BLASTX nr result

ID: Cimicifuga21_contig00023144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023144
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267682.1| PREDICTED: uncharacterized protein LOC100248...    98   2e-18
emb|CAN72342.1| hypothetical protein VITISV_029506 [Vitis vinifera]    98   2e-18
emb|CAN66127.1| hypothetical protein VITISV_002395 [Vitis vinifera]    88   1e-15
emb|CAN64150.1| hypothetical protein VITISV_001531 [Vitis vinifera]    88   1e-15
ref|XP_002526825.1| conserved hypothetical protein [Ricinus comm...    85   1e-14

>ref|XP_002267682.1| PREDICTED: uncharacterized protein LOC100248770 [Vitis vinifera]
          Length = 698

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 50/206 (24%)
 Frame = +3

Query: 3   HLSREKELDTFHSHDDE---------NVNRIES-----------------------DRRR 86
           ++S + E++T+H+ DD+         NV RI+                        DRRR
Sbjct: 73  YISGDSEINTYHAQDDDSKDELDFLTNVTRIDKSKVLEFGQGSGVHGGDSRYWERDDRRR 132

Query: 87  DH------VGHN--------VDDLELVDGNDNVNEDV---KKSGGTDGSGFGQDMEGGRN 215
           D       + H+        +D   +V    N NE +       G+ G G G   E GR+
Sbjct: 133 DEDYNEEALEHSTMSTRDGSIDKSRVVVKGKNDNEKIFFDNSIKGSGGRGSGLYNEAGRD 192

Query: 216 ELKLYEAEFEASLKNVGQSTQENNYRNNISSNGVVELQNEEDDSDGEYDDAIDSQDARVA 395
           ELK+YEAE+EASLKNVGQS  E+  RN +  +    + NEE D+D EYDD IDS DAR+ 
Sbjct: 193 ELKIYEAEYEASLKNVGQSINEHGDRNKLFDDAGFGMHNEEMDADDEYDDGIDSHDARMV 252

Query: 396 DHEDVRNKTEN-QIDDIGESHGEDNA 470
           + +D  N  EN  I ++ +SH   ++
Sbjct: 253 EDDD--NGHENGDISNVAKSHDSSDS 276


>emb|CAN72342.1| hypothetical protein VITISV_029506 [Vitis vinifera]
          Length = 692

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 50/206 (24%)
 Frame = +3

Query: 3   HLSREKELDTFHSHDDE---------NVNRIES-----------------------DRRR 86
           ++S + E++T+H+ DD+         NV RI+                        DRRR
Sbjct: 73  YISGDSEINTYHAQDDDSKDELDFLTNVTRIDKSKVLEFGQGSGVHGGDSRYWERDDRRR 132

Query: 87  DH------VGHN--------VDDLELVDGNDNVNEDV---KKSGGTDGSGFGQDMEGGRN 215
           D       + H+        +D   +V    N NE +       G+ G G G   E GR+
Sbjct: 133 DEDYNEEALEHSTMSTRDGSIDKSRVVVKGKNDNEKIFFDNSIKGSGGRGSGLYNEAGRD 192

Query: 216 ELKLYEAEFEASLKNVGQSTQENNYRNNISSNGVVELQNEEDDSDGEYDDAIDSQDARVA 395
           ELK+YEAE+EASLKNVGQS  E+  RN +  +    + NEE D+D EYDD IDS DAR+ 
Sbjct: 193 ELKIYEAEYEASLKNVGQSINEHGDRNKLFDDAGFGMHNEEMDADDEYDDGIDSHDARMV 252

Query: 396 DHEDVRNKTEN-QIDDIGESHGEDNA 470
           + +D  N  EN  I ++ +SH   ++
Sbjct: 253 EDDD--NGHENGDISNVAKSHDSSDS 276


>emb|CAN66127.1| hypothetical protein VITISV_002395 [Vitis vinifera]
          Length = 345

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 63/155 (40%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
 Frame = +3

Query: 9   SREKELDTFHSHDDENVNRIESDRR--RDHVGHNVDDLELVDGNDNVNEDV---KKSGGT 173
           SR  E D     +D N   +E      RD    ++D   +V    N NE +       G+
Sbjct: 25  SRYWERDDRRRDEDYNEKALEHSTMSIRDR---SIDKSRVVVKGKNDNEKIFFDNSIRGS 81

Query: 174 DGSGFGQDMEGGRNELKLYEAEFEASLKNVGQSTQENNYRNNISSNGVVELQNEEDDSDG 353
            G G G   E GR+ELK+ EAE+EASLKN+GQS  E+  RN  S +  + + NEE D D 
Sbjct: 82  GGRGTGLYNEVGRDELKINEAEYEASLKNIGQSINEHGDRNKQSDDAGLGMHNEEMDVDD 141

Query: 354 EYDDAIDSQDARVADHEDVRNKTEN-QIDDIGESH 455
           EYDD IDS DAR+   ED  N  EN  I ++ +SH
Sbjct: 142 EYDDGIDSHDARMV--EDGDNGHENGDISNVAKSH 174


>emb|CAN64150.1| hypothetical protein VITISV_001531 [Vitis vinifera]
          Length = 319

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 62/155 (40%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
 Frame = +3

Query: 9   SREKELDTFHSHDDENVNRIESDRR--RDHVGHNVDDLELVDGNDNVNEDV---KKSGGT 173
           SR  E D     +D N   +E      RD    ++D   +V    N NE +     + G+
Sbjct: 5   SRYWERDDRRRDEDYNEEALEHSTMSIRDR---SIDKSCVVVKGKNDNEKIFFDNSTKGS 61

Query: 174 DGSGFGQDMEGGRNELKLYEAEFEASLKNVGQSTQENNYRNNISSNGVVELQNEEDDSDG 353
            G G G   E GR+ELK+YE E+EASLKNVGQS  E+  RN  S +    + NE+ D+D 
Sbjct: 62  GGRGNGLYNEAGRDELKIYEVEYEASLKNVGQSINEHGDRNKPSDDAGFGMHNEKMDADD 121

Query: 354 EYDDAIDSQDARVADHEDVRNKTEN-QIDDIGESH 455
           EYDD IDS +AR+   ED  N  EN  I ++ +SH
Sbjct: 122 EYDDGIDSHEARMV--EDGDNGHENGDISNVAKSH 154


>ref|XP_002526825.1| conserved hypothetical protein [Ricinus communis]
           gi|223533829|gb|EEF35560.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 722

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
 Frame = +3

Query: 15  EKELDTFHSHDDENVNRIESDRRRDHVGHNVDDLELVDGNDNVNEDVKKSGGTDGSGFGQ 194
           ++  D  ++ DD + +  E++      GHN+  +++ +G +  +++   S G D  G G 
Sbjct: 147 DRRRDGDYNEDDVDHDSKEAEDESTEKGHNL--VKMKNGKEKTSQN-DPSKGLDQRGTGL 203

Query: 195 DMEGGRNELKLYEAEFEASLKNVGQSTQENNYRNNISSNGVVELQNEEDDSDGEYDDAID 374
             E GR ELK+YEAE+EASLKN GQS  +N  +     +   E QNE  D+D EYDD ID
Sbjct: 204 YNEDGRKELKMYEAEYEASLKNAGQSRNKNEIKPRALDD---EEQNEGVDTDNEYDDGID 260

Query: 375 SQDARVADHED----------VRNKTE---------NQIDDIGESHGEDNAKESEKAFTI 497
           S D  V D+ D          VR  ++         N  D   ++  +DN + SE    I
Sbjct: 261 SHDPHVEDYGDSDHDNGHQASVRISSDEDGREFSNFNDADTKDQNVAKDNHEVSE---NI 317

Query: 498 ISMDETPKTLDEVITNSR 551
                  +TLD V  NS+
Sbjct: 318 SDKSLNIRTLDNVDNNSQ 335


Top