BLASTX nr result
ID: Cimicifuga21_contig00023161
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00023161 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine... 66 3e-09 ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine... 64 1e-08 gb|ACI32851.1| S locus F-box protein 1, partial [Prunus spinosa] 58 9e-07 ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicag... 57 2e-06 ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550... 57 2e-06 >ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max] Length = 394 Score = 66.2 bits (160), Expect = 3e-09 Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 5/91 (5%) Frame = -1 Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYLA----FGFD 92 L+ SC+G++C+ N + ++A WNP+ +Q R LP PVPRR H ++ A FGFD Sbjct: 93 LLGSCNGLLCISNV-ADDIAFWNPSLRQHRILPYLPVPRR--RHPDTTLFAARVCGFGFD 149 Query: 91 VKTNDYKVVKIIMYTEGMDLPY-SQVEVYNL 2 KT DYK+V+I + + D + SQV++Y L Sbjct: 150 HKTRDYKLVRISYFVDLHDRSFDSQVKLYTL 180 >ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max] Length = 392 Score = 63.9 bits (154), Expect = 1e-08 Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 5/91 (5%) Frame = -1 Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYLA----FGFD 92 L+ SC+G++C+ N + ++A WNP+ +Q R LP P+PRR LH ++ A FGFD Sbjct: 93 LLGSCNGLLCISNV-ADDIAFWNPSLRQHRILPSLPLPRRR-LHPDTTLFAARVYGFGFD 150 Query: 91 VKTNDYKVVKIIMYTEGMDLPY-SQVEVYNL 2 + DYK+V+I + + D + SQV++Y L Sbjct: 151 HTSPDYKLVRISYFVDLQDRSFDSQVKLYTL 181 >gb|ACI32851.1| S locus F-box protein 1, partial [Prunus spinosa] Length = 245 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%) Frame = -1 Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYLAFGFDVKTN 80 ++ CDG+ICL + SG + L NPA +++ LPES +P + FG+D K+N Sbjct: 13 IIGHCDGVICL-SACSGNLVLCNPAINEIKLLPESCLPDWWACA------MGFGYDPKSN 65 Query: 79 DYKVVKIIMYTEGMD--LPYSQVEVYNL 2 DYKV +I Y +D +P +VE+Y + Sbjct: 66 DYKVSRIASYQAKIDGLIPPPRVEIYTV 93 >ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicago truncatula] gi|355503755|gb|AES84958.1| F-box/kelch-repeat protein, partial [Medicago truncatula] Length = 209 Score = 57.0 bits (136), Expect = 2e-06 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Frame = -1 Query: 244 DGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYL-AFGFDVKTNDYKV 68 +GI+CLY V LWNPAT++ + LP SP PVL+ Y+ FG+D +DYKV Sbjct: 123 NGIVCLYQGREPVVILWNPATEEYKVLPPSPT-ESPVLYEEVYYYVHGFGYDHVRDDYKV 181 Query: 67 VKIIMYTEGMDLP 29 ++ + Y+ +D+P Sbjct: 182 IRYVSYS--LDVP 192 >ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1| F-box protein [Medicago truncatula] Length = 381 Score = 57.0 bits (136), Expect = 2e-06 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Frame = -1 Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNI----IYLAFGFD 92 LV SC+G++CL+++ GE+A WNP + R +P P+P NI FGFD Sbjct: 89 LVGSCNGLLCLFSD--GEIAFWNPTICKHRIIPSLPIPTPQHSEPNNIYADFCVYGFGFD 146 Query: 91 VKTNDYKVVKIIMYTE 44 T+DYK++ I + E Sbjct: 147 PLTDDYKLLTIFCFVE 162