BLASTX nr result

ID: Cimicifuga21_contig00023076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023076
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [...   317   3e-84
emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera]   313   3e-83
ref|XP_002313579.1| predicted protein [Populus trichocarpa] gi|2...   286   7e-75
ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago ...   279   7e-73
ref|XP_002525357.1| nucleic acid binding protein, putative [Rici...   278   1e-72

>ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [Vitis vinifera]
           gi|297739067|emb|CBI28556.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  317 bits (812), Expect = 3e-84
 Identities = 162/230 (70%), Positives = 180/230 (78%), Gaps = 1/230 (0%)
 Frame = +3

Query: 24  MPRNRDEPPAVRVYTVCDESRYLIVKNVPALGCGDDLLKLFQSYGEVEECKPMDEEDCEP 203
           M +NRDEPPAVRVYT+CDESRYLIV+NVPALGCGDDLL LF SYG++EECKPMD EDCEP
Sbjct: 1   MTQNRDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLNLFASYGDIEECKPMDAEDCEP 60

Query: 204 YTDVYWIKFLQVSSARFAKRKLDEFVFLGNRLQVSYAPHFESLFDTKEKLECRRREVLKR 383
           +TDVYWIKF  VS+ARFAKRKLDEFVFLGNRL+V YAPHFESL DTKEKLE RR+EVL R
Sbjct: 61  FTDVYWIKFRLVSNARFAKRKLDEFVFLGNRLKVEYAPHFESLSDTKEKLEGRRKEVLSR 120

Query: 384 LNSGKSNVSTNHNQDPXXXXXXXXXXXXXXXISKQIN-SKREYVESEHAYGKEDPPFTRV 560
           LN G+S + T HN D                ISKQ++ ++R   ES+H    +D   T V
Sbjct: 121 LNPGRSKMPTVHNPDALGEPLLVKNPSQTNCISKQMSFNQRISGESDHVSRIKDSSITTV 180

Query: 561 SSNEDYFASPSMNNTVNLVREKLDKIQSSSSHLEAGLASKKARVDNRRRI 710
           SSN+DYF SPSMN TV LVREKLDKIQSSS HLEAG A KK RVDNRRRI
Sbjct: 181 SSNQDYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230


>emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera]
          Length = 230

 Score =  313 bits (803), Expect = 3e-83
 Identities = 160/230 (69%), Positives = 178/230 (77%), Gaps = 1/230 (0%)
 Frame = +3

Query: 24  MPRNRDEPPAVRVYTVCDESRYLIVKNVPALGCGDDLLKLFQSYGEVEECKPMDEEDCEP 203
           M +NRDEPPAVRVYT+CDESRYLIV+NVPALGCGDDLL LF SYG++EECKPMD EDCEP
Sbjct: 1   MTQNRDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLNLFASYGDIEECKPMDAEDCEP 60

Query: 204 YTDVYWIKFLQVSSARFAKRKLDEFVFLGNRLQVSYAPHFESLFDTKEKLECRRREVLKR 383
           +TDVYW KF  VS+ARFAKRKLDEFVFLGNRL+  YAPHFESL DTKEKLE RR+EVL R
Sbjct: 61  FTDVYWXKFRLVSNARFAKRKLDEFVFLGNRLKAEYAPHFESLSDTKEKLEGRRKEVLSR 120

Query: 384 LNSGKSNVSTNHNQDPXXXXXXXXXXXXXXXISKQIN-SKREYVESEHAYGKEDPPFTRV 560
           LN G+S + T HN D                ISKQ++ ++R   ES+H    +D   T V
Sbjct: 121 LNPGRSKMPTVHNPDALGEPLLVKNPSQTNCISKQMSFNQRISGESDHVSRIKDSSITTV 180

Query: 561 SSNEDYFASPSMNNTVNLVREKLDKIQSSSSHLEAGLASKKARVDNRRRI 710
           SSN+DYF SPSMN TV LVREKLDKIQSSS HLEAG A KK RVDNRRRI
Sbjct: 181 SSNQDYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230


>ref|XP_002313579.1| predicted protein [Populus trichocarpa] gi|222849987|gb|EEE87534.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  286 bits (731), Expect = 7e-75
 Identities = 150/235 (63%), Positives = 174/235 (74%), Gaps = 6/235 (2%)
 Frame = +3

Query: 24  MPRNRD----EPPAVRVYTVCDESRYLIVKNVPALGCGDDLLKLFQSYGEVEECKPMDEE 191
           +PRNRD     P  VRVYTVCDESRYLIV+NVPALGCGDDL KLF SYG+VEECKPMD E
Sbjct: 2   LPRNRDCSPPHPTVVRVYTVCDESRYLIVRNVPALGCGDDLFKLFASYGDVEECKPMDAE 61

Query: 192 DCEPYTDVYWIKFLQVSSARFAKRKLDEFVFLGNRLQVSYAPHFESLFDTKEKLECRRRE 371
           DCE +TDVYWIKF  VS+ARFAKRKLDE +FLGN LQVSYAPHFE++ DTK+KLE RR+E
Sbjct: 62  DCEQFTDVYWIKFRLVSNARFAKRKLDESIFLGNPLQVSYAPHFETVSDTKDKLEGRRKE 121

Query: 372 VLKRLNSGKSNVSTNHNQDPXXXXXXXXXXXXXXXISKQINSKREY--VESEHAYGKEDP 545
           V  RLN G++     HN                  +S+ +NS + +   ES++ +   DP
Sbjct: 122 VFARLNPGRTKGPKVHN--AGTSSQASLLTSQIDHVSQHLNSNQSWDSGESQNVHQIGDP 179

Query: 546 PFTRVSSNEDYFASPSMNNTVNLVREKLDKIQSSSSHLEAGLASKKARVDNRRRI 710
           P TRVSS++DYF S SMN TV LVREKL+KIQSSS HL+AG  SKKARVDNRRRI
Sbjct: 180 PITRVSSDQDYFPSQSMNQTVRLVREKLNKIQSSSEHLQAGPVSKKARVDNRRRI 234


>ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago truncatula]
           gi|355517583|gb|AES99206.1| hypothetical protein
           MTR_5g077780 [Medicago truncatula]
          Length = 222

 Score =  279 bits (714), Expect = 7e-73
 Identities = 146/229 (63%), Positives = 168/229 (73%)
 Frame = +3

Query: 24  MPRNRDEPPAVRVYTVCDESRYLIVKNVPALGCGDDLLKLFQSYGEVEECKPMDEEDCEP 203
           MPR +DE PAVRVYTVCDESRYLIV+NVPALGCG+DL++LF +YGEVEECKPMD EDCE 
Sbjct: 1   MPRYKDESPAVRVYTVCDESRYLIVRNVPALGCGNDLMQLFSTYGEVEECKPMDAEDCEQ 60

Query: 204 YTDVYWIKFLQVSSARFAKRKLDEFVFLGNRLQVSYAPHFESLFDTKEKLECRRREVLKR 383
           +TDVYWIKF   S+ARFAKRKLDEFVFLGNRLQVSYAPHFESL DTK+KLE RR+EVL R
Sbjct: 61  FTDVYWIKFHLFSNARFAKRKLDEFVFLGNRLQVSYAPHFESLSDTKDKLEGRRKEVLAR 120

Query: 384 LNSGKSNVSTNHNQDPXXXXXXXXXXXXXXXISKQINSKREYVESEHAYGKEDPPFTRVS 563
           LN  +   +   +  P                S+ ++  +   E E      + P   VS
Sbjct: 121 LNPRRPKDTIASSSRPLITSNTSCQ-------SEHLDPNQSSQEFEVRSNNSNLPKRTVS 173

Query: 564 SNEDYFASPSMNNTVNLVREKLDKIQSSSSHLEAGLASKKARVDNRRRI 710
           SNEDYF+S SMN TV +VR+KLDKIQSS  HL+AG  SKKARVDNRRRI
Sbjct: 174 SNEDYFSSHSMNQTVRVVRDKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222


>ref|XP_002525357.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535320|gb|EEF36995.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 216

 Score =  278 bits (712), Expect = 1e-72
 Identities = 146/230 (63%), Positives = 171/230 (74%), Gaps = 1/230 (0%)
 Frame = +3

Query: 24  MPRNRDEPPAVRVYTVCDESRYLIVKNVPALGCGDDLLKLFQSYGEVEECKPMDEEDCEP 203
           MPR +DE PA+RVYT+CDESRYLIV+NVPALGCGDDLLKLF SYG+VE+ KPMD EDC+ 
Sbjct: 1   MPRYKDEAPAIRVYTICDESRYLIVRNVPALGCGDDLLKLFASYGDVEDFKPMDAEDCDQ 60

Query: 204 YTDVYWIKFLQVSSARFAKRKLDEFVFLGNRLQVSYAPHFESLFDTKEKLECRRREVLKR 383
           +TDVYWIKF  V +ARFAKRKLDE+VF+GNRLQVSYAPHFE+L DTK+KLE R +EVL R
Sbjct: 61  FTDVYWIKFSLVCNARFAKRKLDEYVFMGNRLQVSYAPHFETLSDTKDKLEGRIKEVLSR 120

Query: 384 LNSGKSNVSTNHNQDPXXXXXXXXXXXXXXXISKQINSKREYVESEHAYGK-EDPPFTRV 560
           LN G+S  S   N                      + +  E   S+H   +  DPP TRV
Sbjct: 121 LNPGRSKGSRVQNPGASN--------------EASLLAAVESAGSQHNKSQINDPPITRV 166

Query: 561 SSNEDYFASPSMNNTVNLVREKLDKIQSSSSHLEAGLASKKARVDNRRRI 710
           SSN++YF S SMN TV+LVREKL+KIQSSS HL+A  ASKK+RVDNRRRI
Sbjct: 167 SSNQEYFPSQSMNQTVSLVREKLNKIQSSSEHLQAVPASKKSRVDNRRRI 216


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