BLASTX nr result

ID: Cimicifuga21_contig00023077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023077
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001695290.1| arogenate/prephenate dehydrogenase [Chlamydo...    66   3e-09
ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloro...    61   8e-08
ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group] g...    60   1e-07
ref|XP_002945921.1| arogenate/prephenate dehydrogenase [Volvox c...    59   5e-07
gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indi...    58   9e-07

>ref|XP_001695290.1| arogenate/prephenate dehydrogenase [Chlamydomonas reinhardtii]
           gi|158275773|gb|EDP01548.1| arogenate/prephenate
           dehydrogenase [Chlamydomonas reinhardtii]
          Length = 403

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/100 (37%), Positives = 54/100 (54%)
 Frame = -3

Query: 407 LYDGLFLYNVNATKQLEKLDRAFDTVKHNLFGKLRDRYRQQMEETVEIEKTNEFESKPAT 228
           LY GLFLYN NAT +LE+L++AFDTVK  LFG+L D  RQQ+  TV+ +      + P  
Sbjct: 307 LYYGLFLYNQNATDELERLEQAFDTVKKQLFGRLHDIARQQLFPTVDSQGNGNGAAAPPP 366

Query: 227 PFLPASEKVLKDLSSFSKVPERQSRDASVELKTEVYRTAQ 108
             LP   + L        +P R   +   +  ++ Y  ++
Sbjct: 367 QALPPPREPL-------ALPSRSRDEVMAQAPSDAYSASK 399


>ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 361

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 407 LYDGLFLYNVNATKQLEKLDRAFDTVKHNLFGKLRDRYRQQMEETVEI 264
           LY GLF+YNVNAT+Q+EKL+RAF+ VK  L+G+L D  R+Q+ E V I
Sbjct: 314 LYYGLFMYNVNATEQIEKLERAFEKVKQMLYGRLHDILRKQIVERVPI 361


>ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group]
           gi|53793078|dbj|BAD54288.1| putative arogenate
           dehydrogenase isoform 2 [Oryza sativa Japonica Group]
           gi|113595847|dbj|BAF19721.1| Os06g0542200 [Oryza sativa
           Japonica Group] gi|215765048|dbj|BAG86745.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222635711|gb|EEE65843.1| hypothetical protein
           OsJ_21611 [Oryza sativa Japonica Group]
          Length = 342

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -3

Query: 407 LYDGLFLYNVNATKQLEKLDRAFDTVKHNLFGKLRDRYRQQMEETVEI 264
           LY GLF+YNVNAT+Q++ LDRAF+ VK  L+G+L +  R+Q+EE V I
Sbjct: 294 LYYGLFMYNVNATEQIDNLDRAFEKVKQMLYGRLHNVLRKQIEERVPI 341


>ref|XP_002945921.1| arogenate/prephenate dehydrogenase [Volvox carteri f. nagariensis]
           gi|300268736|gb|EFJ52916.1| arogenate/prephenate
           dehydrogenase [Volvox carteri f. nagariensis]
          Length = 327

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
 Frame = -3

Query: 407 LYDGLFLYNVNATKQLEKLDRAFDTVKHNLFGKLRDRYRQQMEETVEIEK--------TN 252
           LY GLFLYN NAT +LE+L++AFDTVK  LFG+L D  R Q+    E+ K          
Sbjct: 231 LYYGLFLYNQNATDELERLEKAFDTVKKQLFGRLHDIARAQLFPMEEMGKGPSGNGNGNG 290

Query: 251 EFESKPATPFLPASEKVL 198
           +  +    P LPA+ + L
Sbjct: 291 KAAATAPVPALPAAREPL 308


>gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indica Group]
          Length = 342

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -3

Query: 407 LYDGLFLYNVNATKQLEKLDRAFDTVKHNLFGKLRDRYRQQMEETVEI 264
           LY GLF+YNVNAT+Q++ LDRAF+ VK  L+G+L +  R+Q+ E V I
Sbjct: 294 LYYGLFMYNVNATEQIDNLDRAFEKVKQMLYGRLHNVLRKQIVERVPI 341


Top