BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023125
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-58
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263...   228   2e-57
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati...   220   5e-55
gb|AFK36549.1| unknown [Lotus japonicus]                              217   6e-54
ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790...   215   2e-53

>ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|222841602|gb|EEE79149.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  231 bits (588), Expect = 4e-58
 Identities = 117/197 (59%), Positives = 131/197 (66%), Gaps = 3/197 (1%)
 Frame = +2

Query: 227 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLDQ 406
           MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQS+IDQRIKEHL Q
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60

Query: 407 TANFQQAGAAFSS--FPQRPR-PILPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGV 577
           TA FQQ GAA++     QRPR P+LPT                              Y  
Sbjct: 61  TAAFQQVGAAYNQHLMVQRPRLPVLPTPVMPIGGNNAPLFPGMRPPVLPRPMPGAPGYMN 120

Query: 578 APMMPSMISPPGATSIPMQVNGLPRPPTFSAPTTTPGIAAVPTSNGAPPSSIPVMYQANP 757
            PMMP M++PPGA S+P Q+NG+PRPPT  A    PG  A PT +G P    PV YQAN 
Sbjct: 121 PPMMPPMMAPPGAPSLPGQMNGIPRPPTMIAQPNVPGSTAAPTPSGPPSMGPPVTYQANQ 180

Query: 758 TAPTSGGFDSYNTNASS 808
            A TSGGFDS+N NA++
Sbjct: 181 AATTSGGFDSFNVNAAA 197


>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
           gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
           small nuclear ribonucleoprotein C; Short=U1 snRNP C;
           Short=U1-C; Short=U1C
          Length = 213

 Score =  228 bits (581), Expect = 2e-57
 Identities = 121/206 (58%), Positives = 132/206 (64%), Gaps = 14/206 (6%)
 Frame = +2

Query: 227 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLDQ 406
           MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRSYYQQFEEQQTQSLIDQRIKEHL Q
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 407 TANFQQAGAAFSSF-------PQRPR-PILPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 562
           TA FQQ GAA++         P RPR P+LPT                            
Sbjct: 61  TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR 120

Query: 563 XXYGV-----APMMPSMISPPGATSIPM-QVNGLPRPPTFSAPTTTPGIAAVPTSNGAPP 724
              G      AP MPSM++PPGA S+PM  +N LPRPPT + P   PG  + PTS GAP 
Sbjct: 121 PVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTPTSGGAPS 180

Query: 725 SSIPVMYQANPTAPTSGGFDSYNTNA 802
                MYQANP  PTSGGFDS+N NA
Sbjct: 181 MMTQPMYQANPAGPTSGGFDSFNINA 206


>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
           gi|223540083|gb|EEF41660.1| U1 small nuclear
           ribonucleoprotein C, putative [Ricinus communis]
          Length = 206

 Score =  220 bits (561), Expect = 5e-55
 Identities = 116/197 (58%), Positives = 126/197 (63%), Gaps = 8/197 (4%)
 Frame = +2

Query: 227 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLDQ 406
           MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRSYYQQFEEQQTQSLIDQRIKEHL Q
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 407 TANFQQAGAAFSS-FPQRPR-PILPT------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 562
            A FQQ GAA++    QRPR P+LPT                                  
Sbjct: 61  AAAFQQVGAAYNQHLLQRPRLPVLPTPMMPIPGSAQLPANTPLMPGIRPPPVLPRPVPAA 120

Query: 563 XXYGVAPMMPSMISPPGATSIPMQVNGLPRPPTFSAPTTTPGIAAVPTSNGAPPSSIPVM 742
             Y  +P MP M++PPGA S+P QVNGLPRPP    P T PG AAV   +GAP    P  
Sbjct: 121 PGYMSSPAMPPMVAPPGAPSLPGQVNGLPRPPMSIPPATVPGSAAVAPPSGAPSMVPPAS 180

Query: 743 YQANPTAPTSGGFDSYN 793
           YQ NP  PTS GFDS+N
Sbjct: 181 YQTNPAPPTSAGFDSFN 197


>gb|AFK36549.1| unknown [Lotus japonicus]
          Length = 192

 Score =  217 bits (552), Expect = 6e-54
 Identities = 111/198 (56%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
 Frame = +2

Query: 227 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLDQ 406
           MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL Q
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 407 TANFQQAGAAFSSF----PQRPRPILPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYG 574
            A FQQ G A++      P  P P+LP                                G
Sbjct: 61  AAAFQQVGVAYNHLMVPRPGGP-PLLPMPQPRFPMPGNVQMPGGQPLMP----------G 109

Query: 575 VAPMMPSMISPPGATSIPMQVNGLPRPPTFSAPTTTPGIAAVPTSNGAPPSSIPVMYQAN 754
           + P+MP     PGA  +P Q+N +PRPP+F+ PTT PG  A P SNGAP      MYQ N
Sbjct: 110 MRPLMPLPRPVPGAPHVPGQLNAIPRPPSFAPPTTAPGSTAAPASNGAPSMVSSAMYQPN 169

Query: 755 PTAPTSGGFDSYNTNASS 808
           P+AP+SGG+D+YN NA +
Sbjct: 170 PSAPSSGGYDNYNANAQA 187


>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
          Length = 206

 Score =  215 bits (548), Expect = 2e-53
 Identities = 111/201 (55%), Positives = 127/201 (63%), Gaps = 7/201 (3%)
 Frame = +2

Query: 227 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLDQ 406
           MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL Q
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 407 TANFQQAGAAFSS-FPQRPR--PILP----TXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 565
            A FQQ G A++    QRP   P+LP                                  
Sbjct: 61  AAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRPPGAP 120

Query: 566 XYGVAPMMPSMISPPGATSIPMQVNGLPRPPTFSAPTTTPGIAAVPTSNGAPPSSIPVMY 745
            Y  A  MP M+ PPGA  +P Q+N +PRPP+ + P T PG  A P SNGAP      MY
Sbjct: 121 GYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAMY 180

Query: 746 QANPTAPTSGGFDSYNTNASS 808
           QANP AP+SG +D+YNT+A +
Sbjct: 181 QANPPAPSSGSYDNYNTSAQA 201