BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023132
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535311.1| conserved hypothetical protein [Ricinus comm...    49   4e-10
ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    69   9e-10
ref|XP_002531802.1| conserved hypothetical protein [Ricinus comm...    59   1e-06

>ref|XP_002535311.1| conserved hypothetical protein [Ricinus communis]
           gi|223523476|gb|EEF27072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 63

 Score = 48.5 bits (114), Expect(2) = 4e-10
 Identities = 23/30 (76%), Positives = 26/30 (86%), Gaps = 2/30 (6%)
 Frame = -1

Query: 352 LRWSS--LIFPNVQSCSGLRKEHRPSALNE 269
           +RWSS  + FPNV+SCSGLRKEHRPS LNE
Sbjct: 34  VRWSSRSVGFPNVKSCSGLRKEHRPSTLNE 63



 Score = 41.6 bits (96), Expect(2) = 4e-10
 Identities = 24/37 (64%), Positives = 26/37 (70%)
 Frame = -3

Query: 455 MLLPADQAATLLVIGVSGLPLTFGSDKSSPLGRFAQV 345
           MLLPA  AA      +S  PL+FGSDKSSP GRFAQV
Sbjct: 1   MLLPASDAAR---DRLSFKPLSFGSDKSSPFGRFAQV 34


>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 37/56 (66%), Positives = 37/56 (66%)
 Frame = +2

Query: 464 MGQRIKRFYFVPRDPPQVGFESRVMGDYPARFGEHL*SALVNGSPLQERSGSSHGG 631
           MGQRIKRF FV RD PQVGFESRVMGDYPARFGE               SG SHGG
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE---------------SGYSHGG 41


>ref|XP_002531802.1| conserved hypothetical protein [Ricinus communis]
           gi|223528568|gb|EEF30590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = -1

Query: 601 QGASIHQRRLQVLSEPCWIVTHHTALKPNLW-WIPGDKVKALDPLPHTLRCSSPPIK 434
           +G SI Q RL+VL EPC I+T++T           GD VKALDPLPHTL+ SS PIK
Sbjct: 16  RGPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLKGSSTPIK 72