BLASTX nr result

ID: Cimicifuga21_contig00023110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023110
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4...   184   8e-45
pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dw...   184   8e-45
ref|NP_195463.1| hydrolase, alpha/beta fold family protein [Arab...   184   8e-45
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   183   1e-44
gb|AFK41000.1| unknown [Medicago truncatula]                          182   2e-44

>pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4HRY|A Chain A,
           The Structure Of Arabidopsis Thaliana Kai2
           gi|453056153|pdb|4HTA|A Chain A, The Structure Of The
           Karrikin Insensitive (kai2) Protein In Arabidopsis
           Thaliana
          Length = 288

 Score =  184 bits (466), Expect = 8e-45
 Identities = 79/103 (76%), Positives = 98/103 (95%)
 Frame = -1

Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130
           MG++EEAHN++V+G+G+  IVLGHGFGTDQSVWKHLVPHL++DYRV+LYDNMGAGTTNPD
Sbjct: 19  MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 78

Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1
           YFDFDRYS LEGY+ DL+AILE+L++ SCIFVGHSV+AM+G++
Sbjct: 79  YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVL 121


>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
           (atd14l)
          Length = 272

 Score =  184 bits (466), Expect = 8e-45
 Identities = 79/103 (76%), Positives = 98/103 (95%)
 Frame = -1

Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130
           MG++EEAHN++V+G+G+  IVLGHGFGTDQSVWKHLVPHL++DYRV+LYDNMGAGTTNPD
Sbjct: 3   MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 62

Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1
           YFDFDRYS LEGY+ DL+AILE+L++ SCIFVGHSV+AM+G++
Sbjct: 63  YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVL 105


>ref|NP_195463.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana]
           gi|444302309|pdb|4IH1|A Chain A, Crystal Structure Of
           Karrikin Insensitive 2 (kai2) From Arabidopsis Thaliana
           gi|4468813|emb|CAB38214.1| putative protein [Arabidopsis
           thaliana] gi|7270729|emb|CAB80412.1| putative protein
           [Arabidopsis thaliana] gi|15810303|gb|AAL07039.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259141|gb|AAM14286.1| unknown protein [Arabidopsis
           thaliana] gi|332661398|gb|AEE86798.1| hydrolase,
           alpha/beta fold family protein [Arabidopsis thaliana]
          Length = 270

 Score =  184 bits (466), Expect = 8e-45
 Identities = 79/103 (76%), Positives = 98/103 (95%)
 Frame = -1

Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130
           MG++EEAHN++V+G+G+  IVLGHGFGTDQSVWKHLVPHL++DYRV+LYDNMGAGTTNPD
Sbjct: 1   MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 60

Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1
           YFDFDRYS LEGY+ DL+AILE+L++ SCIFVGHSV+AM+G++
Sbjct: 61  YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVL 103


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  183 bits (465), Expect = 1e-44
 Identities = 80/103 (77%), Positives = 98/103 (95%)
 Frame = -1

Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130
           MGI+EEAHN+++LGTG+ +IVL HGFGTDQSVWKHLVPHLI+D++V+L+DNMGAGTTNPD
Sbjct: 1   MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60

Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1
           YFDF+RY+ LEGYA DLLAILEELQ+ SC+FVGHSV+AMVG++
Sbjct: 61  YFDFERYAGLEGYAYDLLAILEELQVESCVFVGHSVSAMVGVV 103


>gb|AFK41000.1| unknown [Medicago truncatula]
          Length = 270

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/103 (79%), Positives = 97/103 (94%)
 Frame = -1

Query: 309 MGILEEAHNIRVLGTGDNIIVLGHGFGTDQSVWKHLVPHLINDYRVILYDNMGAGTTNPD 130
           MGI+EEAHN++VLG+G   IVL HGFGTDQSVWKHLVPHL++++RVILYDNMGAGTTNPD
Sbjct: 1   MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 129 YFDFDRYSTLEGYACDLLAILEELQLNSCIFVGHSVAAMVGII 1
           YFDF+RYSTLEGYA DLLAILEEL+++SCIFVGHSV+AM+G +
Sbjct: 61  YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTV 103


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