BLASTX nr result

ID: Cimicifuga21_contig00023141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023141
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187250.1| leucine-rich repeat-containing protein [Arabido...    71   1e-10
ref|XP_002281432.1| PREDICTED: probable LRR receptor-like serine...    70   2e-10
emb|CAN75980.1| hypothetical protein VITISV_012184 [Vitis vinifera]    70   2e-10
ref|XP_002311609.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002517208.1| serine-threonine protein kinase, plant-type,...    65   7e-09

>ref|NP_187250.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
           gi|6671958|gb|AAF23217.1|AC013454_4 hypothetical protein
           [Arabidopsis thaliana] gi|30102730|gb|AAP21283.1|
           At3g05990 [Arabidopsis thaliana]
           gi|110743247|dbj|BAE99514.1| hypothetical protein
           [Arabidopsis thaliana] gi|332640806|gb|AEE74327.1|
           leucine-rich repeat-containing protein [Arabidopsis
           thaliana]
          Length = 517

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = +2

Query: 122 MEFLYVLCFFIFSLITSTLSQPSPPPKGLLIDCGATVSSTIEDRIWVPDAGYIAAGXXXX 301
           M  L +L   +FSL++S+LSQPSPP   +LIDCGA+ SS I+ R W PD  ++++G    
Sbjct: 1   MSPLLLLLLTVFSLLSSSLSQPSPP-SAILIDCGASSSSVIDGRQWQPDETFVSSGTPKN 59

Query: 302 XXXXXXXXXXXXVRSFPLS--SRLQKFCYVV 388
                       VRSFPLS      KFCYV+
Sbjct: 60  VSDQVLDEILFTVRSFPLSLDGTHHKFCYVM 90


>ref|XP_002281432.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g67720 [Vitis vinifera]
           gi|297737017|emb|CBI26218.3| unnamed protein product
           [Vitis vinifera]
          Length = 514

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +2

Query: 122 MEFLYVLCFFIFSLITSTLSQPSPPPKGLLIDCGATVSSTIEDRIWVPDAGYIAAGXXXX 301
           M FL ++  F+FSL+    SQ S  P+G+ IDCGATV+S I+ R W+PDA Y+++G    
Sbjct: 1   MSFLSLI--FLFSLLNLAQSQ-SQSPRGVFIDCGATVASLIDGRQWLPDATYVSSGTAKN 57

Query: 302 XXXXXXXXXXXXVRSFPLSSRL-QKFCYVV 388
                       VRSFPL     +KFCYVV
Sbjct: 58  LTDPNVAPILSTVRSFPLQGNTNKKFCYVV 87


>emb|CAN75980.1| hypothetical protein VITISV_012184 [Vitis vinifera]
          Length = 503

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +2

Query: 122 MEFLYVLCFFIFSLITSTLSQPSPPPKGLLIDCGATVSSTIEDRIWVPDAGYIAAGXXXX 301
           M FL ++  F+FSL+    SQ S  P+G+ IDCGATV+S I+ R W+PDA Y+++G    
Sbjct: 1   MSFLSLI--FLFSLLNLAQSQ-SQSPRGVFIDCGATVASLIDGRQWLPDATYVSSGTAKN 57

Query: 302 XXXXXXXXXXXXVRSFPL-SSRLQKFCYVV 388
                       VRSFPL  +  +KFCYVV
Sbjct: 58  LTDPNVAPILSTVRSFPLQGNTXKKFCYVV 87


>ref|XP_002311609.1| predicted protein [Populus trichocarpa] gi|222851429|gb|EEE88976.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +2

Query: 137 VLCFFIFSLITSTLSQPSPPPKGLLIDCGATVSSTIEDRIWVPDAGYIAAGXXXXXXXXX 316
           ++   +FS++  + SQP PP +  LIDCGATV STI    W+ D GYI  G         
Sbjct: 7   IILISVFSILFLSTSQP-PPLRRTLIDCGATVPSTINGLQWILDTGYITGGTAKNLTVPV 65

Query: 317 XXXXXXXVRSFPLSSRL-QKFCYVV 388
                  VRSFPL + L +KFCYVV
Sbjct: 66  LNHTLSTVRSFPLQNNLRRKFCYVV 90


>ref|XP_002517208.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223543843|gb|EEF45371.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 557

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = +2

Query: 152 IFSLITSTLSQPSPPPKGLLIDCGATVSSTIEDRIWVPDAGYIAAGXXXXXXXXXXXXXX 331
           + SL++ +LSQ SPP +G  I+CGAT  ST   R W+PD+G+I+ G              
Sbjct: 8   LLSLLSLSLSQ-SPPLRGTFINCGATAPSTFSGREWLPDSGFISQGTSKNLTIPVLAPIL 66

Query: 332 XXVRSFPLSSRL-QKFCYVV 388
             VRSFPL++ L +K CYVV
Sbjct: 67  STVRSFPLTNNLHRKLCYVV 86


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