BLASTX nr result

ID: Cimicifuga21_contig00023160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023160
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18916.3| unnamed protein product [Vitis vinifera]              124   3e-26
ref|XP_002285901.1| PREDICTED: uncharacterized protein LOC100242...   124   3e-26
ref|NP_001077832.1| LYR family of Fe/S cluster biogenesis protei...   121   1e-25
ref|XP_002889055.1| hypothetical protein ARALYDRAFT_316527 [Arab...   119   6e-25
dbj|BAJ87303.1| predicted protein [Hordeum vulgare subsp. vulgar...   119   8e-25

>emb|CBI18916.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  124 bits (310), Expect = 3e-26
 Identities = 60/81 (74%), Positives = 69/81 (85%)
 Frame = +2

Query: 332 MVPPLDLQAFILRSRVLKFYRQALRISRRAPSHSKVELRQEIRQEMEKNRQCSDKQRIRF 511
           MV  LDLQ F+LR+RVLK YRQALR++ RAP H++ ELRQ +RQEME NR C+DKQRIRF
Sbjct: 60  MVLLLDLQDFLLRARVLKLYRQALRVAGRAPEHARAELRQTVRQEMENNRNCNDKQRIRF 119

Query: 512 LISEGMERLKSLDEMLDMQGH 574
           LISEG+ RLK LDEMLDMQGH
Sbjct: 120 LISEGLARLKGLDEMLDMQGH 140


>ref|XP_002285901.1| PREDICTED: uncharacterized protein LOC100242024 [Vitis vinifera]
          Length = 81

 Score =  124 bits (310), Expect = 3e-26
 Identities = 60/81 (74%), Positives = 69/81 (85%)
 Frame = +2

Query: 332 MVPPLDLQAFILRSRVLKFYRQALRISRRAPSHSKVELRQEIRQEMEKNRQCSDKQRIRF 511
           MV  LDLQ F+LR+RVLK YRQALR++ RAP H++ ELRQ +RQEME NR C+DKQRIRF
Sbjct: 1   MVLLLDLQDFLLRARVLKLYRQALRVAGRAPEHARAELRQTVRQEMENNRNCNDKQRIRF 60

Query: 512 LISEGMERLKSLDEMLDMQGH 574
           LISEG+ RLK LDEMLDMQGH
Sbjct: 61  LISEGLARLKGLDEMLDMQGH 81


>ref|NP_001077832.1| LYR family of Fe/S cluster biogenesis protein [Arabidopsis
           thaliana] gi|8778812|gb|AAF79817.1|AC007396_17 T4O12.27
           [Arabidopsis thaliana] gi|62321766|dbj|BAD95391.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|98961727|gb|ABF59193.1| unknown protein [Arabidopsis
           thaliana] gi|332197671|gb|AEE35792.1| LYR family of Fe/S
           cluster biogenesis protein [Arabidopsis thaliana]
          Length = 80

 Score =  121 bits (304), Expect = 1e-25
 Identities = 57/77 (74%), Positives = 69/77 (89%)
 Frame = +2

Query: 344 LDLQAFILRSRVLKFYRQALRISRRAPSHSKVELRQEIRQEMEKNRQCSDKQRIRFLISE 523
           LDLQ+FILR+RVLK YRQAL+I+ RAP H + EL+Q +RQEMEKNR C+DKQ+IR+LISE
Sbjct: 4   LDLQSFILRARVLKLYRQALKIAHRAPVHVRGELKQTVRQEMEKNRDCNDKQKIRYLISE 63

Query: 524 GMERLKSLDEMLDMQGH 574
           G+ER+K LDEMLDMQGH
Sbjct: 64  GLERIKGLDEMLDMQGH 80


>ref|XP_002889055.1| hypothetical protein ARALYDRAFT_316527 [Arabidopsis lyrata subsp.
           lyrata] gi|297334896|gb|EFH65314.1| hypothetical protein
           ARALYDRAFT_316527 [Arabidopsis lyrata subsp. lyrata]
          Length = 80

 Score =  119 bits (298), Expect = 6e-25
 Identities = 55/77 (71%), Positives = 68/77 (88%)
 Frame = +2

Query: 344 LDLQAFILRSRVLKFYRQALRISRRAPSHSKVELRQEIRQEMEKNRQCSDKQRIRFLISE 523
           LDLQ+FILR+RVLK YRQAL++++RAP H + EL+Q +R EMEKNR C DKQ+IR+LISE
Sbjct: 4   LDLQSFILRARVLKLYRQALKVAQRAPVHVRGELKQTVRHEMEKNRDCDDKQKIRYLISE 63

Query: 524 GMERLKSLDEMLDMQGH 574
           G+ER+K LDEMLDMQGH
Sbjct: 64  GLERIKGLDEMLDMQGH 80


>dbj|BAJ87303.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326513794|dbj|BAJ87915.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 82

 Score =  119 bits (297), Expect = 8e-25
 Identities = 56/77 (72%), Positives = 69/77 (89%)
 Frame = +2

Query: 344 LDLQAFILRSRVLKFYRQALRISRRAPSHSKVELRQEIRQEMEKNRQCSDKQRIRFLISE 523
           LDL+AFILR+RVLKFYRQALR++RRAP H++ ELRQ +R E+EKNR C DKQ+I+FLISE
Sbjct: 5   LDLRAFILRARVLKFYRQALRMTRRAPEHARDELRQTVRAEIEKNRHCDDKQKIKFLISE 64

Query: 524 GMERLKSLDEMLDMQGH 574
           G++RLK LDEMLDM G+
Sbjct: 65  GLQRLKGLDEMLDMTGN 81


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