BLASTX nr result
ID: Cimicifuga21_contig00023110
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00023110 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4... 184 8e-45 pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dw... 184 8e-45 ref|NP_195463.1| hydrolase, alpha/beta fold family protein [Arab... 184 8e-45 ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p... 183 1e-44 gb|AFK41000.1| unknown [Medicago truncatula] 182 2e-44 >pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4HRY|A Chain A, The Structure Of Arabidopsis Thaliana Kai2 gi|453056153|pdb|4HTA|A Chain A, The Structure Of The Karrikin Insensitive (kai2) Protein In Arabidopsis Thaliana Length = 288 Score = 184 bits (466), Expect = 8e-45 Identities = 79/103 (76%), Positives = 98/103 (95%) Frame = -1 Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130 MG++EEAHN++V+G+G+ IVLGHGFGTDQSVWKHLVPHL++DYRV+LYDNMGAGTTNPD Sbjct: 19 MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 78 Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1 YFDFDRYS LEGY+ DL+AILE+L++ SCIFVGHSV+AM+G++ Sbjct: 79 YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVL 121 >pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like (atd14l) Length = 272 Score = 184 bits (466), Expect = 8e-45 Identities = 79/103 (76%), Positives = 98/103 (95%) Frame = -1 Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130 MG++EEAHN++V+G+G+ IVLGHGFGTDQSVWKHLVPHL++DYRV+LYDNMGAGTTNPD Sbjct: 3 MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 62 Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1 YFDFDRYS LEGY+ DL+AILE+L++ SCIFVGHSV+AM+G++ Sbjct: 63 YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVL 105 >ref|NP_195463.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gi|444302309|pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From Arabidopsis Thaliana gi|4468813|emb|CAB38214.1| putative protein [Arabidopsis thaliana] gi|7270729|emb|CAB80412.1| putative protein [Arabidopsis thaliana] gi|15810303|gb|AAL07039.1| unknown protein [Arabidopsis thaliana] gi|20259141|gb|AAM14286.1| unknown protein [Arabidopsis thaliana] gi|332661398|gb|AEE86798.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] Length = 270 Score = 184 bits (466), Expect = 8e-45 Identities = 79/103 (76%), Positives = 98/103 (95%) Frame = -1 Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130 MG++EEAHN++V+G+G+ IVLGHGFGTDQSVWKHLVPHL++DYRV+LYDNMGAGTTNPD Sbjct: 1 MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 60 Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1 YFDFDRYS LEGY+ DL+AILE+L++ SCIFVGHSV+AM+G++ Sbjct: 61 YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVL 103 >ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus communis] gi|223535801|gb|EEF37463.1| sigma factor sigb regulation protein rsbq, putative [Ricinus communis] Length = 270 Score = 183 bits (465), Expect = 1e-44 Identities = 80/103 (77%), Positives = 98/103 (95%) Frame = -1 Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130 MGI+EEAHN+++LGTG+ +IVL HGFGTDQSVWKHLVPHLI+D++V+L+DNMGAGTTNPD Sbjct: 1 MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60 Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1 YFDF+RY+ LEGYA DLLAILEELQ+ SC+FVGHSV+AMVG++ Sbjct: 61 YFDFERYAGLEGYAYDLLAILEELQVESCVFVGHSVSAMVGVV 103 >gb|AFK41000.1| unknown [Medicago truncatula] Length = 270 Score = 182 bits (462), Expect = 2e-44 Identities = 82/103 (79%), Positives = 97/103 (94%) Frame = -1 Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130 MGI+EEAHN++VLG+G IVL HGFGTDQSVWKHLVPHL++++RVILYDNMGAGTTNPD Sbjct: 1 MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60 Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1 YFDF+RYSTLEGYA DLLAILEEL+++SCIFVGHSV+AM+G + Sbjct: 61 YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTV 103