BLASTX nr result

ID: Cimicifuga21_contig00023093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023093
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   112   4e-23
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]   110   1e-22
emb|CAN63753.1| hypothetical protein VITISV_005664 [Vitis vinifera]   107   8e-22
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   103   1e-20
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...   103   2e-20

>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/102 (52%), Positives = 70/102 (68%)
 Frame = -3

Query: 310  QFVSSPRSDHMLVIKRILRYLKSSHEFGIVFQLFNKVFSLHAYFDADWGGSSDTRRSMIG 131
            QF+ +P  DH L +KRILRY+K +  FG+ F+      +L AY DADW G  DTRRS  G
Sbjct: 1020 QFLHAPTIDHFLAVKRILRYVKGTLHFGLTFRPSTIPSALVAYSDADWAGCPDTRRSTSG 1079

Query: 130  YCVFLGPNLISWTAKK*PTVSRSNA*SKYRSLVHVCAETVWL 5
            Y ++LG NL+SW+AKK PTVSRS+  S+YR+L    AE +WL
Sbjct: 1080 YSIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELLWL 1121


>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
          Length = 1207

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/102 (52%), Positives = 69/102 (67%)
 Frame = -3

Query: 310  QFVSSPRSDHMLVIKRILRYLKSSHEFGIVFQLFNKVFSLHAYFDADWGGSSDTRRSMIG 131
            QF+ +P  DH L +KRILRY+K +  FG+ F       +L AY DADW G  DTRRS  G
Sbjct: 1041 QFLHAPTIDHFLAVKRILRYVKGTLHFGLTFCPSTIPSALVAYSDADWAGCPDTRRSTSG 1100

Query: 130  YCVFLGPNLISWTAKK*PTVSRSNA*SKYRSLVHVCAETVWL 5
            Y ++LG NL+SW+AKK PTVSRS+  S+YR+L    AE +WL
Sbjct: 1101 YSIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELLWL 1142


>emb|CAN63753.1| hypothetical protein VITISV_005664 [Vitis vinifera]
          Length = 439

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/102 (51%), Positives = 67/102 (65%)
 Frame = -3

Query: 310 QFVSSPRSDHMLVIKRILRYLKSSHEFGIVFQLFNKVFSLHAYFDADWGGSSDTRRSMIG 131
           QF+ SP  DH L IKRILRY+KS+  FG+       + +L AYFD DW G  DTRRS  G
Sbjct: 311 QFLHSPTEDHFLAIKRILRYVKSTLHFGLTLHPSAALGALVAYFDVDWAGCLDTRRSTSG 370

Query: 130 YCVFLGPNLISWTAKK*PTVSRSNA*SKYRSLVHVCAETVWL 5
           Y ++L  NL+SW+AKK PTVS S+  S+Y +L    AE +WL
Sbjct: 371 YSIYLSDNLVSWSAKKQPTVSYSSCESEYHALTLTIAELLWL 412


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 978

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/101 (51%), Positives = 68/101 (67%)
 Frame = -3

Query: 307  FVSSPRSDHMLVIKRILRYLKSSHEFGIVFQLFNKVFSLHAYFDADWGGSSDTRRSMIGY 128
            F+  PR  H+ +IKRILRY+K +   G+       V SL AY  ADW G  D+RRS  GY
Sbjct: 825  FMHDPREPHLALIKRILRYIKGTLHIGLHLGT-TLVDSLTAYSHADWAGCPDSRRSTSGY 883

Query: 127  CVFLGPNLISWTAKK*PTVSRSNA*SKYRSLVHVCAETVWL 5
            CVFLG NL+SW++K+  TVSRS+A ++YR++ HV AE  WL
Sbjct: 884  CVFLGDNLVSWSSKRRTTVSRSSAEAEYRAVAHVVAECCWL 924


>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
           gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
           [Oryza sativa Japonica Group]
          Length = 841

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/101 (50%), Positives = 67/101 (66%)
 Frame = -3

Query: 307 FVSSPRSDHMLVIKRILRYLKSSHEFGIVFQLFNKVFSLHAYFDADWGGSSDTRRSMIGY 128
           F+  PR  H+ +IKRILRY+K +   G+       V SL AY DADW G  D+ RS  GY
Sbjct: 642 FMHDPREPHLALIKRILRYIKGTLHIGLHLGT-TPVDSLTAYSDADWAGCPDSHRSTSGY 700

Query: 127 CVFLGPNLISWTAKK*PTVSRSNA*SKYRSLVHVCAETVWL 5
           CVFLG NL+SW++K+  TVSRS+A ++YR++ H  AE  WL
Sbjct: 701 CVFLGDNLVSWSSKRQTTVSRSSAEAEYRAVAHAIAECCWL 741


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