKKILHGFWLHDFNDVDLRLARLEHLMDRRPELANSVLLRQNP 381

Query: 181 HNVEQWHRRVKLFEGNPMRQILTYTEAVRTVDPMKAIGKPHTLWVAFAKLYGDKKDISNA 2
           HNVEQWHRR+KLFEGNP +QILTYTEAVRTVDPMKA+GKPHTLWVAFAKLY + KD++NA
Sbjct: 382 HNVEQWHRRIKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYENHKDVANA 441


>ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 650

 Score =  202 bits (515), Expect = 2e-50
 Identities = 96/120 (80%), Positives = 108/120 (90%)
 Frame = -2

Query: 361 EEQEDGRLDYNLSVAKFAKKILHGHWLNDENDVDLRLTRLENLINRRPELANSVLLRQNP 182
           EE+ED RLD +LSV+KF KKIL G WL D+ND+DLRL RL++L++RRPELANSVLLRQNP
Sbjct: 59  EEEEDIRLDVDLSVSKFEKKILQGFWLYDDNDIDLRLARLDHLMDRRPELANSVLLRQNP 118

Query: 181 HNVEQWHRRVKLFEGNPMRQILTYTEAVRTVDPMKAIGKPHTLWVAFAKLYGDKKDISNA 2
           HNVEQWHRR+KLFEGNP RQILTYTEAVRTVDPMKA+GKPHTLWVAFAKLY   KD+ NA
Sbjct: 119 HNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYEAHKDLPNA 178


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  202 bits (515), Expect = 2e-50
 Identities = 96/120 (80%), Positives = 108/120 (90%)
 Frame = -2

Query: 361 EEQEDGRLDYNLSVAKFAKKILHGHWLNDENDVDLRLTRLENLINRRPELANSVLLRQNP 182
           EE+ED RLD +LSV+KF KKIL G WL D+ND+DLRL RL++L++RRPELANSVLLRQNP
Sbjct: 325 EEEEDIRLDVDLSVSKFEKKILQGFWLYDDNDIDLRLARLDHLMDRRPELANSVLLRQNP 384

Query: 181 HNVEQWHRRVKLFEGNPMRQILTYTEAVRTVDPMKAIGKPHTLWVAFAKLYGDKKDISNA 2
           HNVEQWHRR+KLFEGNP RQILTYTEAVRTVDPMKA+GKPHTLWVAFAKLY   KD+ NA
Sbjct: 385 HNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYEAHKDLPNA 444


>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
           lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
           ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score =  196 bits (497), Expect = 2e-48
 Identities = 92/119 (77%), Positives = 105/119 (88%)
 Frame = -2

Query: 361 EEQEDGRLDYNLSVAKFAKKILHGHWLNDENDVDLRLTRLENLINRRPELANSVLLRQNP 182
           +E ED RL++NLSV +  +KIL+G WLND+NDVDLRL RLE L+NRRP LANSVLLRQNP
Sbjct: 323 DEDEDVRLNFNLSVKELQRKILNGFWLNDDNDVDLRLARLEELMNRRPALANSVLLRQNP 382

Query: 181 HNVEQWHRRVKLFEGNPMRQILTYTEAVRTVDPMKAIGKPHTLWVAFAKLYGDKKDISN 5
           HNVEQWHRRVK+FEGN  +QILTYTEAVRTVDPMKA+GKPHTLWVAFAKLY + KD+ N
Sbjct: 383 HNVEQWHRRVKIFEGNAAKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYENHKDLVN 441


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