BLASTX nr result

ID: Cimicifuga21_contig00023161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023161
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    66   3e-09
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    64   1e-08
gb|ACI32851.1| S locus F-box protein 1, partial [Prunus spinosa]       58   9e-07
ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicag...    57   2e-06
ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550...    57   2e-06

>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
 Frame = -1

Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYLA----FGFD 92
           L+ SC+G++C+ N  + ++A WNP+ +Q R LP  PVPRR   H    ++ A    FGFD
Sbjct: 93  LLGSCNGLLCISNV-ADDIAFWNPSLRQHRILPYLPVPRR--RHPDTTLFAARVCGFGFD 149

Query: 91  VKTNDYKVVKIIMYTEGMDLPY-SQVEVYNL 2
            KT DYK+V+I  + +  D  + SQV++Y L
Sbjct: 150 HKTRDYKLVRISYFVDLHDRSFDSQVKLYTL 180


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
 Frame = -1

Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYLA----FGFD 92
           L+ SC+G++C+ N  + ++A WNP+ +Q R LP  P+PRR  LH    ++ A    FGFD
Sbjct: 93  LLGSCNGLLCISNV-ADDIAFWNPSLRQHRILPSLPLPRRR-LHPDTTLFAARVYGFGFD 150

Query: 91  VKTNDYKVVKIIMYTEGMDLPY-SQVEVYNL 2
             + DYK+V+I  + +  D  + SQV++Y L
Sbjct: 151 HTSPDYKLVRISYFVDLQDRSFDSQVKLYTL 181


>gb|ACI32851.1| S locus F-box protein 1, partial [Prunus spinosa]
          Length = 245

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = -1

Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYLAFGFDVKTN 80
           ++  CDG+ICL +  SG + L NPA  +++ LPES +P            + FG+D K+N
Sbjct: 13  IIGHCDGVICL-SACSGNLVLCNPAINEIKLLPESCLPDWWACA------MGFGYDPKSN 65

Query: 79  DYKVVKIIMYTEGMD--LPYSQVEVYNL 2
           DYKV +I  Y   +D  +P  +VE+Y +
Sbjct: 66  DYKVSRIASYQAKIDGLIPPPRVEIYTV 93


>ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicago truncatula]
           gi|355503755|gb|AES84958.1| F-box/kelch-repeat protein,
           partial [Medicago truncatula]
          Length = 209

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = -1

Query: 244 DGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNIIYL-AFGFDVKTNDYKV 68
           +GI+CLY      V LWNPAT++ + LP SP    PVL+     Y+  FG+D   +DYKV
Sbjct: 123 NGIVCLYQGREPVVILWNPATEEYKVLPPSPT-ESPVLYEEVYYYVHGFGYDHVRDDYKV 181

Query: 67  VKIIMYTEGMDLP 29
           ++ + Y+  +D+P
Sbjct: 182 IRYVSYS--LDVP 192


>ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1|
           F-box protein [Medicago truncatula]
          Length = 381

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = -1

Query: 259 LVNSCDGIICLYNEDSGEVALWNPATKQLRPLPESPVPRRPVLHIRNI----IYLAFGFD 92
           LV SC+G++CL+++  GE+A WNP   + R +P  P+P        NI        FGFD
Sbjct: 89  LVGSCNGLLCLFSD--GEIAFWNPTICKHRIIPSLPIPTPQHSEPNNIYADFCVYGFGFD 146

Query: 91  VKTNDYKVVKIIMYTE 44
             T+DYK++ I  + E
Sbjct: 147 PLTDDYKLLTIFCFVE 162


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