BLASTX nr result

ID: Cimicifuga21_contig00023095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023095
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29287.3| unnamed protein product [Vitis vinifera]              282   1e-73
ref|XP_002273831.1| PREDICTED: TVP38/TMEM64 family membrane prot...   282   1e-73
ref|XP_002297894.1| predicted protein [Populus trichocarpa] gi|2...   281   2e-73
ref|XP_002512701.1| conserved hypothetical protein [Ricinus comm...   281   2e-73
ref|XP_002273872.1| PREDICTED: TVP38/TMEM64 family membrane prot...   277   4e-72

>emb|CBI29287.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  282 bits (721), Expect = 1e-73
 Identities = 145/245 (59%), Positives = 179/245 (73%), Gaps = 8/245 (3%)
 Frame = -2

Query: 885 LSQKYG--FDKDEILHIFRDLSDRLGFWAIPIYVLIHTVTLALCLPYAVFFEAGASLLFG 712
           LS++YG  +DKD  + +FR  SDRLG+WAIP+YV IHT+TLALCLP AVF EA ASLLFG
Sbjct: 195 LSRRYGLEWDKDAAVELFRQWSDRLGYWAIPLYVSIHTLTLALCLPSAVFLEAAASLLFG 254

Query: 711 FFPAVICVFCAKILGASLSFWIGRLVFRSSTSTMEWIQKNKYFHILAKGVERDGWKFVLL 532
           F PAV+CVF AK+LGASLSFWIGRL+FRSS++ MEW Q NKYFH+L++GVERDGW+FVLL
Sbjct: 255 FLPAVLCVFSAKLLGASLSFWIGRLIFRSSSTAMEWAQGNKYFHLLSRGVERDGWRFVLL 314

Query: 531 ARFSPMPSYIINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXXXXXXXXSHK 352
           ARFSP+PSY+INY LAATKVGF++DFLLPSVIGCLPMI+QNT               S K
Sbjct: 315 ARFSPIPSYVINYALAATKVGFILDFLLPSVIGCLPMILQNTSIGSLAGAAVATASGSQK 374

Query: 351 SQVFSYLFPXXXXXXXXXXXXXXXXXXSELSVDEPST------CKDTVSSSQDSLRRTGS 190
           SQV+SY+FP                  +++SV + S+      C +TV SSQ +L R G+
Sbjct: 375 SQVWSYVFPLLGIVSSILISLRIKKYSTDISVIQSSSSEDIHDCNNTVESSQ-TLSRKGN 433

Query: 189 EGLRK 175
           + + K
Sbjct: 434 KNMEK 438


>ref|XP_002273831.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 isoform 1
           [Vitis vinifera]
          Length = 264

 Score =  282 bits (721), Expect = 1e-73
 Identities = 145/245 (59%), Positives = 179/245 (73%), Gaps = 8/245 (3%)
 Frame = -2

Query: 885 LSQKYG--FDKDEILHIFRDLSDRLGFWAIPIYVLIHTVTLALCLPYAVFFEAGASLLFG 712
           LS++YG  +DKD  + +FR  SDRLG+WAIP+YV IHT+TLALCLP AVF EA ASLLFG
Sbjct: 19  LSRRYGLEWDKDAAVELFRQWSDRLGYWAIPLYVSIHTLTLALCLPSAVFLEAAASLLFG 78

Query: 711 FFPAVICVFCAKILGASLSFWIGRLVFRSSTSTMEWIQKNKYFHILAKGVERDGWKFVLL 532
           F PAV+CVF AK+LGASLSFWIGRL+FRSS++ MEW Q NKYFH+L++GVERDGW+FVLL
Sbjct: 79  FLPAVLCVFSAKLLGASLSFWIGRLIFRSSSTAMEWAQGNKYFHLLSRGVERDGWRFVLL 138

Query: 531 ARFSPMPSYIINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXXXXXXXXSHK 352
           ARFSP+PSY+INY LAATKVGF++DFLLPSVIGCLPMI+QNT               S K
Sbjct: 139 ARFSPIPSYVINYALAATKVGFILDFLLPSVIGCLPMILQNTSIGSLAGAAVATASGSQK 198

Query: 351 SQVFSYLFPXXXXXXXXXXXXXXXXXXSELSVDEPST------CKDTVSSSQDSLRRTGS 190
           SQV+SY+FP                  +++SV + S+      C +TV SSQ +L R G+
Sbjct: 199 SQVWSYVFPLLGIVSSILISLRIKKYSTDISVIQSSSSEDIHDCNNTVESSQ-TLSRKGN 257

Query: 189 EGLRK 175
           + + K
Sbjct: 258 KNMEK 262


>ref|XP_002297894.1| predicted protein [Populus trichocarpa] gi|222845152|gb|EEE82699.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  281 bits (719), Expect = 2e-73
 Identities = 133/189 (70%), Positives = 158/189 (83%)
 Frame = -2

Query: 891 RSLSQKYGFDKDEILHIFRDLSDRLGFWAIPIYVLIHTVTLALCLPYAVFFEAGASLLFG 712
           R LS+++G+DKD  L +  + SDRLG WA+P+YV IHT++LALCLP AVFFEAGASLLFG
Sbjct: 18  RELSKQFGWDKDAALELLGEWSDRLGVWAMPVYVGIHTISLALCLPCAVFFEAGASLLFG 77

Query: 711 FFPAVICVFCAKILGASLSFWIGRLVFRSSTSTMEWIQKNKYFHILAKGVERDGWKFVLL 532
           F PAV+CVF AK+LGASLSFWIGRLVFRSS+S MEW+Q NKYFH+L++GVE+DGWKFVLL
Sbjct: 78  FLPAVLCVFFAKVLGASLSFWIGRLVFRSSSSAMEWVQSNKYFHLLSRGVEKDGWKFVLL 137

Query: 531 ARFSPMPSYIINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXXXXXXXXSHK 352
           ARFSPMPSY+INY LAATKVGF+VDFLLP+V+GCLPMI+QNT               S K
Sbjct: 138 ARFSPMPSYLINYALAATKVGFMVDFLLPTVVGCLPMILQNTSIGSLAGAAVASASGSKK 197

Query: 351 SQVFSYLFP 325
           SQ++SYLFP
Sbjct: 198 SQIWSYLFP 206


>ref|XP_002512701.1| conserved hypothetical protein [Ricinus communis]
           gi|223548662|gb|EEF50153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 264

 Score =  281 bits (718), Expect = 2e-73
 Identities = 145/246 (58%), Positives = 176/246 (71%), Gaps = 5/246 (2%)
 Frame = -2

Query: 891 RSLSQKYGFDKDEILHIFRDLSDRLGFWAIPIYVLIHTVTLALCLPYAVFFEAGASLLFG 712
           R L ++ G+DK+  L +F + SD LG WA+PIYV IHT+TLALCLPYAVFFEA A LLFG
Sbjct: 19  RELIKQTGWDKEAALKVFAEWSDGLGIWAMPIYVGIHTLTLALCLPYAVFFEAAAPLLFG 78

Query: 711 FFPAVICVFCAKILGASLSFWIGRLVFRSSTSTMEWIQKNKYFHILAKGVERDGWKFVLL 532
           F PAV+CVF AK+LGASLSFWIGRLVFRSS+S MEW Q+NKYFH+L+KGVE+DGW+FVLL
Sbjct: 79  FMPAVLCVFSAKLLGASLSFWIGRLVFRSSSSAMEWAQRNKYFHLLSKGVEQDGWRFVLL 138

Query: 531 ARFSPMPSYIINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXXXXXXXXSHK 352
           ARFSPMPSY+INY LAATKV FLVDFLLP++IGCLPMI+QNT               S K
Sbjct: 139 ARFSPMPSYVINYALAATKVEFLVDFLLPTIIGCLPMILQNTSIGSLAGAAVASTSGSQK 198

Query: 351 SQVFSYLFPXXXXXXXXXXXXXXXXXXSELSVDEPS-----TCKDTVSSSQDSLRRTGSE 187
           S+V+SYLFP                  S++++ E S     T  + V SS+D    TG +
Sbjct: 199 SKVWSYLFPLLGIISSILISMRIKKYSSDITMVESSPSNHTTDSNDVDSSKDLSGNTGGD 258

Query: 186 GLRKKQ 169
           GL+K +
Sbjct: 259 GLKKSR 264


>ref|XP_002273872.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 isoform 2
           [Vitis vinifera]
          Length = 264

 Score =  277 bits (708), Expect = 4e-72
 Identities = 143/245 (58%), Positives = 176/245 (71%), Gaps = 8/245 (3%)
 Frame = -2

Query: 885 LSQKYG--FDKDEILHIFRDLSDRLGFWAIPIYVLIHTVTLALCLPYAVFFEAGASLLFG 712
           LS++YG  +DKD  + +FR  SDRLG+WAIP+YV IHT+TLALCLP AVF EA ASLLFG
Sbjct: 19  LSRRYGLEWDKDAAVELFRQWSDRLGYWAIPLYVSIHTLTLALCLPSAVFLEAAASLLFG 78

Query: 711 FFPAVICVFCAKILGASLSFWIGRLVFRSSTSTMEWIQKNKYFHILAKGVERDGWKFVLL 532
           F PAV+CVF AK+LGASLSFWIGR VF+ S + MEW Q NKYFH+L++GVERDGW+FVLL
Sbjct: 79  FLPAVLCVFSAKLLGASLSFWIGRFVFKRSLTAMEWAQGNKYFHLLSRGVERDGWRFVLL 138

Query: 531 ARFSPMPSYIINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXXXXXXXXSHK 352
           ARFSP+PSY+INY LAATKVGF++DFLLPSVIGCLPMI+QNT               S K
Sbjct: 139 ARFSPIPSYVINYALAATKVGFILDFLLPSVIGCLPMILQNTSIGSLAGAAVATASGSQK 198

Query: 351 SQVFSYLFPXXXXXXXXXXXXXXXXXXSELSVDEPST------CKDTVSSSQDSLRRTGS 190
           SQV+SY+FP                  +++SV + S+      C +TV SSQ +L R G+
Sbjct: 199 SQVWSYVFPLLGIVSSILISLRIKKYSTDISVIQSSSSEDIHDCNNTVESSQ-TLSRKGN 257

Query: 189 EGLRK 175
           + + K
Sbjct: 258 KNMEK 262


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